Mercurial > repos > artbio > small_rna_maps

diff small_rna_maps.py @ 32:f2e7ad3058e8 draft

Find changesets by keywords (author, files, the commit message), revision number or hash, or revset expression.
"planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/small_rna_maps commit 51dc6c56c7d95fc229ffee958354211cd454fd36"
author artbio
date Sun, 09 May 2021 17:11:00 +0000
parents f82badb66c34
children
line wrap: on
line diff
--- a/small_rna_maps.py	Sun Oct 06 21:11:19 2019 -0400
+++ b/small_rna_maps.py	Sun May 09 17:11:00 2021 +0000
@@ -319,8 +319,8 @@
                 Strandbias = round(strandness['F'] / float(Strandbias), 2)
             else:
                 Strandbias = 2
-            Mean = numpy.mean(sizeness.values())
-            StDev = numpy.std(sizeness.values())
+            Mean = numpy.mean(list(sizeness.values()))
+            StDev = numpy.std(list(sizeness.values()))
             for size in sizeness:
                 if StDev:
                     sizeness[size] = (sizeness[size] - Mean) / StDev