Mercurial > repos > artbio > repenrich2
comparison test-data/chrY_paired_fraction_counts.tab @ 6:388a47ca4199 draft
planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/main/tools/repenrich2 commit a9af1284d644055565b6cf3401569694218ab8e9
| author | artbio |
|---|---|
| date | Mon, 22 Apr 2024 10:31:50 +0000 |
| parents | 4905a332a094 |
| children | 567549a49eb2 |
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| 5:08e50af788f7 | 6:388a47ca4199 |
|---|---|
| 1 A-rich Low_complexity Low_complexity 0.0 | 1 A-rich Low_complexity Low_complexity 4.24 |
| 2 ACCORD2_I-int LTR Gypsy 0.0 | 2 ACCORD2_I-int LTR Gypsy 4.24 |
| 3 ACCORD2_LTR LTR Gypsy 0.0 | 3 ACCORD2_LTR LTR Gypsy 4.24 |
| 4 ACCORD_I-int LTR Gypsy 0.0 | 4 ACCORD_I-int LTR Gypsy 4.24 |
| 5 BARI1 DNA TcMar-Tc1 0.0 | 5 BARI1 DNA TcMar-Tc1 4.24 |
| 6 BATUMI_LTR LTR Pao 0.0 | 6 BATUMI_LTR LTR Pao 4.24 |
| 7 BS LINE Jockey 0.0 | 7 BS LINE Jockey 4.24 |
| 8 BS2 LINE Jockey 58.0 | 8 BS2 LINE Jockey 62.24 |
| 9 BURDOCK_I-int LTR Gypsy 0.0 | 9 BURDOCK_I-int LTR Gypsy 4.24 |
| 10 Baggins1 LINE LOA 0.0 | 10 Baggins1 LINE LOA 4.24 |
| 11 Bica_I-int LTR Gypsy 38.0 | 11 Bica_I-int LTR Gypsy 42.24 |
| 12 Bica_LTR LTR Gypsy 0.0 | 12 Bica_LTR LTR Gypsy 4.24 |
| 13 CIRCE LTR Gypsy 0.0 | 13 CIRCE LTR Gypsy 4.24 |
| 14 Chouto_I-int LTR Gypsy 0.0 | 14 Chouto_I-int LTR Gypsy 4.24 |
| 15 Copia1-I_DM LTR Copia 0.0 | 15 Copia1-I_DM LTR Copia 4.24 |
| 16 Copia_I-int LTR Copia 25181.0 | 16 Copia_I-int LTR Copia 25185.24 |
| 17 Copia_LTR LTR Copia 647.0 | 17 Copia_LTR LTR Copia 651.24 |
| 18 DIVER2_I-int LTR Pao 0.0 | 18 DIVER2_I-int LTR Pao 4.24 |
| 19 DIVER2_LTR LTR Pao 0.0 | 19 DIVER2_LTR LTR Pao 4.24 |
| 20 DM1731_I-int LTR Copia 6.0 | 20 DM1731_I-int LTR Copia 10.24 |
| 21 DM1731_LTR LTR Copia 0.0 | 21 DM1731_LTR LTR Copia 4.24 |
| 22 DM176_I-int LTR Gypsy 0.0 | 22 DM176_I-int LTR Gypsy 4.24 |
| 23 DM412 LTR Gypsy 0.0 | 23 DM412 LTR Gypsy 4.24 |
| 24 DM412B_LTR LTR Gypsy 0.0 | 24 DM412B_LTR LTR Gypsy 4.24 |
| 25 DMCR1A LINE CR1 4.0 | 25 DMCR1A LINE CR1 8.24 |
| 26 DMLTR5 LTR Gypsy 0.0 | 26 DMLTR5 LTR Gypsy 4.24 |
| 27 DMRT1A LINE R1 0.0 | 27 DMRT1A LINE R1 4.24 |
| 28 DMRT1B LINE R1 86.0 | 28 DMRT1B LINE R1 90.24 |
| 29 DMRT1C LINE R1 0.0 | 29 DMRT1C LINE R1 4.24 |
| 30 DNAREP1_DM RC Helitron 0.0 | 30 DNAREP1_DM RC Helitron 4.24 |
| 31 DOC2_DM LINE Jockey 0.0 | 31 DOC2_DM LINE Jockey 4.24 |
| 32 DOC3_DM LINE Jockey 0.0 | 32 DOC3_DM LINE Jockey 4.24 |
| 33 FB4_DM DNA TcMar-Tc1 38.0 | 33 FB4_DM DNA TcMar-Tc1 42.24 |
| 34 FROGGER_I-int LTR Copia 0.0 | 34 FROGGER_I-int LTR Copia 4.24 |
| 35 FW2_DM LINE Jockey 0.0 | 35 FW2_DM LINE Jockey 4.24 |
| 36 G3_DM LINE Jockey 0.0 | 36 G3_DM LINE Jockey 4.24 |
| 37 G5A_DM LINE Jockey 0.0 | 37 G5A_DM LINE Jockey 4.24 |
| 38 G5_DM LINE Jockey 0.0 | 38 G5_DM LINE Jockey 4.24 |
| 39 G6_DM LINE Jockey 0.0 | 39 G6_DM LINE Jockey 4.24 |
| 40 GA-rich Low_complexity Low_complexity 0.0 | 40 GA-rich Low_complexity Low_complexity 4.24 |
| 41 GTWIN_I-int LTR Gypsy 0.0 | 41 GTWIN_I-int LTR Gypsy 4.24 |
| 42 G_DM LINE Jockey 0.0 | 42 G_DM LINE Jockey 4.24 |
| 43 Gypsy11_I-int LTR Gypsy 0.0 | 43 Gypsy11_I-int LTR Gypsy 4.24 |
| 44 Gypsy11_LTR LTR Gypsy 0.0 | 44 Gypsy11_LTR LTR Gypsy 4.24 |
| 45 Gypsy12_LTR LTR Gypsy 0.0 | 45 Gypsy12_LTR LTR Gypsy 4.24 |
| 46 Gypsy2-I_DM LTR Gypsy 2.0 | 46 Gypsy2-I_DM LTR Gypsy 6.24 |
| 47 Gypsy2-LTR_DM LTR Gypsy 0.0 | 47 Gypsy2-LTR_DM LTR Gypsy 4.24 |
| 48 Gypsy3_LTR LTR Gypsy 0.0 | 48 Gypsy3_LTR LTR Gypsy 4.24 |
| 49 Gypsy4_I-int LTR Gypsy 0.0 | 49 Gypsy4_I-int LTR Gypsy 4.24 |
| 50 Gypsy5_I-int LTR Gypsy 0.0 | 50 Gypsy5_I-int LTR Gypsy 4.24 |
| 51 Gypsy6A_LTR LTR Gypsy 0.0 | 51 Gypsy6A_LTR LTR Gypsy 4.24 |
| 52 Gypsy6_I-int LTR Gypsy 26.0 | 52 Gypsy6_I-int LTR Gypsy 30.24 |
| 53 Gypsy8_I-int LTR Gypsy 0.0 | 53 Gypsy8_I-int LTR Gypsy 4.24 |
| 54 Gypsy8_LTR LTR Gypsy 0.0 | 54 Gypsy8_LTR LTR Gypsy 4.24 |
| 55 Gypsy9_I-int LTR Gypsy 0.0 | 55 Gypsy9_I-int LTR Gypsy 4.24 |
| 56 Gypsy_I-int LTR Gypsy 32.0 | 56 Gypsy_I-int LTR Gypsy 36.24 |
| 57 Gypsy_LTR LTR Gypsy 1.0 | 57 Gypsy_LTR LTR Gypsy 5.24 |
| 58 HELENA_RT LINE Jockey 0.0 | 58 HELENA_RT LINE Jockey 4.24 |
| 59 HETA LINE Jockey 24.0 | 59 HETA LINE Jockey 28.24 |
| 60 HMSBEAGLE_I-int LTR Gypsy 2.0 | 60 HMSBEAGLE_I-int LTR Gypsy 6.24 |
| 61 IDEFIX_I-int LTR Gypsy 4.0 | 61 IDEFIX_I-int LTR Gypsy 8.24 |
| 62 IDEFIX_LTR LTR Gypsy 0.0 | 62 IDEFIX_LTR LTR Gypsy 4.24 |
| 63 Invader1_I-int LTR Gypsy 0.0 | 63 Invader1_I-int LTR Gypsy 4.24 |
| 64 Invader1_LTR LTR Gypsy 0.0 | 64 Invader1_LTR LTR Gypsy 4.24 |
| 65 Invader2_I-int LTR Gypsy 0.0 | 65 Invader2_I-int LTR Gypsy 4.24 |
| 66 Invader4_I-int LTR Gypsy 0.0 | 66 Invader4_I-int LTR Gypsy 4.24 |
| 67 Invader4_LTR LTR Gypsy 0.0 | 67 Invader4_LTR LTR Gypsy 4.24 |
| 68 Invader5_I-int LTR Gypsy 0.0 | 68 Invader5_I-int LTR Gypsy 4.24 |
| 69 Invader5_LTR LTR Gypsy 0.0 | 69 Invader5_LTR LTR Gypsy 4.24 |
| 70 Invader6_I-int LTR Gypsy 0.0 | 70 Invader6_I-int LTR Gypsy 4.24 |
| 71 Invader6_LTR LTR Gypsy 0.0 | 71 Invader6_LTR LTR Gypsy 4.24 |
| 72 MAX_I-int LTR Pao 49.0 | 72 MAX_I-int LTR Pao 53.24 |
| 73 MAX_LTR LTR Pao 2.0 | 73 MAX_LTR LTR Pao 6.24 |
| 74 MDG1_I-int LTR Gypsy 0.0 | 74 MDG1_I-int LTR Gypsy 4.24 |
| 75 MDG1_LTR LTR Gypsy 0.0 | 75 MDG1_LTR LTR Gypsy 4.24 |
| 76 MDG3_I-int LTR Gypsy 152.0 | 76 MDG3_I-int LTR Gypsy 156.24 |
| 77 MDG3_LTR LTR Gypsy 0.0 | 77 MDG3_LTR LTR Gypsy 4.24 |
| 78 MICROPIA_I-int LTR Gypsy 0.0 | 78 MICROPIA_I-int LTR Gypsy 4.24 |
| 79 MICROPIA_LTR LTR Gypsy 0.0 | 79 MICROPIA_LTR LTR Gypsy 4.24 |
| 80 Mariner2_DM DNA TcMar-Tc1 0.0 | 80 Mariner2_DM DNA TcMar-Tc1 4.24 |
| 81 NINJA_I-int LTR Pao 0.0 | 81 NINJA_I-int LTR Pao 4.24 |
| 82 NOMAD_I-int LTR Gypsy 0.0 | 82 NOMAD_I-int LTR Gypsy 4.24 |
| 83 PROTOP_A DNA P 32.0 | 83 PROTOP_A DNA P 36.24 |
| 84 PROTOP_B DNA P 0.0 | 84 PROTOP_B DNA P 4.24 |
| 85 QUASIMODO2-I_DM LTR Gypsy 42.0 | 85 QUASIMODO2-I_DM LTR Gypsy 46.24 |
| 86 QUASIMODO2-LTR_DM LTR Gypsy 0.0 | 86 QUASIMODO2-LTR_DM LTR Gypsy 4.24 |
| 87 QUASIMODO_I-int LTR Gypsy 10.0 | 87 QUASIMODO_I-int LTR Gypsy 14.24 |
| 88 QUASIMODO_LTR LTR Gypsy 2.0 | 88 QUASIMODO_LTR LTR Gypsy 6.24 |
| 89 R1_DM LINE R1 0.0 | 89 R1_DM LINE R1 4.24 |
| 90 ROOA_I-int LTR Pao 0.0 | 90 ROOA_I-int LTR Pao 4.24 |
| 91 ROOA_LTR LTR Pao 0.0 | 91 ROOA_LTR LTR Pao 4.24 |
| 92 ROVER-I_DM LTR Gypsy 381.0 | 92 ROVER-I_DM LTR Gypsy 385.24 |
| 93 ROVER-LTR_DM LTR Gypsy 2.0 | 93 ROVER-LTR_DM LTR Gypsy 6.24 |
| 94 S2_DM DNA TcMar-Tc1 0.0 | 94 S2_DM DNA TcMar-Tc1 4.24 |
| 95 STALKER4_I-int LTR Gypsy 77.0 | 95 STALKER4_I-int LTR Gypsy 81.24 |
| 96 STALKER4_LTR LTR Gypsy 4.0 | 96 STALKER4_LTR LTR Gypsy 8.24 |
| 97 S_DM DNA TcMar-Tc1 48.0 | 97 S_DM DNA TcMar-Tc1 52.24 |
| 98 Stalker2_I-int LTR Gypsy 80.0 | 98 Stalker2_I-int LTR Gypsy 84.24 |
| 99 Stalker2_LTR LTR Gypsy 2.0 | 99 Stalker2_LTR LTR Gypsy 6.24 |
| 100 TART-A LINE Jockey 4.0 | 100 TART-A LINE Jockey 8.24 |
| 101 TART_B1 LINE Jockey 19.0 | 101 TART_B1 LINE Jockey 23.24 |
| 102 TC1-2_DM DNA TcMar-Tc1 0.0 | 102 TC1-2_DM DNA TcMar-Tc1 4.24 |
| 103 TC1_DM DNA TcMar-Tc1 0.0 | 103 TC1_DM DNA TcMar-Tc1 4.24 |
| 104 TLD2 LTR Gypsy 0.0 | 104 TLD2 LTR Gypsy 4.24 |
| 105 TRANSIB1 DNA CMC-Transib 0.0 | 105 TRANSIB1 DNA CMC-Transib 4.24 |
| 106 TRANSIB2 DNA CMC-Transib 30.0 | 106 TRANSIB2 DNA CMC-Transib 34.24 |
| 107 ZAM_I-int LTR Gypsy 0.0 | 107 ZAM_I-int LTR Gypsy 4.24 |
| 108 _AACACA_n Simple_repeat Simple_repeat 0.0 | 108 _AACACA_n Simple_repeat Simple_repeat 4.24 |
| 109 _AAT_n Simple_repeat Simple_repeat 0.0 | 109 _AAT_n Simple_repeat Simple_repeat 4.24 |
| 110 _ACAATAG_n Simple_repeat Simple_repeat 0.0 | 110 _ACAATAG_n Simple_repeat Simple_repeat 4.24 |
| 111 _ACC_n Simple_repeat Simple_repeat 0.0 | 111 _ACC_n Simple_repeat Simple_repeat 4.24 |
| 112 _AGAGAAG_n Simple_repeat Simple_repeat 0.0 | 112 _AGAGAAG_n Simple_repeat Simple_repeat 4.24 |
| 113 _AGAGA_n Simple_repeat Simple_repeat 0.0 | 113 _AGAGA_n Simple_repeat Simple_repeat 4.24 |
| 114 _ATAAT_n Simple_repeat Simple_repeat 0.0 | 114 _ATAAT_n Simple_repeat Simple_repeat 4.24 |
| 115 _ATATATT_n Simple_repeat Simple_repeat 0.0 | 115 _ATATATT_n Simple_repeat Simple_repeat 4.24 |
| 116 _ATATTAT_n Simple_repeat Simple_repeat 0.0 | 116 _ATATTAT_n Simple_repeat Simple_repeat 4.24 |
| 117 _ATTTTT_n Simple_repeat Simple_repeat 0.0 | 117 _ATTTTT_n Simple_repeat Simple_repeat 4.24 |
| 118 _ATT_n Simple_repeat Simple_repeat 0.0 | 118 _ATT_n Simple_repeat Simple_repeat 4.24 |
| 119 _AT_n Simple_repeat Simple_repeat 0.0 | 119 _AT_n Simple_repeat Simple_repeat 4.24 |
| 120 _A_n Simple_repeat Simple_repeat 0.0 | 120 _A_n Simple_repeat Simple_repeat 4.24 |
| 121 _CATA_n Simple_repeat Simple_repeat 0.0 | 121 _CATA_n Simple_repeat Simple_repeat 4.24 |
| 122 _CTTTT_n Simple_repeat Simple_repeat 0.0 | 122 _CTTTT_n Simple_repeat Simple_repeat 4.24 |
| 123 _GAGAA_n Simple_repeat Simple_repeat 0.0 | 123 _GAGAA_n Simple_repeat Simple_repeat 4.24 |
| 124 _GCCTTT_n Simple_repeat Simple_repeat 0.0 | 124 _GCCTTT_n Simple_repeat Simple_repeat 4.24 |
| 125 _TAATAT_n Simple_repeat Simple_repeat 0.0 | 125 _TAATAT_n Simple_repeat Simple_repeat 4.24 |
| 126 _TAATA_n Simple_repeat Simple_repeat 0.0 | 126 _TAATA_n Simple_repeat Simple_repeat 4.24 |
| 127 _TATAAAA_n Simple_repeat Simple_repeat 0.0 | 127 _TATAAAA_n Simple_repeat Simple_repeat 4.24 |
| 128 _TATAA_n Simple_repeat Simple_repeat 0.0 | 128 _TATAA_n Simple_repeat Simple_repeat 4.24 |
| 129 _TATCATG_n Simple_repeat Simple_repeat 0.0 | 129 _TATCATG_n Simple_repeat Simple_repeat 4.24 |
| 130 _TA_n Simple_repeat Simple_repeat 0.0 | 130 _TA_n Simple_repeat Simple_repeat 4.24 |
| 131 _TGTTG_n Simple_repeat Simple_repeat 0.0 | 131 _TGTTG_n Simple_repeat Simple_repeat 4.24 |
| 132 _TTATATA_n Simple_repeat Simple_repeat 0.0 | 132 _TTATATA_n Simple_repeat Simple_repeat 4.24 |
| 133 _TTATAT_n Simple_repeat Simple_repeat 0.0 | 133 _TTATAT_n Simple_repeat Simple_repeat 4.24 |
| 134 _TTATA_n Simple_repeat Simple_repeat 0.0 | 134 _TTATA_n Simple_repeat Simple_repeat 4.24 |
| 135 _TTA_n Simple_repeat Simple_repeat 0.0 | 135 _TTA_n Simple_repeat Simple_repeat 4.24 |
| 136 _TTCTT_n Simple_repeat Simple_repeat 0.0 | 136 _TTCTT_n Simple_repeat Simple_repeat 4.24 |
| 137 _TTC_n Simple_repeat Simple_repeat 0.0 | 137 _TTC_n Simple_repeat Simple_repeat 4.24 |
| 138 _TTTAT_n Simple_repeat Simple_repeat 0.0 | 138 _TTTAT_n Simple_repeat Simple_repeat 4.24 |
| 139 _TTTA_n Simple_repeat Simple_repeat 0.0 | 139 _TTTA_n Simple_repeat Simple_repeat 4.24 |
| 140 _TTTC_n Simple_repeat Simple_repeat 0.0 | 140 _TTTC_n Simple_repeat Simple_repeat 4.24 |
| 141 _TTTGA_n Simple_repeat Simple_repeat 0.0 | 141 _TTTGA_n Simple_repeat Simple_repeat 4.24 |
| 142 _TTTTAG_n Simple_repeat Simple_repeat 0.0 | 142 _TTTTAG_n Simple_repeat Simple_repeat 4.24 |
| 143 _TTTTCTT_n Simple_repeat Simple_repeat 0.0 | 143 _TTTTCTT_n Simple_repeat Simple_repeat 4.24 |
| 144 _TTTTC_n Simple_repeat Simple_repeat 0.0 | 144 _TTTTC_n Simple_repeat Simple_repeat 4.24 |
| 145 _T_n Simple_repeat Simple_repeat 0.0 | 145 _T_n Simple_repeat Simple_repeat 4.24 |