Mercurial > repos > artbio > repenrich2
diff test-data/chrY_paired_fraction_counts.tab @ 9:2b61c6407efb draft default tip
planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/main/tools/repenrich2 commit 961a14cd73dd8e40b2f30d5e4df136b98cd8f07a
| author | artbio |
|---|---|
| date | Thu, 25 Apr 2024 16:22:34 +0000 |
| parents | 567549a49eb2 |
| children |
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--- a/test-data/chrY_paired_fraction_counts.tab Thu Apr 25 09:06:48 2024 +0000 +++ b/test-data/chrY_paired_fraction_counts.tab Thu Apr 25 16:22:34 2024 +0000 @@ -8,8 +8,8 @@ BS2 LINE Jockey 58.0 BURDOCK_I-int LTR Gypsy 0.0 Baggins1 LINE LOA 0.0 -Bica_I-int LTR Gypsy 49.0 -Bica_LTR LTR Gypsy 1.0 +Bica_I-int LTR Gypsy 50.0 +Bica_LTR LTR Gypsy 0.0 CIRCE LTR Gypsy 0.0 Chouto_I-int LTR Gypsy 1.5 Copia1-I_DM LTR Copia 0.0 @@ -37,7 +37,7 @@ G5A_DM LINE Jockey 0.0 G5_DM LINE Jockey 0.0 G6_DM LINE Jockey 0.0 -GA-rich Low_complexity Low_complexity 0.67 +GA-rich Low_complexity Low_complexity 0.0 GTWIN_I-int LTR Gypsy 12.5 G_DM LINE Jockey 0.0 Gypsy11_I-int LTR Gypsy 0.0 @@ -48,7 +48,7 @@ Gypsy3_LTR LTR Gypsy 0.0 Gypsy4_I-int LTR Gypsy 0.0 Gypsy5_I-int LTR Gypsy 0.0 -Gypsy6A_LTR LTR Gypsy 1.0 +Gypsy6A_LTR LTR Gypsy 0.0 Gypsy6_I-int LTR Gypsy 31.0 Gypsy8_I-int LTR Gypsy 0.0 Gypsy8_LTR LTR Gypsy 0.0 @@ -73,29 +73,29 @@ MAX_LTR LTR Pao 2.0 MDG1_I-int LTR Gypsy 0.0 MDG1_LTR LTR Gypsy 0.0 -MDG3_I-int LTR Gypsy 156.5 -MDG3_LTR LTR Gypsy 2.5 +MDG3_I-int LTR Gypsy 156.0 +MDG3_LTR LTR Gypsy 3.0 MICROPIA_I-int LTR Gypsy 51.0 MICROPIA_LTR LTR Gypsy 2.0 Mariner2_DM DNA TcMar-Tc1 0.0 NINJA_I-int LTR Pao 0.0 NOMAD_I-int LTR Gypsy 0.0 -PROTOP_A DNA P 50.0 -PROTOP_B DNA P 10.0 +PROTOP_A DNA P 55.0 +PROTOP_B DNA P 5.0 QUASIMODO2-I_DM LTR Gypsy 43.0 QUASIMODO2-LTR_DM LTR Gypsy 0.0 -QUASIMODO_I-int LTR Gypsy 108.0 -QUASIMODO_LTR LTR Gypsy 23.0 +QUASIMODO_I-int LTR Gypsy 105.0 +QUASIMODO_LTR LTR Gypsy 25.0 R1_DM LINE R1 0.0 ROOA_I-int LTR Pao 0.0 ROOA_LTR LTR Pao 0.0 ROVER-I_DM LTR Gypsy 414.0 -ROVER-LTR_DM LTR Gypsy 6.0 +ROVER-LTR_DM LTR Gypsy 5.0 S2_DM DNA TcMar-Tc1 0.0 -STALKER4_I-int LTR Gypsy 143.5 +STALKER4_I-int LTR Gypsy 146.5 STALKER4_LTR LTR Gypsy 25.0 S_DM DNA TcMar-Tc1 53.0 -Stalker2_I-int LTR Gypsy 103.0 +Stalker2_I-int LTR Gypsy 99.0 Stalker2_LTR LTR Gypsy 3.0 TART-A LINE Jockey 4.0 TART_B1 LINE Jockey 21.0 @@ -109,7 +109,7 @@ _AAT_n Simple_repeat Simple_repeat 0.0 _ACAATAG_n Simple_repeat Simple_repeat 0.0 _ACC_n Simple_repeat Simple_repeat 0.0 -_AGAGAAG_n Simple_repeat Simple_repeat 2.17 +_AGAGAAG_n Simple_repeat Simple_repeat 2.5 _AGAGA_n Simple_repeat Simple_repeat 43.0 _ATAAT_n Simple_repeat Simple_repeat 0.0 _ATATATT_n Simple_repeat Simple_repeat 0.0 @@ -120,7 +120,7 @@ _A_n Simple_repeat Simple_repeat 0.0 _CATA_n Simple_repeat Simple_repeat 0.0 _CTTTT_n Simple_repeat Simple_repeat 0.0 -_GAGAA_n Simple_repeat Simple_repeat 45.17 +_GAGAA_n Simple_repeat Simple_repeat 45.5 _GCCTTT_n Simple_repeat Simple_repeat 0.0 _TAATAT_n Simple_repeat Simple_repeat 0.0 _TAATA_n Simple_repeat Simple_repeat 0.0