Repository revision
2:40a339e4692e

Repository 'vcfcheck'
hg clone https://toolshed.g2.bx.psu.edu/repos/devteam/vcfcheck

VCFcheck: tool metadata
Miscellaneous
VCFcheck:
Verify that the reference allele matches the reference genome
vcfcheck
toolshed.g2.bx.psu.edu/repos/devteam/vcfcheck/vcfcheck/1.0.0_rc1.0
1.0.0_rc1.0
None
True
Version lineage of this tool (guids ordered most recent to oldest)
toolshed.g2.bx.psu.edu/repos/devteam/vcfcheck/vcfcheck/1.0.0_rc1+galaxy0
toolshed.g2.bx.psu.edu/repos/devteam/vcfcheck/vcfcheck/1.0.0_rc1.0 (this tool)
toolshed.g2.bx.psu.edu/repos/devteam/vcfcheck/vcfcheck/0.0.3
vcfcheck
Requirements (dependencies defined in the <requirements> tag set)
name version type
vcflib 1.0.0_rc1 package
Functional tests
name inputs outputs required files
Test-1 reference_source|reference_source_selector: history
reference_source|ref_file: vcflib-test-genome-phix.fa
reference_source|input_vcf: vcflib-phix.vcf
out_file1: vcfcheck-test1.vcf
vcflib-test-genome-phix.fa
vcflib-phix.vcf
vcfcheck-test1.vcf