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view test-data/phylogeny_concat.fasta @ 0:acc3674e515b draft default tip
planemo upload for repository htpps://github.com/abims-sbr/adaptearch commit 3c7982d775b6f3b472f6514d791edcb43cd258a1-dirty
author | abims-sbr |
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date | Fri, 01 Feb 2019 10:28:50 -0500 |
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>Ac gtacatgggcaagtttttcttcgaatgataaggtgcatatggatcattggcataatacttgggtatcttaaagtatctgttgaccattctgtccagcatccagcactggcgctgtgtgcagaagacatggtgctgcaggtgtgccactctggcacccttcttcttccacagcttctcgtgtcggccgtgcatttcagagcttcctcagcgtactccagaagagtaacaaagctctctttggagccctcgggcagaattccattggggatctccacaatgagcttccgaccaagaagcagcgtttcccagctgacctccaagcaatctgtcagagtgatacggaagcacaaactcgaggcagtctgtgccttcgccaatgtgtttacattttccggcaggccattggcgctgacagggggctcttttaacacccccacaccgttgccctctgtcttttcagacacgttgacggcgtggggctcatcaggagcaccaccgaggcccaggacccaatcgtatacaataccgcgagggcaaaccaaagccataaccgtgcattgttcctgctgctcggttttcaatgacaactccaaacaaaccacgattcacacgcgagtcttccttttctttgccacttgttgtgaacccatattcaaatacttggtttatttgattatgaggaatgccaccaccacggtcagatattcttataatgaaatcaattttgttgttggcaatagtaacagacacaggtggcatattctccagggaattcagatgattttctactgtagctctcattgcattcttcagcatctcatgtataatgtactcaagtggtggtgcaatgtatggaaaggttgcatttacatgaccattgatacgaacatctggccagatcttgttgtatacatgtccttgtcttcaggatttgacatgccatggtcttctttgggtttcactgtctctgtgcttcctggtttgtctacaagtttgactacatccttatcagatgatggagctttgttctctgactgctttgaagaacttggatcagtcttggaaatattttcacctggaagtcttgctggtctccagaactccttggcttgttccttcgtcagaatccaggcttgtttagatatatccagagcctggtctgggatgggtgacgataataagaacaatgaacatattaacctcaaggttacaggacaggatggcagtgttgtacactttaaaatcaagaagaacactcccctgaggaagctgatgaatgcatactgtgacagaacaggtgtcaagagtggagcaatgcgattccgatttgatgggcaaccaatcaatgaaacagacactccaacacagctggacatggaagatggtgatgtgattgatgtattccaacagcagactggaggcgtcgagttgacccacgtaatgcttcacgtctggacacaagggatcccagacaggctgaaccacgacgtgctgcatcgcaaccagcagcacctaccccagcacaaagattacaggctccaccatcatctggaggaagcaatgggccaatttcatctcaggatcaggaaaagactgctctcatcatgcaggtgttacaacgtgctggtgctggtgccgaactatcaggtgatgaatgtggtgatcacgtcgttcgtgttcgtctgcgccgcccacgagatccactcgctgaccgtcaagctgacggactacgccgtgccaaacgactggagaatactgctgaggaacatggtctgctttactgccgttctgatacctgtggccataacacacggtgcatttggcgtatgtctgggaattgagtattctgtggcaatgacctacagaatggtgtcatgtcaaaagcatccacttctgcatcctttaaatgaggatctttatttattgcaggatttggtggataagggtgtgagatgccacttggtaccgaggtgtccttgctcgtggcaccaactgctgtatatgaaggtggtacagtcaaaagaaatgcaacgaataaaccggagctaccagaaaaaccaaaagtttcaagaatggagcaagtttatgaaaacataccgatgtccgaacaaaaacaaggtctgcagagagacgaaagtaatggaaaacgtcaccttccattccagcttcgtggagttgatggcacaacttacgctgacctcgagatcattctggtggcttgggctggcactgatagcagatggtgctcttggtggcggtgctatgcgtgtgcctcctgggggaggtggcagtattcccgtgccatgtccacggctacgctgcttgctggcattgcttgggctaccatgctccctgtttttctttgtagctatatttatcctaatggtttggccctctttgaagccaagatccagcttaggtccagagctaagtaggtctttgttgtccttctgttcttcaagtcttcagtacaacctggtgatcatgttatcccattgtacatccctcagtgtggtgaatgcaaattctgcaaaagtccgaagaccaacctctgctcgaaaatcagagctactcaaggtgcaggtaagatgcctgatggcacaagcaggttctcttgtaatggcaaggagctgtatcacttcatgggctgcagcacattcagtgaatataccgtggttgctgaaatatctgtgtgtaaggttaatccagaagctccactgggcaaggtttgcttacttggctgtggaatatcaactggttatggagctgccttccggaactgtagctgttttcggcttcctgtcgtcgtctggtgcggaagaacgcgcgcctgtccacctggctgtgtgtgcatgttgctgtttatgcatgttcatgtcagtgcttgtgatcggtgagttagaacgagcgagtgagcgggtgcgtgagacatccgacaacatcctgtctggtcgttcactgtgtactgcttttgaatcatttcctaaaggtgaaggtcgtctcgtggctgcttgccctcgttgtgtggagtgcgtgattgaccctgtaatgttgggagccaaacataatgtactgtggcgccacctggtggagaagaatgttgagcgccaagatgatgtacatgaggtgaaaggaagccatcagcaaggcttgaggcctcatcttatgtggccggatcttgaacaactgaatccaaagaaaccgaatgccaattgcttccattccaccaatggcacagctgagcaggaacaagattccactgtgatgtgtaccttctgtccctgtatgtcaatggattttaccaggtcgccatctgtcagtgtctgtttacgttctctggaatatttgggcatgagagtatctttgagagttctatgttcagttccttgttgtctgtcatcaatggcagcaattgtccatggcaatcctaagccaaggaagacattgacagagttggacccagttacatttccaattgagttgtcagcatatttctcctgtgtggcagcctgcttgctggcaaacagatctggcaaacttgttcccagagctacaaatgtgatggcagtgacgctgtccttcaggccaaccaaacaaccgaagatagatgccaagtccccaacaacggcagtaagtagaccaatcatgataagggcaatgaagaaggctaaccagccaccccagatggaaggaggaggcacaagtgcaaaaatgatcttccagccaaaggttaagaagtgcatgatgtctgtcttcactcgactgagatccgtccccaacgctgacgtcacaaatgtccggcccccgcgctgcgggaagaccttcaccattcacttcatgcgaatcctcgaccgccgctcgttcccctccataggcctccactgcctgctgaatgaccgactggacgaaatctctgacctgcacgtggaagcccatttccaactcagacgacatatacatggacagatatctcgctacttcctggatgacgtcatcaacgttagtcttgacttccctgatccacaaggttctatgagataccttgaagccaatacaacagccctgactccacctaacagagggccgttttggtactccacagatgttgatacgaggacacaggcaccctttggtaggtcagtcctccagtgtcgcagttcacaaatatctctagttggatgtggggccatgttgttgagcacatacttcatggtggatcttgttatatatgagcgtcttgtcataatcggcagtgtagttctttactgtgccataaactgcatctatactgaggatgttgaccacttctatacgatcaaagtaaataatgacacctccactggtaccacatggtacattcttgacctcatctgtttgacaatgtcactgccagaccagccacataacacagggctctccagggctgcagggacagctgatagcacaacgtgtgcagtatccgcgaaaaggcgaagatccggaaatgccaaagggccacctcagtcgacggcgacgtcagtacgtaaaggaaaccaatcagcacgaaagggggaatgttctccatgtcatgtcatcagatcggcaatgttcttttccaggtcatcaattctgtgtcccatgtcatctattcttgtgataacttggtcggacatgttctggaatttatcctgcatctgctgtaaaaggttttgcacatattgtgttagatcctgtatgtctttaggatcggcactgttggtgataaaaaagaagcctaatatttttccacccaaatgttttcgtcttgcctcttcatggtccataatcccacctgatgttgtgagcacaatgtacccaaactgtcttgatggcagtaggttagttgtccatttctccatgtctctgatgcaaacatcaaaccttggacttatcacaccacacttgttcagtcttcctgtcaaattaacaacaatttttcctgctctgtggtcatcaatgatctcaaactcaccaatgaaaagtgtgcggtatatgttccttcctaattttgtcctaaactggatgtatgcctctggatcatccttttctggatcttttgttgtatctgtgagaactgcttccatttcagcctctttttcttcctccttgctcataatttctgctctaaccttatcaagcaaggcatactgtgacatctgctgtatgatgacaggagctggtggtggactgtgcagactggccatgccagccagactcgtcatgcttgctgaaccattcatcatttgctgctgttgctgctgtgttagctgctgtggtttaactttgcacacattgctatggtccagttcattcttgttactggtgtttagatctgatgaggacatcacagacgtggcactctgtgcagaggtaatattttctgtgaggttcttcatgagttcggtaagtttgctagtcagatcttcatctggctgctttgccgacgttgttggtatcgttggtcgttcatgtgatgtagtcggcagatgttctgatttcgtgttctgcgctgtcgttggacttggtaaggactgggtcggtggcgccgcggtgccgtcgcggccaagactgcagtcatcagagtccgatgttagtgtgaacgtggctgggcaggaaacacgcagaccaattgacctcagtgagccatccagcggagaactgacacctggacaaggatccgaggctcggggatctacaacacgaggggctgaagctaagggatccacacccagagattctgaggtcataacatggatggggtcgacattgccaagcttcttggtgtgtgttttcagtggcagtggtggtggtggtgttgatttcactggtgactgtgcaggactcgagtctcctattgatgtgtcctcctcaataatgccctcatccgtgtgttcagcatctgcaggaagtggattggcagttatgcgtatgctgcactcggatcctttaaaccacagtgattcccattccagggaggcagatgccgtttccatggattcagacacatttagtgttgatggtagcagacgtttgaagtcaatcgtttgcttgcctcatgacagacaacagaacatctctgatgatgaattgaactccaaacatacgaagaaatcacataaattgaagaaagtgaaaagacatcaaaagagaaaaaagaaatcttccattttgggcgaatcaggatcttgcacaagtggtgattcagtggactctggagaggcggtcgcttccggcatctcttcagtgttgtcaggatctgtgatgtcttgtacaagaggttcattagatatatcctctattattgtatccgagggatccgtaacatgggcgaagtgccatctaatgccatcgttactgcctcttttaaatcggaacaagaaagagaaatctactggacgctcatcaactatgctcagcagttctttgcctctgataacaatgaagattttgccatgttttcttcaccaatgcttgaatacaaagactcagcctctttgtcatcagctggtttgtcttccacagtttcagtttccattggttcctcctcatcctctttggatgcctcctcagcagcagcctctgtacgtatcttttcctctgcctccttggcagcccttcttccacttcttcttctgggactttcatcttcctcctgttccttggcactggaccttccctttctggttgctttgcgaggcgatggtgttttcaactttttcacttcctcttcctctggctggtactcctcttcctcttcctcctcttcaccctgtgattttcgtccttgacctctcctgccacgtgaactccggccagcacctcgaccagtgcctctgccacgtggctttgactgtgagcacccatcttatcatttgcatgacatacggcacaactcttttcgtaatcctcctgacctggagctaccgtatccttcttcttagggaggtctcgaacttcgctaaatggtggattgacatcggttcgtgggtctttcaccacaaccaacttagccccatcatcttcacaatctttcatacatcgcttcccaattgctccaatattcttgccatccagtgtatgtgtgtgaaagcatgtgtagaactggtactgccagccaaatcacagcatcgtttagaagatgcccacgccgtctacgtggtgggagtccacacacacacacacgtactaaggactaagttcatagagatgctatactcaacaagaaaaagtcactatcatacagtgattacccatcacttagtgcagacaaacacatcaccattacattttccatcaacaacagtccatggatttacagattttgtcttagttgcgactttcctactgtttttagtaattctgcccgactgcatgctgcccactggttttaggtttaccttggctgttgatttgtacgattgcttacgtggcgctggaagtgttttggcgtcactggctggcaggttgttttcatctcttgttgtaagcggagcacgcaatttcttgctggagttatgcctcggtaccggcacgtcagccagcctatcagggacggatgttttgctgacgtcaccaaggcttgccgatgagcggcgttttgattcgctgctgcgtcgattccttccggaactgccgacagacgaatcggccaatgacgtcaacgaactgggacggctgctcgtacttccggcgcgcgactgcggcctctggttgctgaataatgaactacttccattcatgtgggcatcaagcttaggccctttctgtgacagtctctccagcgtgtcgtcgctgacagtctcgtttgcctctttttctaactccaaccgaaatatatatctcgtgctgcccttcttaatatcagtaacgtttacgctgtattggccttccagtgagctgtccttgagtacatcctctgttagtttagtaaatgttgccgcttcctttatgtacttacacactctagctatatcttcacatgatgcaccatattccattgctaaggcagcctcattaataagttctccagcaaccgaagcaacaatatgtacaccaagaactctgtccgactctttatctccaataacttttaccaagccatctgtatcattgttagtttttgcccgactgtttgctgccaaaggaaactttcca--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- >Pu cctgcggcaacatcgcctgttcacgtcgaacccgaagctggactgctgcccgacgataaccgagctgacccagcgggcggcgggcatcaacccgcagggcctgctcctcgagctcttccacacgcccaacttcacacagacgttctacgagacggcctgccacccggcgatcaagggccggccgtgccagttcatcgaccgccagtacgcggcgtacagcaagtgcatacagcagtactcgtacgtgtacgcgctcgggcggacgtacgg------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ >Am aagaagtccgtgacccaggaggtcgtgacccgagaatacaccatcaacatccacaagcgtatacatggcattggcttcaagaggagggcgcctcgcgcggtgaaagccatccgagagtttgccttcaagcagatgggcacagaggatgtccgaatcgagacccgactcaacaagcacgtctggtccaag------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ >Ap tctgatccatccataatggctgcatccatctggacttctcctttggcatttagggctgatccagtacctgcatcaaacacagagttgttctccatatccatgacagccaattccacaacatctagagcagatccaccatttaataagagctttaaccctttaagtgcagcctttttaaccccttgtctgttttgcatggccatgctgtctgggatggcccaagctccacca--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- >Pf tgtagcattaccatgtattggcattccactctccgtcatgttgacaaccaccgttccggcgagtccaaaatcatcttcaaagatataatctggtattgttatgttaatgtcatagagagtcggaaagtgattttcagttttatactgatgcgtgtatattttgccgtatccatgcacctctattgtccaccatccgtgtttacaaggatgatgttgttgtatcgttccctcgagataaccatttctaacttgttgttcgcgccatctcttcacgtactggccggcgccatctcgaaggtatatgtccacagcgccatgtgg------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ >Pg gaagccatggcacgccgggagaagggcaagaagaagtctgttaccaatgaggtggtaactagagaatacacagtgaatatccacaaaagaattcatggaataggtttcaagaagagggcacctcgtgcgatcaaggctatcaggcagtttgcctttaaacagatgggcactgaggatgtgcgtatagagacgagactcaacaaacacatttggtcaaagggaattagaaatgtcccattccgtgtgcgtgtaagattggctcgtaaaaggaatgaagatgaagactcgccacacaaactttacaccttggtctcctatgtacctgttacaacattcaaaggtacacagacagtaaatgtggagagtagtgac--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- >Ph cgccgtgagaagggaaagaagaagtccgttaccaatgaagtggtaacaagggaatacaccataaacatccataaacgaattcacggaattgggttcaagaagagggcgccacgtgccatcaaagccatcagacagtttgcc------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ >Ps acatggagtagcattggtcgaccacgagtcaatggcaagcttgagatgacaaggagtatcggtgatgttgcggtgtcggcatgcggtggctccctcatggtggcaacaaggagaactacagctctgctcgaaactgatgatatattcaaacacaaagatgtgatatgtttaggtgtaatattttgtatgatattcttggtgaccttgcttcttgtggcagcgaccttcacctcacgaccattgagcgcagactttctgtcatcttcaaggaagacaaaatgtgtcatggcatggatactcgcgtatcccattgtaatcatctttttcgtttatatacgttactaccaagacgaggattgcatagatctgacaccttatattatacctcaggttgacaagacttattgtggtgctaatcttgatgacttctataaaaagtccatgttgacatttgaagcttatgtcattgccctggttggtgctgtactagtagtcttaagtatgttccatctgatgcacactgcagccaattacattcagatccacgaatctgggccgacgaattacgatatttataagaacgaagtggccaataaacatccatcgggatca------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ >Pp acacagaaggaagcacagagggcctaccaagaagaactaaagagacagattgaggagcagaagctgataaaacaaagggaaaaggaagagagagaaagatacgataagaagctagatgacgaaattaggaactatgacccctttggacgaggtggtggaggagcaccaatggatggtgaatcgtttgctagaggtggtcatggtatctttggtgaaccattgtctgatgct--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- >Pa gagctgtcctttgtgctgtcatctttaacatttatagccacatttctgtttgcatcacttgccatgaagaattaccatggcaacaagtatccaccaatttggtttcctagtgatggtggcttcacctatcatgtgataagtacagcgtctgagtggataatgggatgtagaaaatggtacgactatgcctgtaagccaatggattattacacagaaacaaaaatcttgcaagaaaagattgtcctagaagccaatagtgatgacttttttacagtagctatccgtccacatggaatctttggcccacgtgacccgcacatggtgcccactactgtacgcactgccaaggcaggaaaaatgaagttcaaaataggcgatgggaaaaatattgtggatttcacttttgtggaaaatgttgttcatggtcacatt------------------------------------------------------------------