Miscellaneous |
Version lineage of this tool (guids ordered most recent to oldest) |
toolshed.g2.bx.psu.edu/repos/kpbioteam/ewastools/minfi_dmp/1.28.0 (this tool) |
minfi_dmp |
Requirements (dependencies defined in the <requirements> tag set) |
name | version | type |
r-base | 3.5.1 | package |
bioconductor-minfi | 1.28.0 | package |
bioconductor-illuminahumanmethylation450kmanifest | 0.4.0 | package |
bioconductor-rtracklayer | 1.42.1 | package |
Functional tests |
name | inputs | outputs | required files |
Test-1 |
ucsc_genome: ucsc.gtf phenotype_table: phenotypeTable.txt q_cutoff: 1 grset: GRSet_without_SNPs.rdata phenotype: categorical variance_shrinkage: False |
attributes: name |
GRSet_without_SNPs.rdata phenotypeTable.txt ucsc.gtf name |