| Miscellaneous |
| Version lineage of this tool (guids ordered most recent to oldest) |
| toolshed.g2.bx.psu.edu/repos/galaxyp/openms_msgfplusadapter/MSGFPlusAdapter/2.8+galaxy0 |
| toolshed.g2.bx.psu.edu/repos/galaxyp/openms_msgfplusadapter/MSGFPlusAdapter/2.6+galaxy1 (this tool) |
| toolshed.g2.bx.psu.edu/repos/galaxyp/openms_msgfplusadapter/MSGFPlusAdapter/2.6+galaxy0 |
| toolshed.g2.bx.psu.edu/repos/galaxyp/openms_msgfplusadapter/MSGFPlusAdapter/2.5+galaxy0 |
| toolshed.g2.bx.psu.edu/repos/galaxyp/openms_msgfplusadapter/MSGFPlusAdapter/2.2.0 |
| toolshed.g2.bx.psu.edu/repos/galaxyp/openms_msgfplusadapter/MSGFPlusAdapter/2.1.0 |
| MSGFPlusAdapter |
| Requirements (dependencies defined in the <requirements> tag set) |
| name | version | type |
| openms | 2.6 | package |
| openms-thirdparty | 2.6 | package |
| blast | 2.9.0 | package |
| ctdopts | 1.4 | package |
| Functional tests |
| name | inputs | outputs | required files |
| Test-1 |
in: spectra.mzML database: proteins.fasta precursor_mass_tolerance: 10.0 precursor_error_units: ppm isotope_error_range: 0,1 fragment_method: from_spectrum instrument: high_res enzyme: Trypsin/P protocol: none tryptic: fully min_precursor_charge: 1 max_precursor_charge: 3 min_peptide_length: 6 max_peptide_length: 40 matches_per_spec: 1 add_features: False max_mods: 2 max_missed_cleavages: -1 tasks: 0 fixed_modifications: variable_modifications: Oxidation (M) adv_opts_cond|add_decoys: False adv_opts_cond|legacy_conversion: False adv_opts_cond|force: False adv_opts_cond|test: true adv_opts_cond|adv_opts_selector: advanced OPTIONAL_OUTPUTS: ['ctd_out_FLAG', 'out_FLAG', 'mzid_out_FLAG'] |
name: value name: value name: value |
spectra.mzML proteins.fasta value |