Repository revision
1:0e985680e67d

Repository 'droplet_barcode_plot'
hg clone https://toolshed.g2.bx.psu.edu/repos/ebi-gxa/droplet_barcode_plot

Droplet barcode rank plot tool metadata
Miscellaneous
Creates a barcode rank plot for quality control of droplet single-cell RNA-seq data
_dropletBarcodePlot
toolshed.g2.bx.psu.edu/repos/ebi-gxa/droplet_barcode_plot/_dropletBarcodePlot/1.6.1+galaxy1
1.6.1+galaxy1
None
True
Version lineage of this tool (guids ordered most recent to oldest)
toolshed.g2.bx.psu.edu/repos/ebi-gxa/droplet_barcode_plot/_dropletBarcodePlot/1.6.1+galaxy2
toolshed.g2.bx.psu.edu/repos/ebi-gxa/droplet_barcode_plot/_dropletBarcodePlot/1.6.1+galaxy1 (this tool)
toolshed.g2.bx.psu.edu/repos/ebi-gxa/droplet_barcode_plot/_dropletBarcodePlot/1.6.1+galaxy0
_dropletBarcodePlot
Requirements (dependencies defined in the <requirements> tag set)
name version type
bioconductor-dropletutils 1.6.1 package
openblas 0.3.9 package
r-matrix 1.2 package
r-ggplot2 3.2.1 package
r-optparse 1.6.4 package
r-gridextra 2.3 package
bioconductor-delayedarray 0.12.0 package
Functional tests
name inputs outputs required files
Test-1 input|barcode_frequencies: raw_cb_frequency.txt
input|type: False
attributes: name
raw_cb_frequency.txt
name