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comparison trinity.xml @ 8:f6fff1488aa8 draft

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author anmoljh
date Thu, 27 Aug 2015 10:54:56 -0400
parents 814d53f9b9bb
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7:814d53f9b9bb 8:f6fff1488aa8
5 5
6 <description>De novo assembly of RNA-Seq data Using Trinity</description> 6 <description>De novo assembly of RNA-Seq data Using Trinity</description>
7 <requirements> 7 <requirements>
8 <requirement type="package" version="r20140717">trinityrnaseq</requirement> 8 <requirement type="package" version="r20140717">trinityrnaseq</requirement>
9 <requirement type="package" version="0.12.7">bowtie</requirement> 9 <requirement type="package" version="0.12.7">bowtie</requirement>
10 <requirement type="package" version="1.2">samtools</requirement>
10 </requirements> 11 </requirements>
11 <command> 12 <command>
12 Trinity --JM $JM --CPU $CPU 13 Trinity --JM $JM --CPU $CPU
13 14
14 ## Inputs. 15 ## Inputs.