Repository revision
0:f362150bef41

Repository 'ivar_consensus'
hg clone https://toolshed.g2.bx.psu.edu/repos/iuc/ivar_consensus

ivar consensus tool metadata
Miscellaneous
Call consensus from aligned BAM file
ivar_consensus
toolshed.g2.bx.psu.edu/repos/iuc/ivar_consensus/ivar_consensus/1.0.1+galaxy0
1.0.1+galaxy0
ivar version | grep version
True
Version lineage of this tool (guids ordered most recent to oldest)
toolshed.g2.bx.psu.edu/repos/iuc/ivar_consensus/ivar_consensus/1.2+galaxy0
toolshed.g2.bx.psu.edu/repos/iuc/ivar_consensus/ivar_consensus/1.0.1+galaxy0 (this tool)
ivar_consensus
Requirements (dependencies defined in the <requirements> tag set)
name version type
ivar 1.0.1 package
samtools 1.9 package
Functional tests
name inputs outputs required files
Test-1 input_bam: covid19/PC00101P_sub.trimmed.sorted.bam
gap: True
attributes: name
covid19/PC00101P_sub.trimmed.sorted.bam
name