| Miscellaneous |
| Version lineage of this tool (guids ordered most recent to oldest) |
| toolshed.g2.bx.psu.edu/repos/jay/pdaug_sequence_property_based_descriptors/pdaug_sequence_property_based_descriptors/0.1.0 (this tool) |
| pdaug_sequence_property_based_descriptors |
| Requirements (dependencies defined in the <requirements> tag set) |
| name | version | type |
| python | 2.7.18 | package |
| pandas | 0.24.2 | package |
| pydpi | 1.0 | package |
| Additional information about this tool |
python '$__tool_directory__/PDAUG_Sequence_Property_Based_Descriptors.py' --InFile '$input1'
--DesType '$SelectDiscriptor.DesType'
#if $SelectDiscriptor.DesType == 'GetPAAC'
--Lamda '$SelectDiscriptor.Lamda'
--Weight '$SelectDiscriptor.Weight'
#end if
#if $SelectDiscriptor.DesType == 'GetAPAAC'
--Lamda '$SelectDiscriptor.Lamda'
--Weight '$SelectDiscriptor.Weight'
#end if
#if $SelectDiscriptor.DesType == 'GetSOCN'
--MaxLag '$SelectDiscriptor.MaxLag'
#end if
#if $SelectDiscriptor.DesType =='GetQSO'
--MaxLag '$SelectDiscriptor.MaxLag'
--Weight '$SelectDiscriptor.Weight'
#end if
#if $SelectDiscriptor.DesType =='All'
--MaxLag '$SelectDiscriptor.MaxLag'
--Weight '$SelectDiscriptor.Weight'
--Lamda '$SelectDiscriptor.Lamda'
#end if
-O '$output1'
| Functional tests |
| name | inputs | outputs | required files |
| Test-1 |
input1: positive.fasta SelectDiscriptor|Lamda: 10 SelectDiscriptor|Weight: 0.5 SelectDiscriptor|MaxLag: 10 SelectDiscriptor|DesType: All |
name: value |
positive.fasta value |
| Test-2 |
input1: positive.fasta SelectDiscriptor|DesType: BinaryDescriptor |
name: value |
positive.fasta value |