Mercurial > repos > artbio > sequence_format_converter
changeset 3:772bd67ef26a draft
"planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/sequence_format_converter commit 07c73df696d6d80e03f03232603d713882131625"
| author | artbio |
|---|---|
| date | Mon, 11 May 2020 19:58:45 -0400 |
| parents | f1d59113125a |
| children | 1c14d2869d4d |
| files | sequence_format_converter.py sequence_format_converter.xml |
| diffstat | 2 files changed, 2 insertions(+), 2 deletions(-) [+] |
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--- a/sequence_format_converter.py Tue Feb 20 12:13:40 2018 -0500 +++ b/sequence_format_converter.py Mon May 11 19:58:45 2020 -0400 @@ -38,7 +38,7 @@ reference = ['A', 'T', 'G', 'C', 'N'] format = '' try: - for l in range(4): + for n in range(4): block.append(input.readline()[:-1]) except IndexError: logging.info("File hasn't at leat four lines !")
--- a/sequence_format_converter.xml Tue Feb 20 12:13:40 2018 -0500 +++ b/sequence_format_converter.xml Mon May 11 19:58:45 2020 -0400 @@ -1,4 +1,4 @@ -<tool id="sequence_format_converter" name="sequence_format_converter" version="2.1.1"> +<tool id="sequence_format_converter" name="sequence_format_converter" version="2.1.2"> <description></description> <command><![CDATA[ #if $input.is_of_type('fastq.gz'):