| Miscellaneous |
| Version lineage of this tool (guids ordered most recent to oldest) |
| toolshed.g2.bx.psu.edu/repos/galaxyp/quantp/quantp/1.1.2 (this tool) |
| toolshed.g2.bx.psu.edu/repos/galaxyp/quantp/quantp/1.1.1 |
| toolshed.g2.bx.psu.edu/repos/galaxyp/quantp/quantp/1.1.0 |
| toolshed.g2.bx.psu.edu/repos/galaxyp/quantp/quantp/1.0.0 |
| quantp |
| Requirements (dependencies defined in the <requirements> tag set) |
| name | version | type |
| r-data.table | 1.10.4 | package |
| r-gplots | 3.0.1 | package |
| r-dplyr | 0.7.6 | package |
| r-ggplot2 | 3.0.0 | package |
| r-ggfortify | 0.4.5 | package |
| r-plotly | 4.8.0 | package |
| r-d3heatmap | 0.6.1.1 | package |
| r-munsell | 0.5.0 | package |
| Functional tests |
| name | inputs | outputs | required files |
| Test-1 |
experiment_design_option|exp_design: exp_design_file.tabular experiment_design_option|sample_type: multiple experiment_design_option|volcano_with: pval experiment_design_option|correction_method: BH te_exp: transcript_data.tabular pe_exp: protein_data.tabular cooksd_upper: 4 experiment_design_option|method_type: mean nclust: 4 hm_nclust: 5 |
attributes: name |
protein_data.tabular transcript_data.tabular exp_design_file.tabular name |
| Test-2 |
experiment_design_option|sample_type: logfold experiment_design_option|volcano_with: pval experiment_design_option|correction_method: BH te_exp: mouse_transcript_log_data.txt pe_exp: mouse_protein_log_data.txt cooksd_upper: 4 hm_nclust: 5 nclust: 4 |
attributes: name |
mouse_protein_log_data.txt mouse_transcript_log_data.txt name |