Repository revision

Revision: 4:cb0f5beef55f

Repository 'openms_rnamasscalculator'

Clone this repository: hg clone https://toolshed.g2.bx.psu.edu/repos/galaxyp/openms_rnamasscalculator

RNAMassCalculator tool metadata

Miscellaneous

Name: RNAMassCalculator

Description: Calculates masses, mass-to-charge ratios and sum formulas of RNA sequences

Id: RNAMassCalculator

Guid: toolshed.g2.bx.psu.edu/repos/galaxyp/openms_rnamasscalculator/RNAMassCalculator/2.8+galaxy0

Version: 2.8+galaxy0

Version command string: None

Display in tool panel: True

Version lineage of this tool (guids ordered most recent to oldest)

toolshed.g2.bx.psu.edu/repos/galaxyp/openms_rnamasscalculator/RNAMassCalculator/3.1+galaxy0

toolshed.g2.bx.psu.edu/repos/galaxyp/openms_rnamasscalculator/RNAMassCalculator/2.8+galaxy0 (this tool)

toolshed.g2.bx.psu.edu/repos/galaxyp/openms_rnamasscalculator/RNAMassCalculator/2.6+galaxy0

toolshed.g2.bx.psu.edu/repos/galaxyp/openms_rnamasscalculator/RNAMassCalculator/2.5+galaxy0

RNAMassCalculator

Requirements (dependencies defined in the <requirements> tag set)

Requirements:

name

version

type

openms

2.8

package

openms-thirdparty

2.8

package

omssa

2.1.9

package

blast

2.13.0

package

ctdopts

1.4

package

Functional tests

name

inputs

outputs

required files

Test-1

in_seq: "AUCGGC"
charge: -1 -2
format: list
average_mass: False
fragment_type: full
separator:
adv_opts|force: False
adv_opts|test: true
OPTIONAL_OUTPUTS: ['ctd_out_FLAG', 'out_FLAG']

name: value
name: value

value