| Miscellaneous |
| Version lineage of this tool (guids ordered most recent to oldest) |
| toolshed.g2.bx.psu.edu/repos/iuc/samtools_ampliconclip/samtools_ampliconclip/1.15.1+galaxy2 |
| toolshed.g2.bx.psu.edu/repos/iuc/samtools_ampliconclip/samtools_ampliconclip/1.15.1+galaxy0 (this tool) |
| toolshed.g2.bx.psu.edu/repos/iuc/samtools_ampliconclip/samtools_ampliconclip/1.13 |
| samtools_ampliconclip |
| Requirements (dependencies defined in the <requirements> tag set) |
| name | version | type |
| samtools | 1.15.1 | package |
| Functional tests |
| name | inputs | outputs | required files |
| Test-1 |
input_bed: eboVir3.1.bed input_bam: eboVir3.bam |
name: value |
eboVir3.1.bed eboVir3.bam value |
| Test-2 |
input_bed: eboVir3.1.bed input_bam: eboVir3.bam strand: True |
name: value |
eboVir3.1.bed eboVir3.bam value |
| Test-3 |
input_bed: eboVir3.1.bed input_bam: eboVir3.bam hard_clip_mode: True |
name: value |
eboVir3.1.bed eboVir3.bam value |
| Test-4 |
input_bed: eboVir3.1.bed input_bam: eboVir3.bam strand: True both_ends: True no_excluded: True min_length: 30 tolerance: 6 |
name: value |
eboVir3.1.bed eboVir3.bam value |