| Miscellaneous |
| Version lineage of this tool (guids ordered most recent to oldest) |
| toolshed.g2.bx.psu.edu/repos/nml/kat_sect/kat_sect/2.3.2 (this tool) |
| toolshed.g2.bx.psu.edu/repos/nml/kat_sect/kat_sect/2.3.1 |
| toolshed.g2.bx.psu.edu/repos/nml/kat_sect/kat_sect/1.3.0 |
| kat_sect |
| Requirements (dependencies defined in the <requirements> tag set) |
| name | version | type |
| kat | 2.3.1 | package |
| Functional tests |
| name | inputs | outputs | required files |
| Test-1 |
keep_counts: False db: db.fasta single_or_paired|input_se: input.fastq |
stats: kat-sect-stats.tsv |
input.fastq db.fasta kat-sect-stats.tsv |
| Test-2 |
keep_counts: True db: db.fasta single_or_paired|input_se: input.fastq |
stats: kat-sect-stats.tsv counts: kat-sect-counts.cvg |
input.fastq db.fasta kat-sect-stats.tsv kat-sect-counts.cvg |