Repository revision
76:fef50103f6b3

Repository 'ewastools'
hg clone https://toolshed.g2.bx.psu.edu/repos/kpbioteam/ewastools

Minfi DMP tool metadata
Miscellaneous
Minfi DMP
to find differentially methylated positions
minfi_dmp
toolshed.g2.bx.psu.edu/repos/kpbioteam/ewastools/minfi_dmp/1.28.0
1.28.0
None
True
Version lineage of this tool (guids ordered most recent to oldest)
toolshed.g2.bx.psu.edu/repos/kpbioteam/ewastools/minfi_dmp/1.28.0 (this tool)
minfi_dmp
Requirements (dependencies defined in the <requirements> tag set)
name version type
r-base 3.5.1 package
bioconductor-minfi 1.28.0 package
bioconductor-illuminahumanmethylation450kmanifest 0.4.0 package
bioconductor-rtracklayer 1.42.1 package
Functional tests
name inputs outputs required files
Test-1 ucsc_genome: ucsc.gtf
phenotype_table: phenotypeTable.txt
q_cutoff: 1
grset: GRSet_without_SNPs.rdata
phenotype: categorical
variance_shrinkage: False
attributes: name
GRSet_without_SNPs.rdata
phenotypeTable.txt
ucsc.gtf
name