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Description: Add option to set VCF ID field value, this can be used to ID germline variants for SnpSift

Commit: 9:c0a6e8f595ec

Parent: 8:07cd87e94fbe

Commited by: b'Jim'

Pushed: 2013-04-11

Repository metadata is associated with this change set.

Description: Add REAMDE

Commit: 8:07cd87e94fbe

Parent: 7:e77ab15bbce9

Commited by: b'Jim'

Pushed: 2013-03-28

Description: Fix VCF header

Commit: 7:e77ab15bbce9

Parent: 6:d90f56ecd2f9

Commited by: b'Jim'

Pushed: 2013-03-20

Description: Change version to: pileup_to_vcf.pyV1.1

Commit: 6:d90f56ecd2f9

Parent: 5:8688e29ba96f

Commited by: b'Jim'

Pushed: 2013-03-20

Description: Fix test 2

Commit: 5:8688e29ba96f

Parent: 4:fafa105e5f58

Commited by: b'Jim'

Pushed: 2013-03-19

Description: Fix base quality

Commit: 4:fafa105e5f58

Parent: 3:aa76c8dd97e6

Commited by: b'Jim'

Pushed: 2013-03-19

Repository metadata is associated with this change set.

Description: Reference skips have a base quality score

Commit: 3:aa76c8dd97e6

Parent: 2:d6de2d1f4af9

Commited by: b'Jim'

Pushed: 2013-03-19

Description: Fix read depth reporting

Commit: 2:d6de2d1f4af9

Parent: 1:bb0ac51f1b02

Commited by: b'Jim'

Pushed: 2013-03-03

Description: Handle delection char: *

Commit: 1:bb0ac51f1b02

Parent: 0:3890f8ba0e4d

Commited by: b'Jim'

Pushed: 2013-02-18

Description: Uploaded

Commit: 0:3890f8ba0e4d

Parent: None

Commited by: b'jjohnson'

Pushed: 2013-02-18