| Miscellaneous |
| Version lineage of this tool (guids ordered most recent to oldest) |
| toolshed.g2.bx.psu.edu/repos/galaxyp/proteomiqon_joinquantpepionswithproteins/proteomiqon_joinquantpepionswithproteins/0.0.1 (this tool) |
| proteomiqon_joinquantpepionswithproteins |
| Requirements (dependencies defined in the <requirements> tag set) |
| name | version | type |
| proteomiqon-joinquantpepionswithproteins | 0.0.1 | package |
| Additional information about this tool |
#import re
#set quant_basename = $re.sub(r'[^\w ,.\-+]','_',$quantifiedpeptides.element_identifier)
ln -s '$quantifiedpeptides' '${quant_basename}.quant' &&
#set prot_basename = $re.sub(r'[^\w ,.\-+]','_',$inferredproteins.element_identifier)
ln -s '$inferredproteins' '${prot_basename}.prot' &&
ln -s '$out_quantAndProt' '${quant_basename}.quantAndProt' &&
proteomiqon-joinquantpepionswithproteins -i '${quant_basename}.quant' -ii '${prot_basename}.prot' -o './'
| Functional tests |
| name | inputs | outputs | required files |
| Test-1 |
quantifiedpeptides: sample.quant inferredproteins: sample.prot |
name: value |
sample.quant sample.prot value |