| Miscellaneous |
| Version lineage of this tool (guids ordered most recent to oldest) |
| toolshed.g2.bx.psu.edu/repos/iuc/checkm_taxonomy_wf/checkm_taxonomy_wf/1.2.3+galaxy0 |
| toolshed.g2.bx.psu.edu/repos/iuc/checkm_taxonomy_wf/checkm_taxonomy_wf/1.2.0+galaxy0 (this tool) |
| checkm_taxonomy_wf |
| Requirements (dependencies defined in the <requirements> tag set) |
| name | version | type |
| checkm-genome | 1.2.0 | package |
| Functional tests |
| name | inputs | outputs | required files |
| Test-1 |
rank_taxon|taxon: Prokaryote rank_taxon|rank: life bins|bins_coll: list collection bins|select: collection analyze|ali: False analyze|nt: False analyze|genes: False qa|individual_markers: False qa|skip_adj_correction: False qa|skip_pseudogene_correction: False qa|aai_strain: 0.9 qa|ignore_thresholds: False qa|e_value: 1e-10 qa|length: 0.7 extra_outputs: |
name: value |
637000110.fna value |
| Test-2 |
rank_taxon|taxon: Prokaryote rank_taxon|rank: life bins|bins_coll: list collection bins|select: collection analyze|ali: True analyze|nt: False analyze|genes: False qa|individual_markers: False qa|skip_adj_correction: False qa|skip_pseudogene_correction: False qa|aai_strain: 0.9 qa|ignore_thresholds: False qa|e_value: 1e-10 qa|length: 0.7 extra_outputs: ['marker_file', 'hmmer_analyze', 'hmmer_analyze_ali', 'bin_stats_analyze', 'bin_stats_ext', 'checkm_hmm_info', 'marker_gene_stats'] |
name: value name: value name: value name: value name: value name: value |
637000110.fna value |