Repository revision
1:dd3e046a72ad

Repository 'isoplot'
hg clone https://toolshed.g2.bx.psu.edu/repos/workflow4metabolomics/isoplot

Isoplot: Generate plots from isocor output tool metadata
Miscellaneous
isoplot
toolshed.g2.bx.psu.edu/repos/workflow4metabolomics/isoplot/isoplot/1.3.0+galaxy1
1.3.0+galaxy1
None
True
Version lineage of this tool (guids ordered most recent to oldest)
toolshed.g2.bx.psu.edu/repos/workflow4metabolomics/isoplot/isoplot/1.3.0+galaxy1 (this tool)
toolshed.g2.bx.psu.edu/repos/workflow4metabolomics/isoplot/isoplot/1.3.0+galaxy0
isoplot
Requirements (dependencies defined in the <requirements> tag set)
name version type
isoplot 1.3.0 package
Additional information about this tool
isoplot '$datafile' 'galaxy' '$format' --value '$value' --template '$template_file' $SP.barplot $SP.meaned_barplot 
         $SP.static_heatmap $SP.static_clustermap $IP.interactive_barplot $IP.interactive_meanplot $IP.interactive_heatmap
#if $unstack:
    -s
#end if
#if $verbosity:
    -v
#end if
#if $annotation:
    -a
#end if
-g -z '$plots_output' > $data_output 2> '$log_output'
    
None
False
Functional tests
name inputs outputs required files
Test-1 datafile: input_data.csv
template_file: input_template.xlsx
format: pdf
value: isotopologue_fraction
SP|barplot: True
IP|interactive_barplot: True
name: value
name: value
name: value
input_data.csv
input_template.xlsx
value