Repository revision
6:e94dc7945639

Repository 'create_tool_recommendation_model'
hg clone https://toolshed.g2.bx.psu.edu/repos/bgruening/create_tool_recommendation_model

Create a model to recommend tools tool metadata
Miscellaneous
using deep learning
create_tool_recommendation_model
toolshed.g2.bx.psu.edu/repos/bgruening/create_tool_recommendation_model/create_tool_recommendation_model/0.0.5
0.0.5
echo "@VERSION@"
True
Version lineage of this tool (guids ordered most recent to oldest)
toolshed.g2.bx.psu.edu/repos/bgruening/create_tool_recommendation_model/create_tool_recommendation_model/0.0.5 (this tool)
toolshed.g2.bx.psu.edu/repos/bgruening/create_tool_recommendation_model/create_tool_recommendation_model/0.0.4
toolshed.g2.bx.psu.edu/repos/bgruening/create_tool_recommendation_model/create_tool_recommendation_model/0.0.3
toolshed.g2.bx.psu.edu/repos/bgruening/create_tool_recommendation_model/create_tool_recommendation_model/0.0.2
toolshed.g2.bx.psu.edu/repos/bgruening/create_tool_recommendation_model/create_tool_recommendation_model/0.0.1
create_tool_recommendation_model
Requirements (dependencies defined in the <requirements> tag set)
name version type
python 3.9.12 package
tensorflow 2.9.1 package
keras 2.9.0 package
scikit-learn 1.0.2 package
pandas 1.4.2 package
h5py 3.6.0 package
Functional tests
name inputs outputs required files
Test-1 input_tabular_workflows: test_workflow_connections
input_tabular_tool_usage: test_tool_usage
training_parameters|n_train_iter: 20
training_parameters|tr_batch_size: 4
training_parameters|te_batch_size: 4
training_parameters|tr_logging_step: 10
training_parameters|te_logging_step: 10
training_parameters|te_share: 0.4
name: value
test_workflow_connections
test_tool_usage
value
Test-2 input_tabular_workflows: test_workflow_connections
input_tabular_tool_usage: test_tool_usage
training_parameters|n_train_iter: 20
training_parameters|tr_batch_size: 4
training_parameters|te_batch_size: 4
training_parameters|tr_logging_step: 10
training_parameters|te_logging_step: 10
training_parameters|te_share: 0.4
nn_parameters|n_heads: 2
nn_parameters|n_embed_dim: 32
nn_parameters|n_feed_forward_dim: 32
nn_parameters|dropout: 0.05
nn_parameters|learning_rate: 0.0001
name: value
test_workflow_connections
test_tool_usage
value
Test-3 input_tabular_workflows: test_workflow_connections
input_tabular_tool_usage: test_tool_usage
training_parameters|te_share: 0.0,0.1
test_workflow_connections
test_tool_usage
Test-4 input_tabular_workflows: test_workflow_connections
input_tabular_tool_usage: test_tool_usage
training_parameters|tr_batch_size: ['1', '9']
test_workflow_connections
test_tool_usage
Test-5 input_tabular_workflows: test_workflow_connections
input_tabular_tool_usage: test_tool_usage
training_parameters|te_batch_size: ['1', '1']
test_workflow_connections
test_tool_usage
Test-6 input_tabular_workflows: test_workflow_connections
input_tabular_tool_usage: test_tool_usage
training_parameters|tr_logging_step: ['1', '6']
test_workflow_connections
test_tool_usage
Test-7 input_tabular_workflows: test_workflow_connections
input_tabular_tool_usage: test_tool_usage
nn_parameters|n_embed_dim: ['1', '6']
test_workflow_connections
test_tool_usage
Test-8 input_tabular_workflows: test_workflow_connections
input_tabular_tool_usage: test_tool_usage
nn_parameters|n_feed_forward_dim: 1,6
test_workflow_connections
test_tool_usage
Test-9 input_tabular_workflows: test_workflow_connections
input_tabular_tool_usage: test_tool_usage
nn_parameters|dropout: 0.1,0.2
test_workflow_connections
test_tool_usage
Test-10 input_tabular_workflows: test_workflow_connections
input_tabular_tool_usage: test_tool_usage
nn_parameters|n_heads: 0.1
test_workflow_connections
test_tool_usage
Test-11 input_tabular_workflows: test_workflow_connections
input_tabular_tool_usage: test_tool_usage
nn_parameters|learning_rate: 0.0001,0.04
test_workflow_connections
test_tool_usage