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view Tools/Second/remove_motifs_v2.xml @ 3:b30ba2b06326 draft
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author | amadeo |
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date | Mon, 05 Sep 2016 06:01:48 -0400 |
parents | 229d36377838 |
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<tool id="remove_same_dif_motifs" name="Remove motifs overlaped" version="1.0.0"> <description>Script to compare contigous motifs in gff file and, in case that two overlap, remove the motif with the highest p value</description> <command interpreter="perl">remove_motifs_galaxy.pl $input $output $secondoutput $value </command> <inputs> <param format="gff" name="input" type="data" label="FIMO file"/> <param name="value" size="3" type="integer" value="20" label="Overlap value"/> </inputs> <outputs> <data format="gff" name="output" label="positive_strand" /> <data format="gff" name="secondoutput" label="negative_strand" /> </outputs> </tool>