Mercurial > repos > artbio > repenrich2

comparison test-data/chrY_paired_fraction_counts.tab @ 9:2b61c6407efb draft default tip

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planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/main/tools/repenrich2 commit 961a14cd73dd8e40b2f30d5e4df136b98cd8f07a
author artbio
date Thu, 25 Apr 2024 16:22:34 +0000
parents 567549a49eb2
children
comparison
equal deleted inserted replaced
8:567549a49eb2 9:2b61c6407efb
6 BATUMI_LTR LTR Pao 0.0 6 BATUMI_LTR LTR Pao 0.0
7 BS LINE Jockey 0.0 7 BS LINE Jockey 0.0
8 BS2 LINE Jockey 58.0 8 BS2 LINE Jockey 58.0
9 BURDOCK_I-int LTR Gypsy 0.0 9 BURDOCK_I-int LTR Gypsy 0.0
10 Baggins1 LINE LOA 0.0 10 Baggins1 LINE LOA 0.0
11 Bica_I-int LTR Gypsy 49.0 11 Bica_I-int LTR Gypsy 50.0
12 Bica_LTR LTR Gypsy 1.0 12 Bica_LTR LTR Gypsy 0.0
13 CIRCE LTR Gypsy 0.0 13 CIRCE LTR Gypsy 0.0
14 Chouto_I-int LTR Gypsy 1.5 14 Chouto_I-int LTR Gypsy 1.5
15 Copia1-I_DM LTR Copia 0.0 15 Copia1-I_DM LTR Copia 0.0
16 Copia_I-int LTR Copia 25220.0 16 Copia_I-int LTR Copia 25220.0
17 Copia_LTR LTR Copia 652.0 17 Copia_LTR LTR Copia 652.0
35 FW2_DM LINE Jockey 0.0 35 FW2_DM LINE Jockey 0.0
36 G3_DM LINE Jockey 0.0 36 G3_DM LINE Jockey 0.0
37 G5A_DM LINE Jockey 0.0 37 G5A_DM LINE Jockey 0.0
38 G5_DM LINE Jockey 0.0 38 G5_DM LINE Jockey 0.0
39 G6_DM LINE Jockey 0.0 39 G6_DM LINE Jockey 0.0
40 GA-rich Low_complexity Low_complexity 0.67 40 GA-rich Low_complexity Low_complexity 0.0
41 GTWIN_I-int LTR Gypsy 12.5 41 GTWIN_I-int LTR Gypsy 12.5
42 G_DM LINE Jockey 0.0 42 G_DM LINE Jockey 0.0
43 Gypsy11_I-int LTR Gypsy 0.0 43 Gypsy11_I-int LTR Gypsy 0.0
44 Gypsy11_LTR LTR Gypsy 0.0 44 Gypsy11_LTR LTR Gypsy 0.0
45 Gypsy12_LTR LTR Gypsy 0.0 45 Gypsy12_LTR LTR Gypsy 0.0
46 Gypsy2-I_DM LTR Gypsy 4.0 46 Gypsy2-I_DM LTR Gypsy 4.0
47 Gypsy2-LTR_DM LTR Gypsy 0.0 47 Gypsy2-LTR_DM LTR Gypsy 0.0
48 Gypsy3_LTR LTR Gypsy 0.0 48 Gypsy3_LTR LTR Gypsy 0.0
49 Gypsy4_I-int LTR Gypsy 0.0 49 Gypsy4_I-int LTR Gypsy 0.0
50 Gypsy5_I-int LTR Gypsy 0.0 50 Gypsy5_I-int LTR Gypsy 0.0
51 Gypsy6A_LTR LTR Gypsy 1.0 51 Gypsy6A_LTR LTR Gypsy 0.0
52 Gypsy6_I-int LTR Gypsy 31.0 52 Gypsy6_I-int LTR Gypsy 31.0
53 Gypsy8_I-int LTR Gypsy 0.0 53 Gypsy8_I-int LTR Gypsy 0.0
54 Gypsy8_LTR LTR Gypsy 0.0 54 Gypsy8_LTR LTR Gypsy 0.0
55 Gypsy9_I-int LTR Gypsy 0.0 55 Gypsy9_I-int LTR Gypsy 0.0
56 Gypsy_I-int LTR Gypsy 32.0 56 Gypsy_I-int LTR Gypsy 32.0
71 Invader6_LTR LTR Gypsy 0.0 71 Invader6_LTR LTR Gypsy 0.0
72 MAX_I-int LTR Pao 56.0 72 MAX_I-int LTR Pao 56.0
73 MAX_LTR LTR Pao 2.0 73 MAX_LTR LTR Pao 2.0
74 MDG1_I-int LTR Gypsy 0.0 74 MDG1_I-int LTR Gypsy 0.0
75 MDG1_LTR LTR Gypsy 0.0 75 MDG1_LTR LTR Gypsy 0.0
76 MDG3_I-int LTR Gypsy 156.5 76 MDG3_I-int LTR Gypsy 156.0
77 MDG3_LTR LTR Gypsy 2.5 77 MDG3_LTR LTR Gypsy 3.0
78 MICROPIA_I-int LTR Gypsy 51.0 78 MICROPIA_I-int LTR Gypsy 51.0
79 MICROPIA_LTR LTR Gypsy 2.0 79 MICROPIA_LTR LTR Gypsy 2.0
80 Mariner2_DM DNA TcMar-Tc1 0.0 80 Mariner2_DM DNA TcMar-Tc1 0.0
81 NINJA_I-int LTR Pao 0.0 81 NINJA_I-int LTR Pao 0.0
82 NOMAD_I-int LTR Gypsy 0.0 82 NOMAD_I-int LTR Gypsy 0.0
83 PROTOP_A DNA P 50.0 83 PROTOP_A DNA P 55.0
84 PROTOP_B DNA P 10.0 84 PROTOP_B DNA P 5.0
85 QUASIMODO2-I_DM LTR Gypsy 43.0 85 QUASIMODO2-I_DM LTR Gypsy 43.0
86 QUASIMODO2-LTR_DM LTR Gypsy 0.0 86 QUASIMODO2-LTR_DM LTR Gypsy 0.0
87 QUASIMODO_I-int LTR Gypsy 108.0 87 QUASIMODO_I-int LTR Gypsy 105.0
88 QUASIMODO_LTR LTR Gypsy 23.0 88 QUASIMODO_LTR LTR Gypsy 25.0
89 R1_DM LINE R1 0.0 89 R1_DM LINE R1 0.0
90 ROOA_I-int LTR Pao 0.0 90 ROOA_I-int LTR Pao 0.0
91 ROOA_LTR LTR Pao 0.0 91 ROOA_LTR LTR Pao 0.0
92 ROVER-I_DM LTR Gypsy 414.0 92 ROVER-I_DM LTR Gypsy 414.0
93 ROVER-LTR_DM LTR Gypsy 6.0 93 ROVER-LTR_DM LTR Gypsy 5.0
94 S2_DM DNA TcMar-Tc1 0.0 94 S2_DM DNA TcMar-Tc1 0.0
95 STALKER4_I-int LTR Gypsy 143.5 95 STALKER4_I-int LTR Gypsy 146.5
96 STALKER4_LTR LTR Gypsy 25.0 96 STALKER4_LTR LTR Gypsy 25.0
97 S_DM DNA TcMar-Tc1 53.0 97 S_DM DNA TcMar-Tc1 53.0
98 Stalker2_I-int LTR Gypsy 103.0 98 Stalker2_I-int LTR Gypsy 99.0
99 Stalker2_LTR LTR Gypsy 3.0 99 Stalker2_LTR LTR Gypsy 3.0
100 TART-A LINE Jockey 4.0 100 TART-A LINE Jockey 4.0
101 TART_B1 LINE Jockey 21.0 101 TART_B1 LINE Jockey 21.0
102 TC1-2_DM DNA TcMar-Tc1 0.0 102 TC1-2_DM DNA TcMar-Tc1 0.0
103 TC1_DM DNA TcMar-Tc1 0.0 103 TC1_DM DNA TcMar-Tc1 0.0
107 ZAM_I-int LTR Gypsy 0.0 107 ZAM_I-int LTR Gypsy 0.0
108 _AACACA_n Simple_repeat Simple_repeat 0.0 108 _AACACA_n Simple_repeat Simple_repeat 0.0
109 _AAT_n Simple_repeat Simple_repeat 0.0 109 _AAT_n Simple_repeat Simple_repeat 0.0
110 _ACAATAG_n Simple_repeat Simple_repeat 0.0 110 _ACAATAG_n Simple_repeat Simple_repeat 0.0
111 _ACC_n Simple_repeat Simple_repeat 0.0 111 _ACC_n Simple_repeat Simple_repeat 0.0
112 _AGAGAAG_n Simple_repeat Simple_repeat 2.17 112 _AGAGAAG_n Simple_repeat Simple_repeat 2.5
113 _AGAGA_n Simple_repeat Simple_repeat 43.0 113 _AGAGA_n Simple_repeat Simple_repeat 43.0
114 _ATAAT_n Simple_repeat Simple_repeat 0.0 114 _ATAAT_n Simple_repeat Simple_repeat 0.0
115 _ATATATT_n Simple_repeat Simple_repeat 0.0 115 _ATATATT_n Simple_repeat Simple_repeat 0.0
116 _ATATTAT_n Simple_repeat Simple_repeat 0.0 116 _ATATTAT_n Simple_repeat Simple_repeat 0.0
117 _ATTTTT_n Simple_repeat Simple_repeat 0.0 117 _ATTTTT_n Simple_repeat Simple_repeat 0.0
118 _ATT_n Simple_repeat Simple_repeat 0.0 118 _ATT_n Simple_repeat Simple_repeat 0.0
119 _AT_n Simple_repeat Simple_repeat 0.0 119 _AT_n Simple_repeat Simple_repeat 0.0
120 _A_n Simple_repeat Simple_repeat 0.0 120 _A_n Simple_repeat Simple_repeat 0.0
121 _CATA_n Simple_repeat Simple_repeat 0.0 121 _CATA_n Simple_repeat Simple_repeat 0.0
122 _CTTTT_n Simple_repeat Simple_repeat 0.0 122 _CTTTT_n Simple_repeat Simple_repeat 0.0
123 _GAGAA_n Simple_repeat Simple_repeat 45.17 123 _GAGAA_n Simple_repeat Simple_repeat 45.5
124 _GCCTTT_n Simple_repeat Simple_repeat 0.0 124 _GCCTTT_n Simple_repeat Simple_repeat 0.0
125 _TAATAT_n Simple_repeat Simple_repeat 0.0 125 _TAATAT_n Simple_repeat Simple_repeat 0.0
126 _TAATA_n Simple_repeat Simple_repeat 0.0 126 _TAATA_n Simple_repeat Simple_repeat 0.0
127 _TATAAAA_n Simple_repeat Simple_repeat 0.0 127 _TATAAAA_n Simple_repeat Simple_repeat 0.0
128 _TATAA_n Simple_repeat Simple_repeat 0.0 128 _TATAA_n Simple_repeat Simple_repeat 0.0