Mercurial > repos > artbio > rsem
diff test-data/de_gene_abundances.tab @ 4:1823c8e07d96 draft
planemo upload for repository https://github.com/artbio/tools-artbio/tree/master/tools/rsem commit a3df058f7bb29ae3d42b85d6e911b68679150c9f
| author | artbio |
|---|---|
| date | Fri, 01 Jun 2018 03:00:34 -0400 |
| parents | |
| children |
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--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/test-data/de_gene_abundances.tab Fri Jun 01 03:00:34 2018 -0400 @@ -0,0 +1,55 @@ +gene_id transcript_id(s) length effective_length expected_count TPM FPKM +ENSG00000185097 ENST00000332831 995.00 783.00 0.00 0.00 0.00 +ENSG00000186092 ENST00000335137 918.00 706.00 0.00 0.00 0.00 +ENSG00000198744 ENST00000416718 547.00 335.00 0.00 0.00 0.00 +ENSG00000222623 ENST00000410691 104.00 0.00 0.00 0.00 0.00 +ENSG00000223181 ENST00000411249 104.00 0.00 0.00 0.00 0.00 +ENSG00000223659 ENST00000452176 802.00 590.00 0.00 0.00 0.00 +ENSG00000223972 ENST00000450305,ENST00000456328,ENST00000515242,ENST00000518655 1356.25 1144.25 0.00 0.00 0.00 +ENSG00000224813 ENST00000445840 180.00 0.00 0.00 0.00 0.00 +ENSG00000224956 ENST00000506640 1236.00 1024.00 0.00 0.00 0.00 +ENSG00000225630 ENST00000457540 1044.00 832.00 0.00 0.00 0.00 +ENSG00000225972 ENST00000416931 372.00 160.00 0.00 0.00 0.00 +ENSG00000227232 ENST00000423562,ENST00000438504,ENST00000488147,ENST00000538476,ENST00000541675 1560.40 1348.40 0.00 0.00 0.00 +ENSG00000228327 ENST00000428504 1317.00 1105.00 0.00 0.00 0.00 +ENSG00000228463 ENST00000335577,ENST00000424587,ENST00000442116,ENST00000448958 1496.00 1284.00 0.00 0.00 0.00 +ENSG00000229344 ENST00000427426 682.00 470.00 0.00 0.00 0.00 +ENSG00000229376 ENST00000440782 2455.00 2243.00 0.00 0.00 0.00 +ENSG00000229905 ENST00000422528 456.00 244.00 0.00 0.00 0.00 +ENSG00000230021 ENST00000414688,ENST00000419394,ENST00000440200,ENST00000441245,ENST00000447954,ENST00000448605 496.33 284.33 0.00 0.00 0.00 +ENSG00000230092 ENST00000447500,ENST00000590817 523.00 311.00 0.00 0.00 0.00 +ENSG00000231709 ENST00000417636 842.00 630.00 0.00 0.00 0.00 +ENSG00000233653 ENST00000432723 2477.00 2265.00 0.00 0.00 0.00 +ENSG00000233750 ENST00000442987 3812.00 3600.00 0.00 0.00 0.00 +ENSG00000235146 ENST00000423796,ENST00000450696 504.50 292.50 0.00 0.00 0.00 +ENSG00000235249 ENST00000426406 995.00 783.00 0.00 0.00 0.00 +ENSG00000235373 ENST00000416385 4860.00 4648.00 1.00 500000.00 107573.15 +ENSG00000236601 ENST00000412666,ENST00000450983 516.50 304.50 0.00 0.00 0.00 +ENSG00000236679 ENST00000458203 385.00 173.00 0.00 0.00 0.00 +ENSG00000236743 ENST00000441866 676.00 464.00 0.00 0.00 0.00 +ENSG00000237094 ENST00000419160,ENST00000423728,ENST00000425496,ENST00000431321,ENST00000431812,ENST00000432964,ENST00000440038,ENST00000440163,ENST00000453935,ENST00000455207,ENST00000455464,ENST00000599771,ENST00000601486,ENST00000601814 700.00 488.00 0.00 0.00 0.00 +ENSG00000237491 ENST00000358533,ENST00000412115,ENST00000429505,ENST00000434264,ENST00000443772,ENST00000457084,ENST00000585745,ENST00000585768,ENST00000585826,ENST00000586288,ENST00000586928,ENST00000587126,ENST00000587530,ENST00000588951,ENST00000589531,ENST00000589899,ENST00000590848,ENST00000591440,ENST00000591702,ENST00000592547,ENST00000593022 689.90 480.00 0.00 0.00 0.00 +ENSG00000237613 ENST00000417324,ENST00000461467 888.50 676.50 0.00 0.00 0.00 +ENSG00000237683 ENST00000423372 2661.00 2449.00 0.00 0.00 0.00 +ENSG00000237973 ENST00000414273 1543.00 1331.00 0.00 0.00 0.00 +ENSG00000238009 ENST00000453576,ENST00000466430,ENST00000471248,ENST00000477740 1051.00 839.00 0.00 0.00 0.00 +ENSG00000239664 ENST00000357876,ENST00000440196 468.50 256.50 0.00 0.00 0.00 +ENSG00000239906 ENST00000493797 323.00 111.00 0.00 0.00 0.00 +ENSG00000239945 ENST00000495576 1319.00 1107.00 0.00 0.00 0.00 +ENSG00000240361 ENST00000492842 940.00 728.00 0.00 0.00 0.00 +ENSG00000240409 ENST00000467115 207.00 0.00 0.00 0.00 0.00 +ENSG00000240453 ENST00000435300 402.00 190.00 0.00 0.00 0.00 +ENSG00000240618 ENST00000417659 295.00 83.00 0.00 0.00 0.00 +ENSG00000241599 ENST00000496488 457.00 245.00 0.00 0.00 0.00 +ENSG00000241670 ENST00000424429,ENST00000450734 410.00 198.00 0.00 0.00 0.00 +ENSG00000241860 ENST00000466557,ENST00000484859,ENST00000490997,ENST00000491962 4860.00 4648.00 1.00 500000.00 107573.15 +ENSG00000243485 ENST00000469289,ENST00000473358,ENST00000607096 461.67 274.33 0.00 0.00 0.00 +ENSG00000248527 ENST00000514057 681.00 469.00 0.00 0.00 0.00 +ENSG00000250575 ENST00000514436 1239.00 1027.00 0.00 0.00 0.00 +ENSG00000256186 ENST00000540477 90.00 0.00 0.00 0.00 0.00 +ENSG00000268020 ENST00000594647,ENST00000606857 483.00 314.00 0.00 0.00 0.00 +ENSG00000268663 ENST00000438434 424.00 212.00 0.00 0.00 0.00 +ENSG00000268903 ENST00000494149 755.00 543.00 0.00 0.00 0.00 +ENSG00000269732 ENST00000437905 363.00 151.00 0.00 0.00 0.00 +ENSG00000269831 ENST00000599533 129.00 0.00 0.00 0.00 0.00 +ENSG00000269981 ENST00000595919 284.00 72.00 0.00 0.00 0.00