| Previous changeset 7:e77ab15bbce9 (2013-03-20) Next changeset 9:c0a6e8f595ec (2013-04-11) |
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Commit message:
Add REAMDE |
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added:
README |
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| diff -r e77ab15bbce9 -r 07cd87e94fbe README --- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/README Thu Mar 28 14:55:50 2013 -0500 |
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| @@ -0,0 +1,5 @@ +Cconverts the tabular pileup output from samtools mpileup to a VCF file. +Filters on read coverage, base quality and the frequency of a variant. +The VCF info is populated with a SAF tag that give the specific frequency (0 - 1) of a variant being observed. +This is used for filtering in the mmuff ( Missense Mutation and Frameshift Finder) workflow. + |