| Miscellaneous |
| Version lineage of this tool (guids ordered most recent to oldest) |
| toolshed.g2.bx.psu.edu/repos/jjohnson/pileup_to_vcf/pileup_to_vcf/2.2 (this tool) |
| toolshed.g2.bx.psu.edu/repos/jjohnson/pileup_to_vcf/pileup_to_vcf/2.1 |
| toolshed.g2.bx.psu.edu/repos/jjohnson/pileup_to_vcf/pileup_to_vcf/2.0 |
| pileup_to_vcf |
| Requirements (dependencies defined in the <requirements> tag set) |
| Functional tests |
| name | inputs | outputs | required files |
| Test-1 |
input_file: test.pileup select_order: no min_base_qual: 0 min_cvrg: 0 min_var_pct: .1 allow_multiples: True snps_only: False depth_as: ref |
output_file: None |
test.pileup |
| Test-2 |
input_file: test.pileup select_order: no min_base_qual: 5 min_cvrg: 5 min_var_pct: .1 allow_multiples: True snps_only: False depth_as: ref |
output_file: None |
test.pileup |