Mercurial > repos > artbio > rsem

comparison test-data/de_gene_abundances.tab @ 4:1823c8e07d96 draft

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planemo upload for repository https://github.com/artbio/tools-artbio/tree/master/tools/rsem commit a3df058f7bb29ae3d42b85d6e911b68679150c9f
author artbio
date Fri, 01 Jun 2018 03:00:34 -0400
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comparison
equal deleted inserted replaced
3:26ead8419b63 4:1823c8e07d96
1 gene_id transcript_id(s) length effective_length expected_count TPM FPKM
2 ENSG00000185097 ENST00000332831 995.00 783.00 0.00 0.00 0.00
3 ENSG00000186092 ENST00000335137 918.00 706.00 0.00 0.00 0.00
4 ENSG00000198744 ENST00000416718 547.00 335.00 0.00 0.00 0.00
5 ENSG00000222623 ENST00000410691 104.00 0.00 0.00 0.00 0.00
6 ENSG00000223181 ENST00000411249 104.00 0.00 0.00 0.00 0.00
7 ENSG00000223659 ENST00000452176 802.00 590.00 0.00 0.00 0.00
8 ENSG00000223972 ENST00000450305,ENST00000456328,ENST00000515242,ENST00000518655 1356.25 1144.25 0.00 0.00 0.00
9 ENSG00000224813 ENST00000445840 180.00 0.00 0.00 0.00 0.00
10 ENSG00000224956 ENST00000506640 1236.00 1024.00 0.00 0.00 0.00
11 ENSG00000225630 ENST00000457540 1044.00 832.00 0.00 0.00 0.00
12 ENSG00000225972 ENST00000416931 372.00 160.00 0.00 0.00 0.00
13 ENSG00000227232 ENST00000423562,ENST00000438504,ENST00000488147,ENST00000538476,ENST00000541675 1560.40 1348.40 0.00 0.00 0.00
14 ENSG00000228327 ENST00000428504 1317.00 1105.00 0.00 0.00 0.00
15 ENSG00000228463 ENST00000335577,ENST00000424587,ENST00000442116,ENST00000448958 1496.00 1284.00 0.00 0.00 0.00
16 ENSG00000229344 ENST00000427426 682.00 470.00 0.00 0.00 0.00
17 ENSG00000229376 ENST00000440782 2455.00 2243.00 0.00 0.00 0.00
18 ENSG00000229905 ENST00000422528 456.00 244.00 0.00 0.00 0.00
19 ENSG00000230021 ENST00000414688,ENST00000419394,ENST00000440200,ENST00000441245,ENST00000447954,ENST00000448605 496.33 284.33 0.00 0.00 0.00
20 ENSG00000230092 ENST00000447500,ENST00000590817 523.00 311.00 0.00 0.00 0.00
21 ENSG00000231709 ENST00000417636 842.00 630.00 0.00 0.00 0.00
22 ENSG00000233653 ENST00000432723 2477.00 2265.00 0.00 0.00 0.00
23 ENSG00000233750 ENST00000442987 3812.00 3600.00 0.00 0.00 0.00
24 ENSG00000235146 ENST00000423796,ENST00000450696 504.50 292.50 0.00 0.00 0.00
25 ENSG00000235249 ENST00000426406 995.00 783.00 0.00 0.00 0.00
26 ENSG00000235373 ENST00000416385 4860.00 4648.00 1.00 500000.00 107573.15
27 ENSG00000236601 ENST00000412666,ENST00000450983 516.50 304.50 0.00 0.00 0.00
28 ENSG00000236679 ENST00000458203 385.00 173.00 0.00 0.00 0.00
29 ENSG00000236743 ENST00000441866 676.00 464.00 0.00 0.00 0.00
30 ENSG00000237094 ENST00000419160,ENST00000423728,ENST00000425496,ENST00000431321,ENST00000431812,ENST00000432964,ENST00000440038,ENST00000440163,ENST00000453935,ENST00000455207,ENST00000455464,ENST00000599771,ENST00000601486,ENST00000601814 700.00 488.00 0.00 0.00 0.00
31 ENSG00000237491 ENST00000358533,ENST00000412115,ENST00000429505,ENST00000434264,ENST00000443772,ENST00000457084,ENST00000585745,ENST00000585768,ENST00000585826,ENST00000586288,ENST00000586928,ENST00000587126,ENST00000587530,ENST00000588951,ENST00000589531,ENST00000589899,ENST00000590848,ENST00000591440,ENST00000591702,ENST00000592547,ENST00000593022 689.90 480.00 0.00 0.00 0.00
32 ENSG00000237613 ENST00000417324,ENST00000461467 888.50 676.50 0.00 0.00 0.00
33 ENSG00000237683 ENST00000423372 2661.00 2449.00 0.00 0.00 0.00
34 ENSG00000237973 ENST00000414273 1543.00 1331.00 0.00 0.00 0.00
35 ENSG00000238009 ENST00000453576,ENST00000466430,ENST00000471248,ENST00000477740 1051.00 839.00 0.00 0.00 0.00
36 ENSG00000239664 ENST00000357876,ENST00000440196 468.50 256.50 0.00 0.00 0.00
37 ENSG00000239906 ENST00000493797 323.00 111.00 0.00 0.00 0.00
38 ENSG00000239945 ENST00000495576 1319.00 1107.00 0.00 0.00 0.00
39 ENSG00000240361 ENST00000492842 940.00 728.00 0.00 0.00 0.00
40 ENSG00000240409 ENST00000467115 207.00 0.00 0.00 0.00 0.00
41 ENSG00000240453 ENST00000435300 402.00 190.00 0.00 0.00 0.00
42 ENSG00000240618 ENST00000417659 295.00 83.00 0.00 0.00 0.00
43 ENSG00000241599 ENST00000496488 457.00 245.00 0.00 0.00 0.00
44 ENSG00000241670 ENST00000424429,ENST00000450734 410.00 198.00 0.00 0.00 0.00
45 ENSG00000241860 ENST00000466557,ENST00000484859,ENST00000490997,ENST00000491962 4860.00 4648.00 1.00 500000.00 107573.15
46 ENSG00000243485 ENST00000469289,ENST00000473358,ENST00000607096 461.67 274.33 0.00 0.00 0.00
47 ENSG00000248527 ENST00000514057 681.00 469.00 0.00 0.00 0.00
48 ENSG00000250575 ENST00000514436 1239.00 1027.00 0.00 0.00 0.00
49 ENSG00000256186 ENST00000540477 90.00 0.00 0.00 0.00 0.00
50 ENSG00000268020 ENST00000594647,ENST00000606857 483.00 314.00 0.00 0.00 0.00
51 ENSG00000268663 ENST00000438434 424.00 212.00 0.00 0.00 0.00
52 ENSG00000268903 ENST00000494149 755.00 543.00 0.00 0.00 0.00
53 ENSG00000269732 ENST00000437905 363.00 151.00 0.00 0.00 0.00
54 ENSG00000269831 ENST00000599533 129.00 0.00 0.00 0.00 0.00
55 ENSG00000269981 ENST00000595919 284.00 72.00 0.00 0.00 0.00