Repository revision
19:a1698b43abeb

Repository 'scanpy_filter_genes'
hg clone https://toolshed.g2.bx.psu.edu/repos/ebi-gxa/scanpy_filter_genes

Scanpy FilterGenes tool metadata
Miscellaneous
based on counts and numbers of cells expressed
scanpy_filter_genes
toolshed.g2.bx.psu.edu/repos/ebi-gxa/scanpy_filter_genes/scanpy_filter_genes/1.6.0+galaxy0
1.6.0+galaxy0
None
True
Version lineage of this tool (guids ordered most recent to oldest)
toolshed.g2.bx.psu.edu/repos/ebi-gxa/scanpy_filter_genes/scanpy_filter_genes/1.7.2+galaxy0
toolshed.g2.bx.psu.edu/repos/ebi-gxa/scanpy_filter_genes/scanpy_filter_genes/1.6.0+galaxy0 (this tool)
toolshed.g2.bx.psu.edu/repos/ebi-gxa/scanpy_filter_genes/scanpy_filter_genes/1.4.3+galaxy10
toolshed.g2.bx.psu.edu/repos/ebi-gxa/scanpy_filter_genes/scanpy_filter_genes/1.4.3+galaxy9
toolshed.g2.bx.psu.edu/repos/ebi-gxa/scanpy_filter_genes/scanpy_filter_genes/1.4.3+galaxy8
toolshed.g2.bx.psu.edu/repos/ebi-gxa/scanpy_filter_genes/scanpy_filter_genes/1.4.3+galaxy7
toolshed.g2.bx.psu.edu/repos/ebi-gxa/scanpy_filter_genes/scanpy_filter_genes/1.4.3+galaxy6
toolshed.g2.bx.psu.edu/repos/ebi-gxa/scanpy_filter_genes/scanpy_filter_genes/1.4.3+galaxy5
toolshed.g2.bx.psu.edu/repos/ebi-gxa/scanpy_filter_genes/scanpy_filter_genes/1.4.3+galaxy4
toolshed.g2.bx.psu.edu/repos/ebi-gxa/scanpy_filter_genes/scanpy_filter_genes/1.4.3+galaxy0
toolshed.g2.bx.psu.edu/repos/ebi-gxa/scanpy_filter_genes/scanpy_filter_genes/1.4.3+galaxy3
toolshed.g2.bx.psu.edu/repos/ebi-gxa/scanpy_filter_genes/scanpy_filter_genes/1.4.3+galaxy2
toolshed.g2.bx.psu.edu/repos/ebi-gxa/scanpy_filter_genes/scanpy_filter_genes/1.4.2+galaxy2
toolshed.g2.bx.psu.edu/repos/ebi-gxa/scanpy_filter_genes/scanpy_filter_genes/1.4.2+galaxy1
toolshed.g2.bx.psu.edu/repos/ebi-gxa/scanpy_filter_genes/scanpy_filter_genes/1.3.2+galaxy1
scanpy_filter_genes
Requirements (dependencies defined in the <requirements> tag set)
name version type
scanpy-scripts 0.3.2 package
Functional tests
name inputs outputs required files
Test-1 input_obj_file: filter_cells.h5
input_format: anndata
output_format: anndata
parameters_0|name: n_cells
parameters_0|min: 20
parameters_0|max: 1e9
parameters_1|name: n_counts
parameters_1|min: 0
parameters_1|max: 1e9
name: value
filter_cells.h5
value