| Miscellaneous |
| Version lineage of this tool (guids ordered most recent to oldest) |
| toolshed.g2.bx.psu.edu/repos/iuc/iwtomics_plotwithscale/iwtomics_plotwithscale/1.0.0.0 (this tool) |
| iwtomics_plotwithscale |
| Requirements (dependencies defined in the <requirements> tag set) |
| name | version | type |
| bioconductor-iwtomics | 1.0.0 | package |
| Functional tests |
| name | inputs | outputs | required files |
| Test-1 |
plotres|conditionalplottype|probabilitiessection|prob2: 0.75 plotsum|conditionalgroupby|featurealphaplot: 0.05 plotres|average: True plotsum|conditionalgroupby|featureonlysig: True scalesection|thresholdontestscale_1|feature: 2 scalesection|thresholdontestscale_0|scale: 10 testids: output_testandplot/iwtomics.testandplot.tests.txt plotres|conditionalplottype|probabilitiessection|prob0: 0.25 plotsum|conditionalgroupby|groupby: feature plotres|size: True plotres|conditionalplottype|plottype: boxplot rdata: output_testandplot/iwtomics.testandplot.RData plotres|alpha: 0.05 scalesection|thresholdontestscale_0|feature: 1 featureids: output_testandplot/iwtomics.testandplot.selectedfeatures.txt scalesection|thresholdontestscale_1|test: ['1', '2', '3'] scalesection|thresholdontestscale_0|test: 1 plotres|conditionalplottype|probabilitiessection|prob1: 0.5 scalesection|thresholdontestscale_1|scale: 20 |
adjustedpvalue: iwtomics.plotwithscale.adjustedpvalue.txt iwtomicsrespdf: iwtomics.plotwithscale.iwtomicstestresults.pdf iwtomicssumpdf: iwtomics.plotwithscale.summaryplot.pdf |
output_testandplot/iwtomics.testandplot.RData output_testandplot/iwtomics.testandplot.tests.txt output_testandplot/iwtomics.testandplot.selectedfeatures.txt output_plotwithscale/iwtomics.plotwithscale.adjustedpvalue.txt output_plotwithscale/iwtomics.plotwithscale.iwtomicstestresults.pdf output_plotwithscale/iwtomics.plotwithscale.summaryplot.pdf |