Mercurial > repos > artbio > repenrich2
diff test-data/chrY_paired_fraction_counts.tab @ 6:388a47ca4199 draft
planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/main/tools/repenrich2 commit a9af1284d644055565b6cf3401569694218ab8e9
| author | artbio |
|---|---|
| date | Mon, 22 Apr 2024 10:31:50 +0000 |
| parents | 4905a332a094 |
| children | 567549a49eb2 |
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--- a/test-data/chrY_paired_fraction_counts.tab Sun Apr 21 21:52:40 2024 +0000 +++ b/test-data/chrY_paired_fraction_counts.tab Mon Apr 22 10:31:50 2024 +0000 @@ -1,145 +1,145 @@ -A-rich Low_complexity Low_complexity 0.0 -ACCORD2_I-int LTR Gypsy 0.0 -ACCORD2_LTR LTR Gypsy 0.0 -ACCORD_I-int LTR Gypsy 0.0 -BARI1 DNA TcMar-Tc1 0.0 -BATUMI_LTR LTR Pao 0.0 -BS LINE Jockey 0.0 -BS2 LINE Jockey 58.0 -BURDOCK_I-int LTR Gypsy 0.0 -Baggins1 LINE LOA 0.0 -Bica_I-int LTR Gypsy 38.0 -Bica_LTR LTR Gypsy 0.0 -CIRCE LTR Gypsy 0.0 -Chouto_I-int LTR Gypsy 0.0 -Copia1-I_DM LTR Copia 0.0 -Copia_I-int LTR Copia 25181.0 -Copia_LTR LTR Copia 647.0 -DIVER2_I-int LTR Pao 0.0 -DIVER2_LTR LTR Pao 0.0 -DM1731_I-int LTR Copia 6.0 -DM1731_LTR LTR Copia 0.0 -DM176_I-int LTR Gypsy 0.0 -DM412 LTR Gypsy 0.0 -DM412B_LTR LTR Gypsy 0.0 -DMCR1A LINE CR1 4.0 -DMLTR5 LTR Gypsy 0.0 -DMRT1A LINE R1 0.0 -DMRT1B LINE R1 86.0 -DMRT1C LINE R1 0.0 -DNAREP1_DM RC Helitron 0.0 -DOC2_DM LINE Jockey 0.0 -DOC3_DM LINE Jockey 0.0 -FB4_DM DNA TcMar-Tc1 38.0 -FROGGER_I-int LTR Copia 0.0 -FW2_DM LINE Jockey 0.0 -G3_DM LINE Jockey 0.0 -G5A_DM LINE Jockey 0.0 -G5_DM LINE Jockey 0.0 -G6_DM LINE Jockey 0.0 -GA-rich Low_complexity Low_complexity 0.0 -GTWIN_I-int LTR Gypsy 0.0 -G_DM LINE Jockey 0.0 -Gypsy11_I-int LTR Gypsy 0.0 -Gypsy11_LTR LTR Gypsy 0.0 -Gypsy12_LTR LTR Gypsy 0.0 -Gypsy2-I_DM LTR Gypsy 2.0 -Gypsy2-LTR_DM LTR Gypsy 0.0 -Gypsy3_LTR LTR Gypsy 0.0 -Gypsy4_I-int LTR Gypsy 0.0 -Gypsy5_I-int LTR Gypsy 0.0 -Gypsy6A_LTR LTR Gypsy 0.0 -Gypsy6_I-int LTR Gypsy 26.0 -Gypsy8_I-int LTR Gypsy 0.0 -Gypsy8_LTR LTR Gypsy 0.0 -Gypsy9_I-int LTR Gypsy 0.0 -Gypsy_I-int LTR Gypsy 32.0 -Gypsy_LTR LTR Gypsy 1.0 -HELENA_RT LINE Jockey 0.0 -HETA LINE Jockey 24.0 -HMSBEAGLE_I-int LTR Gypsy 2.0 -IDEFIX_I-int LTR Gypsy 4.0 -IDEFIX_LTR LTR Gypsy 0.0 -Invader1_I-int LTR Gypsy 0.0 -Invader1_LTR LTR Gypsy 0.0 -Invader2_I-int LTR Gypsy 0.0 -Invader4_I-int LTR Gypsy 0.0 -Invader4_LTR LTR Gypsy 0.0 -Invader5_I-int LTR Gypsy 0.0 -Invader5_LTR LTR Gypsy 0.0 -Invader6_I-int LTR Gypsy 0.0 -Invader6_LTR LTR Gypsy 0.0 -MAX_I-int LTR Pao 49.0 -MAX_LTR LTR Pao 2.0 -MDG1_I-int LTR Gypsy 0.0 -MDG1_LTR LTR Gypsy 0.0 -MDG3_I-int LTR Gypsy 152.0 -MDG3_LTR LTR Gypsy 0.0 -MICROPIA_I-int LTR Gypsy 0.0 -MICROPIA_LTR LTR Gypsy 0.0 -Mariner2_DM DNA TcMar-Tc1 0.0 -NINJA_I-int LTR Pao 0.0 -NOMAD_I-int LTR Gypsy 0.0 -PROTOP_A DNA P 32.0 -PROTOP_B DNA P 0.0 -QUASIMODO2-I_DM LTR Gypsy 42.0 -QUASIMODO2-LTR_DM LTR Gypsy 0.0 -QUASIMODO_I-int LTR Gypsy 10.0 -QUASIMODO_LTR LTR Gypsy 2.0 -R1_DM LINE R1 0.0 -ROOA_I-int LTR Pao 0.0 -ROOA_LTR LTR Pao 0.0 -ROVER-I_DM LTR Gypsy 381.0 -ROVER-LTR_DM LTR Gypsy 2.0 -S2_DM DNA TcMar-Tc1 0.0 -STALKER4_I-int LTR Gypsy 77.0 -STALKER4_LTR LTR Gypsy 4.0 -S_DM DNA TcMar-Tc1 48.0 -Stalker2_I-int LTR Gypsy 80.0 -Stalker2_LTR LTR Gypsy 2.0 -TART-A LINE Jockey 4.0 -TART_B1 LINE Jockey 19.0 -TC1-2_DM DNA TcMar-Tc1 0.0 -TC1_DM DNA TcMar-Tc1 0.0 -TLD2 LTR Gypsy 0.0 -TRANSIB1 DNA CMC-Transib 0.0 -TRANSIB2 DNA CMC-Transib 30.0 -ZAM_I-int LTR Gypsy 0.0 -_AACACA_n Simple_repeat Simple_repeat 0.0 -_AAT_n Simple_repeat Simple_repeat 0.0 -_ACAATAG_n Simple_repeat Simple_repeat 0.0 -_ACC_n Simple_repeat Simple_repeat 0.0 -_AGAGAAG_n Simple_repeat Simple_repeat 0.0 -_AGAGA_n Simple_repeat Simple_repeat 0.0 -_ATAAT_n Simple_repeat Simple_repeat 0.0 -_ATATATT_n Simple_repeat Simple_repeat 0.0 -_ATATTAT_n Simple_repeat Simple_repeat 0.0 -_ATTTTT_n Simple_repeat Simple_repeat 0.0 -_ATT_n Simple_repeat Simple_repeat 0.0 -_AT_n Simple_repeat Simple_repeat 0.0 -_A_n Simple_repeat Simple_repeat 0.0 -_CATA_n Simple_repeat Simple_repeat 0.0 -_CTTTT_n Simple_repeat Simple_repeat 0.0 -_GAGAA_n Simple_repeat Simple_repeat 0.0 -_GCCTTT_n Simple_repeat Simple_repeat 0.0 -_TAATAT_n Simple_repeat Simple_repeat 0.0 -_TAATA_n Simple_repeat Simple_repeat 0.0 -_TATAAAA_n Simple_repeat Simple_repeat 0.0 -_TATAA_n Simple_repeat Simple_repeat 0.0 -_TATCATG_n Simple_repeat Simple_repeat 0.0 -_TA_n Simple_repeat Simple_repeat 0.0 -_TGTTG_n Simple_repeat Simple_repeat 0.0 -_TTATATA_n Simple_repeat Simple_repeat 0.0 -_TTATAT_n Simple_repeat Simple_repeat 0.0 -_TTATA_n Simple_repeat Simple_repeat 0.0 -_TTA_n Simple_repeat Simple_repeat 0.0 -_TTCTT_n Simple_repeat Simple_repeat 0.0 -_TTC_n Simple_repeat Simple_repeat 0.0 -_TTTAT_n Simple_repeat Simple_repeat 0.0 -_TTTA_n Simple_repeat Simple_repeat 0.0 -_TTTC_n Simple_repeat Simple_repeat 0.0 -_TTTGA_n Simple_repeat Simple_repeat 0.0 -_TTTTAG_n Simple_repeat Simple_repeat 0.0 -_TTTTCTT_n Simple_repeat Simple_repeat 0.0 -_TTTTC_n Simple_repeat Simple_repeat 0.0 -_T_n Simple_repeat Simple_repeat 0.0 +A-rich Low_complexity Low_complexity 4.24 +ACCORD2_I-int LTR Gypsy 4.24 +ACCORD2_LTR LTR Gypsy 4.24 +ACCORD_I-int LTR Gypsy 4.24 +BARI1 DNA TcMar-Tc1 4.24 +BATUMI_LTR LTR Pao 4.24 +BS LINE Jockey 4.24 +BS2 LINE Jockey 62.24 +BURDOCK_I-int LTR Gypsy 4.24 +Baggins1 LINE LOA 4.24 +Bica_I-int LTR Gypsy 42.24 +Bica_LTR LTR Gypsy 4.24 +CIRCE LTR Gypsy 4.24 +Chouto_I-int LTR Gypsy 4.24 +Copia1-I_DM LTR Copia 4.24 +Copia_I-int LTR Copia 25185.24 +Copia_LTR LTR Copia 651.24 +DIVER2_I-int LTR Pao 4.24 +DIVER2_LTR LTR Pao 4.24 +DM1731_I-int LTR Copia 10.24 +DM1731_LTR LTR Copia 4.24 +DM176_I-int LTR Gypsy 4.24 +DM412 LTR Gypsy 4.24 +DM412B_LTR LTR Gypsy 4.24 +DMCR1A LINE CR1 8.24 +DMLTR5 LTR Gypsy 4.24 +DMRT1A LINE R1 4.24 +DMRT1B LINE R1 90.24 +DMRT1C LINE R1 4.24 +DNAREP1_DM RC Helitron 4.24 +DOC2_DM LINE Jockey 4.24 +DOC3_DM LINE Jockey 4.24 +FB4_DM DNA TcMar-Tc1 42.24 +FROGGER_I-int LTR Copia 4.24 +FW2_DM LINE Jockey 4.24 +G3_DM LINE Jockey 4.24 +G5A_DM LINE Jockey 4.24 +G5_DM LINE Jockey 4.24 +G6_DM LINE Jockey 4.24 +GA-rich Low_complexity Low_complexity 4.24 +GTWIN_I-int LTR Gypsy 4.24 +G_DM LINE Jockey 4.24 +Gypsy11_I-int LTR Gypsy 4.24 +Gypsy11_LTR LTR Gypsy 4.24 +Gypsy12_LTR LTR Gypsy 4.24 +Gypsy2-I_DM LTR Gypsy 6.24 +Gypsy2-LTR_DM LTR Gypsy 4.24 +Gypsy3_LTR LTR Gypsy 4.24 +Gypsy4_I-int LTR Gypsy 4.24 +Gypsy5_I-int LTR Gypsy 4.24 +Gypsy6A_LTR LTR Gypsy 4.24 +Gypsy6_I-int LTR Gypsy 30.24 +Gypsy8_I-int LTR Gypsy 4.24 +Gypsy8_LTR LTR Gypsy 4.24 +Gypsy9_I-int LTR Gypsy 4.24 +Gypsy_I-int LTR Gypsy 36.24 +Gypsy_LTR LTR Gypsy 5.24 +HELENA_RT LINE Jockey 4.24 +HETA LINE Jockey 28.24 +HMSBEAGLE_I-int LTR Gypsy 6.24 +IDEFIX_I-int LTR Gypsy 8.24 +IDEFIX_LTR LTR Gypsy 4.24 +Invader1_I-int LTR Gypsy 4.24 +Invader1_LTR LTR Gypsy 4.24 +Invader2_I-int LTR Gypsy 4.24 +Invader4_I-int LTR Gypsy 4.24 +Invader4_LTR LTR Gypsy 4.24 +Invader5_I-int LTR Gypsy 4.24 +Invader5_LTR LTR Gypsy 4.24 +Invader6_I-int LTR Gypsy 4.24 +Invader6_LTR LTR Gypsy 4.24 +MAX_I-int LTR Pao 53.24 +MAX_LTR LTR Pao 6.24 +MDG1_I-int LTR Gypsy 4.24 +MDG1_LTR LTR Gypsy 4.24 +MDG3_I-int LTR Gypsy 156.24 +MDG3_LTR LTR Gypsy 4.24 +MICROPIA_I-int LTR Gypsy 4.24 +MICROPIA_LTR LTR Gypsy 4.24 +Mariner2_DM DNA TcMar-Tc1 4.24 +NINJA_I-int LTR Pao 4.24 +NOMAD_I-int LTR Gypsy 4.24 +PROTOP_A DNA P 36.24 +PROTOP_B DNA P 4.24 +QUASIMODO2-I_DM LTR Gypsy 46.24 +QUASIMODO2-LTR_DM LTR Gypsy 4.24 +QUASIMODO_I-int LTR Gypsy 14.24 +QUASIMODO_LTR LTR Gypsy 6.24 +R1_DM LINE R1 4.24 +ROOA_I-int LTR Pao 4.24 +ROOA_LTR LTR Pao 4.24 +ROVER-I_DM LTR Gypsy 385.24 +ROVER-LTR_DM LTR Gypsy 6.24 +S2_DM DNA TcMar-Tc1 4.24 +STALKER4_I-int LTR Gypsy 81.24 +STALKER4_LTR LTR Gypsy 8.24 +S_DM DNA TcMar-Tc1 52.24 +Stalker2_I-int LTR Gypsy 84.24 +Stalker2_LTR LTR Gypsy 6.24 +TART-A LINE Jockey 8.24 +TART_B1 LINE Jockey 23.24 +TC1-2_DM DNA TcMar-Tc1 4.24 +TC1_DM DNA TcMar-Tc1 4.24 +TLD2 LTR Gypsy 4.24 +TRANSIB1 DNA CMC-Transib 4.24 +TRANSIB2 DNA CMC-Transib 34.24 +ZAM_I-int LTR Gypsy 4.24 +_AACACA_n Simple_repeat Simple_repeat 4.24 +_AAT_n Simple_repeat Simple_repeat 4.24 +_ACAATAG_n Simple_repeat Simple_repeat 4.24 +_ACC_n Simple_repeat Simple_repeat 4.24 +_AGAGAAG_n Simple_repeat Simple_repeat 4.24 +_AGAGA_n Simple_repeat Simple_repeat 4.24 +_ATAAT_n Simple_repeat Simple_repeat 4.24 +_ATATATT_n Simple_repeat Simple_repeat 4.24 +_ATATTAT_n Simple_repeat Simple_repeat 4.24 +_ATTTTT_n Simple_repeat Simple_repeat 4.24 +_ATT_n Simple_repeat Simple_repeat 4.24 +_AT_n Simple_repeat Simple_repeat 4.24 +_A_n Simple_repeat Simple_repeat 4.24 +_CATA_n Simple_repeat Simple_repeat 4.24 +_CTTTT_n Simple_repeat Simple_repeat 4.24 +_GAGAA_n Simple_repeat Simple_repeat 4.24 +_GCCTTT_n Simple_repeat Simple_repeat 4.24 +_TAATAT_n Simple_repeat Simple_repeat 4.24 +_TAATA_n Simple_repeat Simple_repeat 4.24 +_TATAAAA_n Simple_repeat Simple_repeat 4.24 +_TATAA_n Simple_repeat Simple_repeat 4.24 +_TATCATG_n Simple_repeat Simple_repeat 4.24 +_TA_n Simple_repeat Simple_repeat 4.24 +_TGTTG_n Simple_repeat Simple_repeat 4.24 +_TTATATA_n Simple_repeat Simple_repeat 4.24 +_TTATAT_n Simple_repeat Simple_repeat 4.24 +_TTATA_n Simple_repeat Simple_repeat 4.24 +_TTA_n Simple_repeat Simple_repeat 4.24 +_TTCTT_n Simple_repeat Simple_repeat 4.24 +_TTC_n Simple_repeat Simple_repeat 4.24 +_TTTAT_n Simple_repeat Simple_repeat 4.24 +_TTTA_n Simple_repeat Simple_repeat 4.24 +_TTTC_n Simple_repeat Simple_repeat 4.24 +_TTTGA_n Simple_repeat Simple_repeat 4.24 +_TTTTAG_n Simple_repeat Simple_repeat 4.24 +_TTTTCTT_n Simple_repeat Simple_repeat 4.24 +_TTTTC_n Simple_repeat Simple_repeat 4.24 +_T_n Simple_repeat Simple_repeat 4.24