Mercurial > repos > artbio > small_rna_signatures

diff test-data/paired_2.fa @ 5:a7fd04208764 draft

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planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/small_rna_signatures commit 24d44a9b7ec9db4dce3d839b597eea2b1be34adb
author artbio
date Sat, 09 Sep 2017 11:57:39 -0400
parents 4d9682bd3a6b
children
line wrap: on
line diff
--- a/test-data/paired_2.fa	Fri Sep 08 04:44:22 2017 -0400
+++ b/test-data/paired_2.fa	Sat Sep 09 11:57:39 2017 -0400
@@ -1,370 +1,416 @@
->FBgn0000004_17.6|5844|R|21|n=1
+>FBgn0000004_17.6|coord=5844|strand -|size=21|nreads=1
 TTTTCGTCAAGTGTGCTAAAT
->FBgn0000004_17.6|5855|F|23|n=1
+>FBgn0000004_17.6|coord=5855|strand +|size=23|nreads=1
 TTGACGAAAATGATCGAGTGGAT
->FBgn0000005_297|1347|F|21|n=1
+>FBgn0000005_297|coord=1334|strand -|size=23|nreads=1
+TTTTGCGCAATGGTAATTAAGGA
+>FBgn0000005_297|coord=1347|strand +|size=21|nreads=1
 TTGCACAAAATGAGGGAATTT
->FBgn0000005_297|1334|R|23|n=1
-TTTTGCGCAATGGTAATTAAGGA
->FBgn0000007_1731|4545|R|20|n=1
+>FBgn0000007_1731|coord=4545|strand -|size=20|nreads=1
 TTGAGAGCAAAGGCCGAATG
->FBgn0000007_1731|4555|F|24|n=1
+>FBgn0000007_1731|coord=4555|strand +|size=24|nreads=1
 TTGCTCTCAATGCGCTGAGTTTGG
->FBgn0000155_roo|2682|R|20|n=2
+>FBgn0000155_roo|coord=2682|strand -|size=20|nreads=2
 TTTTTACCAAACGGATGCCT
->FBgn0000155_roo|2692|F|24|n=1
+>FBgn0000155_roo|coord=2692|strand +|size=24|nreads=1
 TTGGTAAAAAATGTATAAGTGAGC
->FBgn0000155_roo|2692|F|27|n=1
+>FBgn0000155_roo|coord=2692|strand +|size=27|nreads=1
 TTGGTAAAAAATGTATAAGTGAGCAGC
->FBgn0000155_roo|3241|F|20|n=1
-TTGGGCAAAAAACTGATTTC
->FBgn0000155_roo|3225|R|26|n=1
+>FBgn0000155_roo|coord=3225|strand -|size=26|nreads=1
 TTTTGCCCAAGGAGACCGTCTATTTT
->FBgn0000155_roo|3226|R|25|n=1
+>FBgn0000155_roo|coord=3226|strand -|size=25|nreads=1
 TTTTGCCCAAGGAGACCGTCTATTT
->FBgn0000155_roo|3227|R|24|n=2
+>FBgn0000155_roo|coord=3227|strand -|size=24|nreads=2
 TTTTGCCCAAGGAGACCGTCTATT
->FBgn0000155_roo|3228|R|23|n=1
+>FBgn0000155_roo|coord=3228|strand -|size=23|nreads=1
 TTTTGCCCAAGGAGACCGTCTAT
->FBgn0000155_roo|3229|R|22|n=2
+>FBgn0000155_roo|coord=3229|strand -|size=22|nreads=2
 TTTTGCCCAAGGAGACCGTCTA
->FBgn0000155_roo|3241|F|24|n=1
+>FBgn0000155_roo|coord=3230|strand -|size=21|nreads=1
+TTTTGCCCAAGGAGACCGTCT
+>FBgn0000155_roo|coord=3231|strand -|size=20|nreads=2
+TTTTGCCCAAGGAGACCGTC
+>FBgn0000155_roo|coord=3241|strand +|size=20|nreads=1
+TTGGGCAAAAAACTGATTTC
+>FBgn0000155_roo|coord=3241|strand +|size=24|nreads=1
 TTGGGCAAAAAACTGATTTCGGGT
->FBgn0000155_roo|3241|F|27|n=1
+>FBgn0000155_roo|coord=3241|strand +|size=27|nreads=1
 TTGGGCAAAAAACTGATTTCGGGTGGA
->FBgn0000155_roo|3241|F|28|n=1
+>FBgn0000155_roo|coord=3241|strand +|size=28|nreads=1
 TTGGGCAAAAAACTGATTTCGGGTGGAT
->FBgn0000155_roo|8644|R|21|n=1
+>FBgn0000155_roo|coord=8644|strand -|size=21|nreads=1
 TTCTGCCAAAGGGCCAGCAAG
->FBgn0000155_roo|8655|F|25|n=1
+>FBgn0000155_roo|coord=8645|strand -|size=20|nreads=1
+TTCTGCCAAAGGGCCAGCAA
+>FBgn0000155_roo|coord=8655|strand +|size=25|nreads=1
 TTTGGCAGAATGTTCACACATGAAA
->FBgn0000349_copia|658|R|22|n=1
+>FBgn0000349_copia|coord=658|strand -|size=22|nreads=1
 TTCTCAAGAATCTGACGCGCCG
->FBgn0000349_copia|670|F|25|n=1
+>FBgn0000349_copia|coord=670|strand +|size=25|nreads=1
 TTCTTGAGAATTTGGACGCCGTTTA
->FBgn0000349_copia|4628|F|20|n=1
+>FBgn0000349_copia|coord=4614|strand -|size=24|nreads=1
+TTGCAGCAAACCCAATTTGTCTCG
+>FBgn0000349_copia|coord=4628|strand +|size=20|nreads=1
 TTTGCTGCAAGACGACCAAT
->FBgn0000349_copia|4614|R|24|n=1
-TTGCAGCAAACCCAATTTGTCTCG
->FBgn0000652_F-element|1564|F|20|n=2
-TTTTCTCGAAAGCAGCAAGT
->FBgn0000652_F-element|1546|R|28|n=1
+>FBgn0000652_F-element|coord=1546|strand -|size=28|nreads=1
 TTCGAGAAAATTACTTCAGGATTTGTCT
->FBgn0000652_F-element|1546|R|28|n=1
+>FBgn0000652_F-element|coord=1546|strand -|size=28|nreads=1
 TTCGGGAAAATTACTTCAGGATTTGTCT
->FBgn0000652_F-element|1547|R|27|n=74
+>FBgn0000652_F-element|coord=1547|strand -|size=27|nreads=1
+TTCGGGAAAATTACTTCAGGATTTGTC
+>FBgn0000652_F-element|coord=1547|strand -|size=27|nreads=1
+TTTGAGAAAATTACTTCAGGATTTGTC
+>FBgn0000652_F-element|coord=1547|strand -|size=27|nreads=74
 TTCGAGAAAATTACTTCAGGATTTGTC
->FBgn0000652_F-element|1547|R|27|n=1
-TTCGGGAAAATTACTTCAGGATTTGTC
->FBgn0000652_F-element|1547|R|27|n=1
-TTTGAGAAAATTACTTCAGGATTTGTC
->FBgn0000652_F-element|1548|R|26|n=3
+>FBgn0000652_F-element|coord=1548|strand -|size=26|nreads=3
 TTCGAGAAAATTACTTCAGGATTTGT
->FBgn0000652_F-element|1549|R|25|n=22
+>FBgn0000652_F-element|coord=1549|strand -|size=25|nreads=1
+TTCGGGAAAATTACTTCAGGATTTG
+>FBgn0000652_F-element|coord=1549|strand -|size=25|nreads=22
 TTCGAGAAAATTACTTCAGGATTTG
->FBgn0000652_F-element|1549|R|25|n=1
-TTCGGGAAAATTACTTCAGGATTTG
->FBgn0000652_F-element|1550|R|24|n=2
+>FBgn0000652_F-element|coord=1550|strand -|size=24|nreads=2
 TTCGAGAAAATTACTTCAGGATTT
->FBgn0000652_F-element|1551|R|23|n=7
+>FBgn0000652_F-element|coord=1551|strand -|size=23|nreads=7
 TTCGAGAAAATTACTTCAGGATT
->FBgn0000652_F-element|1554|R|20|n=1
+>FBgn0000652_F-element|coord=1554|strand -|size=20|nreads=1
 TTCGAGAAAATTACTTCAGG
->FBgn0000652_F-element|1564|F|23|n=2
+>FBgn0000652_F-element|coord=1564|strand +|size=20|nreads=1
+TTTTCTCGAAAGCAGCTAGT
+>FBgn0000652_F-element|coord=1564|strand +|size=20|nreads=2
+TTTTCTCGAAAGCAGCAAGT
+>FBgn0000652_F-element|coord=1564|strand +|size=23|nreads=2
 TTTTCTCGAAAGCAGCAAGTTTC
->FBgn0000652_F-element|1564|F|24|n=2
+>FBgn0000652_F-element|coord=1564|strand +|size=23|nreads=2
+TTTTCTCGAAAGCAGCTAGTTTC
+>FBgn0000652_F-element|coord=1564|strand +|size=24|nreads=2
 TTTTCTCGAAAGCAGCAAGTTTCG
->FBgn0000652_F-element|1564|F|23|n=2
-TTTTCTCGAAAGCAGCTAGTTTC
->FBgn0000652_F-element|1564|F|24|n=5
+>FBgn0000652_F-element|coord=1564|strand +|size=24|nreads=5
 TTTTCTCGAAAGCAGCTAGTTTCG
->FBgn0000652_F-element|1564|F|25|n=1
+>FBgn0000652_F-element|coord=1564|strand +|size=25|nreads=1
 TTTTCTCGAAAGCAGCTAGTTTCGC
->FBgn0000652_F-element|2248|F|20|n=1
-TTTCTTCCAAGCACTAGGGC
->FBgn0000652_F-element|2231|R|27|n=1
+>FBgn0000652_F-element|coord=2231|strand -|size=27|nreads=1
 TTGGAAGAAATCCAGGAATTGAGCTTC
->FBgn0000652_F-element|2233|R|25|n=5
+>FBgn0000652_F-element|coord=2233|strand -|size=25|nreads=5
 TTGGAAGAAATCCAGGAATTGAGCT
->FBgn0000652_F-element|2471|R|21|n=2
+>FBgn0000652_F-element|coord=2248|strand +|size=20|nreads=1
+TTTCTTCCAAGCACTAGGGC
+>FBgn0000652_F-element|coord=2248|strand +|size=21|nreads=1
+TTTCTTCCAAGCACTAGGGCC
+>FBgn0000652_F-element|coord=2471|strand -|size=21|nreads=2
 TTTAACCAAACTGCGGGAAAT
->FBgn0000652_F-element|2482|F|23|n=2
+>FBgn0000652_F-element|coord=2472|strand -|size=20|nreads=1
+TTTAACCAAACTGCGGGAAA
+>FBgn0000652_F-element|coord=2482|strand +|size=23|nreads=2
 TTTGGTTAAAGCTGAATGTCTGC
->FBgn0000652_F-element|2482|F|24|n=2
+>FBgn0000652_F-element|coord=2482|strand +|size=24|nreads=2
 TTTGGTTAAAGCTGAATGTCTGCC
->FBgn0000652_F-element|2482|F|26|n=3
+>FBgn0000652_F-element|coord=2482|strand +|size=26|nreads=3
 TTTGGTTAAAGCTGAATGTCTGCCGG
->FBgn0000652_F-element|2482|F|27|n=1
+>FBgn0000652_F-element|coord=2482|strand +|size=27|nreads=1
 TTTGGTTAAAGCTGAATGTCTGCCGGA
->FBgn0000652_F-element|3524|F|21|n=2
-TTTCGCGAAAGCCACGGAACC
->FBgn0000652_F-element|3507|R|27|n=1
+>FBgn0000652_F-element|coord=3507|strand -|size=27|nreads=1
 TTTCGCGAAATCCAAATTGGTGGGCTG
->FBgn0000652_F-element|3509|R|25|n=6
+>FBgn0000652_F-element|coord=3509|strand -|size=25|nreads=6
 TTTCGCGAAATCCAAATTGGTGGGC
->FBgn0000652_F-element|3510|R|24|n=1
+>FBgn0000652_F-element|coord=3510|strand -|size=24|nreads=1
 TTTCGCGAAATCCAAATTGGTGGG
->FBgn0000652_F-element|3513|R|21|n=3
+>FBgn0000652_F-element|coord=3513|strand -|size=21|nreads=3
 TTTCGCGAAATCCAAATTGGT
->FBgn0000652_F-element|3524|F|23|n=1
+>FBgn0000652_F-element|coord=3524|strand +|size=20|nreads=2
+TTTCGCGAAAGCCATGGAAC
+>FBgn0000652_F-element|coord=3524|strand +|size=21|nreads=2
+TTTCGCGAAAGCCACGGAACC
+>FBgn0000652_F-element|coord=3524|strand +|size=22|nreads=1
+TTTCGCGAAAGCCACGGAACCA
+>FBgn0000652_F-element|coord=3524|strand +|size=23|nreads=1
 TTTCGCGAAAGCCACGGAACCAT
->FBgn0000652_F-element|3524|F|27|n=1
-TTTCGCGAAAGCCACGGAACCATTGAA
->FBgn0000652_F-element|3524|F|24|n=1
+>FBgn0000652_F-element|coord=3524|strand +|size=24|nreads=1
 TTTCGCGAAAGCCATGGAACCATT
->FBgn0000652_F-element|3524|F|26|n=1
+>FBgn0000652_F-element|coord=3524|strand +|size=26|nreads=1
 TTTCGCGAAAGCCATGGAACCATTGA
->FBgn0002697_mdg1|4301|R|22|n=1
+>FBgn0000652_F-element|coord=3524|strand +|size=27|nreads=1
+TTTCGCGAAAGCCACGGAACCATTGAA
+>FBgn0002697_mdg1|coord=4301|strand -|size=22|nreads=1
 TTCTTTGGAAAGAATTTGGGGC
->FBgn0002697_mdg1|4313|F|25|n=1
+>FBgn0002697_mdg1|coord=4302|strand -|size=21|nreads=1
+TTCTTTGGAAAGAATTTGGGG
+>FBgn0002697_mdg1|coord=4303|strand -|size=20|nreads=1
+TTCTTTGGAAAGAATTTGGG
+>FBgn0002697_mdg1|coord=4313|strand +|size=25|nreads=1
 TTCCAAAGAATGATGACCCTTGCAT
->FBgn0003007_opus|5558|F|21|n=1
-TTCCTAGAAATTTATCGTTGC
->FBgn0003007_opus|5540|R|28|n=1
+>FBgn0003007_opus|coord=5540|strand -|size=28|nreads=1
 TTTCTAGGAACGTAGAATGGAATCTCTC
->FBgn0003007_opus|5540|R|28|n=1
+>FBgn0003007_opus|coord=5540|strand -|size=28|nreads=1
 TTTCTAGGAACGTAGAGTGGAATCTCTC
->FBgn0003007_opus|5542|R|26|n=1
+>FBgn0003007_opus|coord=5542|strand -|size=26|nreads=1
 TTTCTAGGAACGTAGAATGGAATCTC
->FBgn0003007_opus|5542|R|26|n=2
+>FBgn0003007_opus|coord=5542|strand -|size=26|nreads=2
 TTTCTAGGAACGTAGAGTGGAATCTC
->FBgn0003007_opus|5543|R|25|n=1
+>FBgn0003007_opus|coord=5543|strand -|size=25|nreads=1
 TTTCTAGGAACGTAGAGTGGAATCT
->FBgn0003007_opus|5544|R|24|n=7
+>FBgn0003007_opus|coord=5544|strand -|size=24|nreads=7
 TTTCTAGGAACGTAGAGTGGAATC
->FBgn0003122_pogo|1819|F|22|n=1
-TTCTATGGAAGACAAGCTGTTT
->FBgn0003122_pogo|1804|R|25|n=1
+>FBgn0003007_opus|coord=5558|strand +|size=21|nreads=1
+TTCCTAGAAATTTATCGTTGC
+>FBgn0003122_pogo|coord=1804|strand -|size=25|nreads=1
 TTCCATAGAATTCAAGTTTTGCAAA
->FBgn0003122_pogo|1806|R|23|n=1
+>FBgn0003122_pogo|coord=1806|strand -|size=23|nreads=1
 TTCCATAGAATTCAAGTTTTGCA
->FBgn0003908_R1A1-element|4690|F|22|n=1
-TTGGCGAAAACTAGATCTTCGA
->FBgn0003908_R1A1-element|4671|R|29|n=1
+>FBgn0003122_pogo|coord=1819|strand +|size=22|nreads=1
+TTCTATGGAAGACAAGCTGTTT
+>FBgn0003908_R1A1-element|coord=4671|strand -|size=29|nreads=1
 TTTTCGCCAAGGCGCTGCACTCCAAGTCC
->FBgn0003908_R1A1-element|4672|R|28|n=8
+>FBgn0003908_R1A1-element|coord=4672|strand -|size=28|nreads=8
 TTTTCGCCAAGGCGCTGCACTCCAAGTC
->FBgn0003908_R1A1-element|4673|R|27|n=1
+>FBgn0003908_R1A1-element|coord=4673|strand -|size=27|nreads=1
 TTTTCGCCAAGGCGCTGCACCCCAAGT
->FBgn0003908_R1A1-element|4673|R|27|n=4
+>FBgn0003908_R1A1-element|coord=4673|strand -|size=27|nreads=4
 TTTTCGCCAAGGCGCTGCACTCCAAGT
->FBgn0003908_R1A1-element|4674|R|26|n=1
+>FBgn0003908_R1A1-element|coord=4674|strand -|size=26|nreads=1
 TTTTCGCCAAGGCGCTGCACCCCAAG
->FBgn0003908_R1A1-element|4674|R|26|n=29
+>FBgn0003908_R1A1-element|coord=4674|strand -|size=26|nreads=1
+TTTTCGTCAAGGCGCTGCACTCCAAG
+>FBgn0003908_R1A1-element|coord=4674|strand -|size=26|nreads=2
+TTTTCGCCAAGGCGCTGCACTTCAAG
+>FBgn0003908_R1A1-element|coord=4674|strand -|size=26|nreads=29
 TTTTCGCCAAGGCGCTGCACTCCAAG
->FBgn0003908_R1A1-element|4674|R|26|n=2
-TTTTCGCCAAGGCGCTGCACTTCAAG
->FBgn0003908_R1A1-element|4674|R|26|n=1
-TTTTCGTCAAGGCGCTGCACTCCAAG
->FBgn0003908_R1A1-element|4675|R|25|n=1
+>FBgn0003908_R1A1-element|coord=4675|strand -|size=25|nreads=1
 TTTTCGCCAAGGCGCTGCACCCCAA
->FBgn0003908_R1A1-element|4675|R|25|n=10
+>FBgn0003908_R1A1-element|coord=4675|strand -|size=25|nreads=1
+TTTTCGCCAAGGCGCTGCACTTCAA
+>FBgn0003908_R1A1-element|coord=4675|strand -|size=25|nreads=10
 TTTTCGCCAAGGCGCTGCACTCCAA
->FBgn0003908_R1A1-element|4675|R|25|n=1
-TTTTCGCCAAGGCGCTGCACTTCAA
->FBgn0003908_R1A1-element|4676|R|24|n=21
+>FBgn0003908_R1A1-element|coord=4676|strand -|size=24|nreads=2
+TTTTCGCCAAGGCGCTGCACTTCA
+>FBgn0003908_R1A1-element|coord=4676|strand -|size=24|nreads=21
 TTTTCGCCAAGGCGCTGCACTCCA
->FBgn0003908_R1A1-element|4676|R|24|n=2
-TTTTCGCCAAGGCGCTGCACTTCA
->FBgn0003908_R1A1-element|4677|R|23|n=12
+>FBgn0003908_R1A1-element|coord=4677|strand -|size=23|nreads=12
 TTTTCGCCAAGGCGCTGCACTCC
->FBgn0003908_R1A1-element|4678|R|22|n=18
+>FBgn0003908_R1A1-element|coord=4678|strand -|size=22|nreads=1
+TTTTCGCCAAGGCGCTGCACTT
+>FBgn0003908_R1A1-element|coord=4678|strand -|size=22|nreads=18
 TTTTCGCCAAGGCGCTGCACTC
->FBgn0003908_R1A1-element|4690|F|23|n=8
+>FBgn0003908_R1A1-element|coord=4679|strand -|size=21|nreads=1
+TTTTCGCCAAGGCGCTGCACC
+>FBgn0003908_R1A1-element|coord=4679|strand -|size=21|nreads=6
+TTTTCGCCAAGGCGCTGCACT
+>FBgn0003908_R1A1-element|coord=4680|strand -|size=20|nreads=4
+TTTTCGCCAAGGCGCTGCAC
+>FBgn0003908_R1A1-element|coord=4690|strand +|size=20|nreads=2
+TTGGCGAAAACTGGATCTTC
+>FBgn0003908_R1A1-element|coord=4690|strand +|size=21|nreads=6
+TTGGCGAAAACTGGATCTTCG
+>FBgn0003908_R1A1-element|coord=4690|strand +|size=22|nreads=1
+TTGGCGAAAACTAGATCTTCGA
+>FBgn0003908_R1A1-element|coord=4690|strand +|size=22|nreads=8
+TTGGCGAAAACTGGATCTTCGA
+>FBgn0003908_R1A1-element|coord=4690|strand +|size=23|nreads=8
 TTGGCGAAAACTGGATCTTCGAG
->FBgn0003908_R1A1-element|4690|F|24|n=9
+>FBgn0003908_R1A1-element|coord=4690|strand +|size=24|nreads=7
+TTGGCGAAAACTGGATCTTCGAGG
+>FBgn0003908_R1A1-element|coord=4690|strand +|size=24|nreads=9
 TTGGCGAAAACTGGATCTTCGAGA
->FBgn0003908_R1A1-element|4690|F|25|n=11
+>FBgn0003908_R1A1-element|coord=4690|strand +|size=25|nreads=11
 TTGGCGAAAACTGGATCTTCGAGAG
->FBgn0003908_R1A1-element|4690|F|26|n=6
+>FBgn0003908_R1A1-element|coord=4690|strand +|size=25|nreads=12
+TTGGCGAAAACTGGATCTTCGAGGG
+>FBgn0003908_R1A1-element|coord=4690|strand +|size=26|nreads=2
+TTGGCGAAAACTGGATCTTCGAGGGA
+>FBgn0003908_R1A1-element|coord=4690|strand +|size=26|nreads=6
 TTGGCGAAAACTGGATCTTCGAGAGA
->FBgn0003908_R1A1-element|4690|F|27|n=20
+>FBgn0003908_R1A1-element|coord=4690|strand +|size=27|nreads=20
 TTGGCGAAAACTGGATCTTCGAGAGAA
->FBgn0003908_R1A1-element|4690|F|28|n=4
+>FBgn0003908_R1A1-element|coord=4690|strand +|size=27|nreads=9
+TTGGCGAAAACTGGATCTTCGAGGGAA
+>FBgn0003908_R1A1-element|coord=4690|strand +|size=28|nreads=1
+TTGGCGAAAACTGGATCTTCGAGGGAAT
+>FBgn0003908_R1A1-element|coord=4690|strand +|size=28|nreads=4
 TTGGCGAAAACTGGATCTTCGAGAGAAT
->FBgn0003908_R1A1-element|4690|F|24|n=7
-TTGGCGAAAACTGGATCTTCGAGG
->FBgn0003908_R1A1-element|4690|F|25|n=12
-TTGGCGAAAACTGGATCTTCGAGGG
->FBgn0003908_R1A1-element|4690|F|26|n=2
-TTGGCGAAAACTGGATCTTCGAGGGA
->FBgn0003908_R1A1-element|4690|F|27|n=9
-TTGGCGAAAACTGGATCTTCGAGGGAA
->FBgn0003908_R1A1-element|4690|F|28|n=1
-TTGGCGAAAACTGGATCTTCGAGGGAAT
->FBgn0005673_1360|773|R|22|n=1
+>FBgn0005673_1360|coord=773|strand -|size=22|nreads=1
 TTTTCGCAATCATTCCATCCTG
->FBgn0005673_1360|785|F|26|n=6
+>FBgn0005673_1360|coord=785|strand +|size=26|nreads=6
 TTTGCGAAAAATTGTTTGCTCAGAGC
->FBgn0005673_1360|3197|R|22|n=1
+>FBgn0005673_1360|coord=3197|strand -|size=22|nreads=1
 TTTGCTAGAAGACGATTTTCGG
->FBgn0005673_1360|3209|F|23|n=1
+>FBgn0005673_1360|coord=3209|strand +|size=23|nreads=1
 TTCTAGCACAACACGCACACATA
->FBgn0005673_1360|3209|F|26|n=1
+>FBgn0005673_1360|coord=3209|strand +|size=26|nreads=1
 TTCTAGCACAACACGCACACATATAC
->FBgn0005673_1360|3209|F|27|n=1
+>FBgn0005673_1360|coord=3209|strand +|size=27|nreads=1
 TTCTAGCACAACACGCACACATATACG
->FBgn0010302_Burdock|3390|R|21|n=1
+>FBgn0010302_Burdock|coord=3390|strand -|size=21|nreads=1
 TTTCATCGAAAGAAATTGGTA
->FBgn0010302_Burdock|3401|F|25|n=2
+>FBgn0010302_Burdock|coord=3401|strand +|size=25|nreads=2
 TTCGATGAAAGACAATGTTCTGCTT
->FBgn0014947_flea|818|F|22|n=1
-TTCTAGAGAACGAAAGCGAGGA
->FBgn0014947_flea|801|R|27|n=4
+>FBgn0014947_flea|coord=801|strand -|size=27|nreads=4
 TTCTCTAGAATTGCTTGTATTTGGTCG
->FBgn0014947_flea|802|R|26|n=11
+>FBgn0014947_flea|coord=802|strand -|size=26|nreads=11
 TTCTCTAGAATTGCTTGTATTTGGTC
->FBgn0014947_flea|803|R|25|n=12
+>FBgn0014947_flea|coord=803|strand -|size=25|nreads=12
 TTCTCTAGAATTGCTTGTATTTGGT
->FBgn0014947_flea|804|R|24|n=2
+>FBgn0014947_flea|coord=804|strand -|size=24|nreads=2
 TTCTCTAGAATTGCTTGTATTTGG
->FBgn0014947_flea|805|R|23|n=1
+>FBgn0014947_flea|coord=805|strand -|size=23|nreads=1
 TTCTCTAGAATTGCTTGTATTTG
->FBgn0014947_flea|1182|F|22|n=1
-TTTCTTAGAATCTGAATGTGTC
->FBgn0014947_flea|1164|R|28|n=2
+>FBgn0014947_flea|coord=818|strand +|size=22|nreads=1
+TTCTAGAGAACGAAAGCGAGGA
+>FBgn0014947_flea|coord=1164|strand -|size=28|nreads=2
 TTCTAAGAAAAGTTCTGCTGATCCAATC
->FBgn0014947_flea|1166|R|26|n=2
+>FBgn0014947_flea|coord=1166|strand -|size=26|nreads=2
 TTCTAAGAAAAGTTCTGCTGATCCAA
->FBgn0014947_flea|1167|R|25|n=1
+>FBgn0014947_flea|coord=1167|strand -|size=25|nreads=1
 TTCTAAGAAAAGTTCTGCTGATCCA
->FBgn0014947_flea|1168|R|24|n=1
+>FBgn0014947_flea|coord=1168|strand -|size=24|nreads=1
 TTCTAAGAAAAGTTCTGCTGATCC
->FBgn0014947_flea|1169|R|23|n=1
+>FBgn0014947_flea|coord=1169|strand -|size=23|nreads=1
 TTCTAAGAAAAGTTCTGCTGATC
->FBgn0014947_flea|2754|R|21|n=1
+>FBgn0014947_flea|coord=1182|strand +|size=22|nreads=1
+TTTCTTAGAATCTGAATGTGTC
+>FBgn0014947_flea|coord=2754|strand -|size=21|nreads=1
 TTTAGACCAAATTCTGCAGCT
->FBgn0014947_flea|2765|F|24|n=4
+>FBgn0014947_flea|coord=2765|strand +|size=24|nreads=4
 TTGGTCTAAAAATAAAATGGAAGA
->FBgn0014947_flea|2765|F|25|n=1
+>FBgn0014947_flea|coord=2765|strand +|size=25|nreads=1
 TTGGTCTAAAAATAAAATGGAAGAA
->FBgn0014947_flea|2765|F|26|n=1
+>FBgn0014947_flea|coord=2765|strand +|size=26|nreads=1
 TTGGTCTAAAAATAAAATGGAAGAAG
->FBgn0014947_flea|2765|F|28|n=1
+>FBgn0014947_flea|coord=2765|strand +|size=28|nreads=1
 TTGGTCTAAAAATAAAATGGAAGAAGTG
->FBgn0015945_GATE|3158|F|20|n=3
-TTCGTTCCAAATGAGCAAGC
->FBgn0015945_GATE|3140|R|28|n=9
+>FBgn0015945_GATE|coord=3140|strand -|size=28|nreads=9
 TTGGAACGAAATTGGCCTGATTAGCGGA
->FBgn0015945_GATE|3141|R|27|n=4
+>FBgn0015945_GATE|coord=3141|strand -|size=27|nreads=4
 TTGGAACGAAATTGGCCTGATTAGCGG
->FBgn0015945_GATE|3142|R|26|n=17
+>FBgn0015945_GATE|coord=3142|strand -|size=26|nreads=17
 TTGGAACGAAATTGGCCTGATTAGCG
->FBgn0015945_GATE|3143|R|25|n=86
+>FBgn0015945_GATE|coord=3143|strand -|size=25|nreads=86
 TTGGAACGAAATTGGCCTGATTAGC
->FBgn0015945_GATE|3144|R|24|n=17
+>FBgn0015945_GATE|coord=3144|strand -|size=24|nreads=17
 TTGGAACGAAATTGGCCTGATTAG
->FBgn0015945_GATE|6234|R|22|n=1
+>FBgn0015945_GATE|coord=3158|strand +|size=20|nreads=3
+TTCGTTCCAAATGAGCAAGC
+>FBgn0015945_GATE|coord=3158|strand +|size=21|nreads=1
+TTCGTTCCAAATGAGCAAGCC
+>FBgn0015945_GATE|coord=3158|strand +|size=22|nreads=2
+TTCGTTCCAAATGAGCAAGCCG
+>FBgn0015945_GATE|coord=6234|strand -|size=22|nreads=1
 TTGAAGGAAATCGCGGGAAAGC
->FBgn0015945_GATE|6246|F|25|n=1
+>FBgn0015945_GATE|coord=6246|strand +|size=25|nreads=1
 TTTCCTTCAAGCCGTAAAAGAGTCG
->FBgn0015945_GATE|6246|F|26|n=1
+>FBgn0015945_GATE|coord=6246|strand +|size=26|nreads=1
 TTTCCTTCAAGCCGTAAAAGAGTCGG
->FBgn0042682_Rt1b|1075|R|21|n=1
+>FBgn0042682_Rt1b|coord=1075|strand -|size=21|nreads=1
 TTCTTGGCGACAGATGCGTAG
->FBgn0042682_Rt1b|1086|F|23|n=1
+>FBgn0042682_Rt1b|coord=1076|strand -|size=20|nreads=1
+TTCTTGGCGACAGATGCGTA
+>FBgn0042682_Rt1b|coord=1086|strand +|size=23|nreads=1
 TTGCCAAGAATGCTAGCACGGGT
->FBgn0042682_Rt1b|2920|F|22|n=1
-TTGTTACCAAAAAGCTAAGGAG
->FBgn0042682_Rt1b|2902|R|28|n=1
+>FBgn0042682_Rt1b|coord=2902|strand -|size=28|nreads=1
 TTGGTAACAAGCTTGTAGGCGAGGCCCC
->FBgn0042682_Rt1b|2903|R|27|n=1
+>FBgn0042682_Rt1b|coord=2903|strand -|size=27|nreads=1
 TTGGTAACAAGCTTGTAGGCGAGGCCC
->FBgn0042682_Rt1b|2904|R|26|n=2
-TTGGTAACAAGCTTGTAGGCGAGGCC
->FBgn0042682_Rt1b|2904|R|26|n=1
+>FBgn0042682_Rt1b|coord=2904|strand -|size=26|nreads=1
 TTGGTAACAAGCTTGTAGGCGAGTCC
->FBgn0042682_Rt1b|2905|R|25|n=2
-TTGGTAACAAGCTTGTAGGCGAGGC
->FBgn0042682_Rt1b|2905|R|25|n=1
+>FBgn0042682_Rt1b|coord=2904|strand -|size=26|nreads=2
+TTGGTAACAAGCTTGTAGGCGAGGCC
+>FBgn0042682_Rt1b|coord=2905|strand -|size=25|nreads=1
 TTGGTAACAAGCTTGTAGGCGAGGT
->FBgn0042682_Rt1b|2906|R|24|n=25
+>FBgn0042682_Rt1b|coord=2905|strand -|size=25|nreads=2
+TTGGTAACAAGCTTGTAGGCGAGGC
+>FBgn0042682_Rt1b|coord=2906|strand -|size=24|nreads=25
 TTGGTAACAAGCTTGTAGGCGAGG
->FBgn0042682_Rt1b|2907|R|23|n=1
+>FBgn0042682_Rt1b|coord=2907|strand -|size=23|nreads=1
 TTGGTAACAAGCTTGGAGGCGAG
->FBgn0042682_Rt1b|2907|R|23|n=15
+>FBgn0042682_Rt1b|coord=2907|strand -|size=23|nreads=15
 TTGGTAACAAGCTTGTAGGCGAG
->FBgn0042682_Rt1b|2908|R|22|n=1
+>FBgn0042682_Rt1b|coord=2908|strand -|size=22|nreads=1
 TTGGTAACAAGCTTGTAGGCGA
->FBgn0042682_Rt1b|2920|F|23|n=1
+>FBgn0042682_Rt1b|coord=2909|strand -|size=21|nreads=6
+TTGGTAACAAGCTTGTAGGCG
+>FBgn0042682_Rt1b|coord=2920|strand +|size=22|nreads=1
+TTGTTACCAAAAAGCTAAGGAG
+>FBgn0042682_Rt1b|coord=2920|strand +|size=23|nreads=1
 TTGTTACCAAAAAGCTAAGGAGG
->FBgn0042682_Rt1b|2920|F|25|n=1
-TTGTTACCAAAAAGCTAAGGAGGAG
->FBgn0042682_Rt1b|2920|F|26|n=1
-TTGTTACCAAAAAGCTAAGGAGGAGA
->FBgn0042682_Rt1b|2920|F|27|n=1
-TTGTTACCAAAAAGCTAAGGAGGAGAG
->FBgn0042682_Rt1b|2920|F|23|n=1
+>FBgn0042682_Rt1b|coord=2920|strand +|size=23|nreads=1
 TTGTTACCAACAAGCTAAGGAGG
->FBgn0042682_Rt1b|2920|F|24|n=2
+>FBgn0042682_Rt1b|coord=2920|strand +|size=24|nreads=2
 TTGTTACCAACAAGCTAAGGAGGA
->FBgn0042682_Rt1b|4364|R|22|n=1
+>FBgn0042682_Rt1b|coord=2920|strand +|size=25|nreads=1
+TTGTTACCAAAAAGCTAAGGAGGAG
+>FBgn0042682_Rt1b|coord=2920|strand +|size=26|nreads=1
+TTGTTACCAAAAAGCTAAGGAGGAGA
+>FBgn0042682_Rt1b|coord=2920|strand +|size=27|nreads=1
+TTGTTACCAAAAAGCTAAGGAGGAGAG
+>FBgn0042682_Rt1b|coord=4364|strand -|size=22|nreads=1
 TTGCCTGGAAGCGCCACTCCGC
->FBgn0042682_Rt1b|4376|F|24|n=1
+>FBgn0042682_Rt1b|coord=4365|strand -|size=21|nreads=1
+TTGCCTGGAAGCGCCACTCCG
+>FBgn0042682_Rt1b|coord=4366|strand -|size=20|nreads=4
+TTGCCTGGAAGCGCCACTCC
+>FBgn0042682_Rt1b|coord=4376|strand +|size=24|nreads=1
 TTCCAGGCAAGAGGCACACGAGTG
->FBgn0042682_Rt1b|4376|F|26|n=1
+>FBgn0042682_Rt1b|coord=4376|strand +|size=26|nreads=1
 TTCCAGGCAAGAGGCACACGAGTGGC
->FBgn0062343_Dm88|4210|R|21|n=1
+>FBgn0062343_Dm88|coord=4210|strand -|size=21|nreads=1
 TTGGTTAGAACATCTGCCATC
->FBgn0062343_Dm88|4221|F|24|n=1
+>FBgn0062343_Dm88|coord=4221|strand +|size=24|nreads=1
 TTCTAACCAAGAATTTGAATAGAT
->FBgn0063427_invader4|707|F|22|n=2
+>FBgn0063427_invader4|coord=691|strand -|size=26|nreads=15
+TTCCTACGAATCGCTGTATGAACAGT
+>FBgn0063427_invader4|coord=707|strand +|size=22|nreads=2
 TTCGTAGGAATGGAGACGTCGG
->FBgn0063427_invader4|691|R|26|n=15
-TTCCTACGAATCGCTGTATGAACAGT
->FBgn0063428_invader3|440|F|22|n=2
+>FBgn0063428_invader3|coord=425|strand -|size=25|nreads=1
+TTCTGGGGAAATGGCCTGCAGACGC
+>FBgn0063428_invader3|coord=427|strand -|size=23|nreads=1
+TTCTGGGGAAATGGCCTGCAGAC
+>FBgn0063428_invader3|coord=440|strand +|size=22|nreads=2
 TTCCCCAGAAACGCGTGGCGAT
->FBgn0063428_invader3|425|R|25|n=1
-TTCTGGGGAAATGGCCTGCAGACGC
->FBgn0063428_invader3|427|R|23|n=1
-TTCTGGGGAAATGGCCTGCAGAC
->FBgn0063430_invader1|2082|R|20|n=1
+>FBgn0063430_invader1|coord=2082|strand -|size=20|nreads=1
 TTTTATCGAACCAATAGAAC
->FBgn0063430_invader1|2092|F|24|n=1
+>FBgn0063430_invader1|coord=2092|strand +|size=24|nreads=1
 TTCGATAAAATGTCTAAGTATGTT
->FBgn0063430_invader1|2092|F|26|n=1
+>FBgn0063430_invader1|coord=2092|strand +|size=26|nreads=1
 TTCGATAAAATGTCTAAGTATGTTCG
->FBgn0063433_gypsy4|3058|F|22|n=1
+>FBgn0063433_gypsy4|coord=3040|strand -|size=28|nreads=1
+TTTTGAAGAACTTGGATTTTTCTTGAGA
+>FBgn0063433_gypsy4|coord=3044|strand -|size=24|nreads=1
+TTTTGAAGAACTTGGATTTTTCTT
+>FBgn0063433_gypsy4|coord=3058|strand +|size=22|nreads=1
 TTCTTCAAAAAGAGCGTGGAAT
->FBgn0063433_gypsy4|3040|R|28|n=1
-TTTTGAAGAACTTGGATTTTTCTTGAGA
->FBgn0063433_gypsy4|3044|R|24|n=1
-TTTTGAAGAACTTGGATTTTTCTT
->FBgn0063440_baggins|5170|F|21|n=1
+>FBgn0063440_baggins|coord=5154|strand -|size=26|nreads=1
+TTTTGTGCAAATGGCTGTGAAGTCGG
+>FBgn0063440_baggins|coord=5170|strand +|size=21|nreads=1
 TTGCACAAAATTGGCATTGCA
->FBgn0063440_baggins|5154|R|26|n=1
-TTTTGTGCAAATGGCTGTGAAGTCGG
->FBgn0063919_Max-element|3887|R|21|n=2
+>FBgn0063919_Max-element|coord=3887|strand -|size=21|nreads=2
 TTGCTGAGAAGCGTGTTGAGC
->FBgn0063919_Max-element|3898|F|23|n=1
+>FBgn0063919_Max-element|coord=3898|strand +|size=23|nreads=1
 TTCTCAGCAAGTTCTGGGAGGTG
->FBgn0063919_Max-element|3898|F|24|n=2
-TTCTCAGCAAGTTCTGGGAGGTGG
->FBgn0063919_Max-element|3898|F|25|n=1
-TTCTCAGCAAGTTCTGGGAGGTGGA
->FBgn0063919_Max-element|3898|F|24|n=1
+>FBgn0063919_Max-element|coord=3898|strand +|size=24|nreads=1
 TTCTCAGCAAGTTCTGGGAGGTGT
->FBgn0067385_invader6|3024|F|21|n=1
-TTGACTAGAATGACTTAGACT
->FBgn0067385_invader6|3007|R|27|n=4
+>FBgn0063919_Max-element|coord=3898|strand +|size=24|nreads=2
+TTCTCAGCAAGTTCTGGGAGGTGG
+>FBgn0063919_Max-element|coord=3898|strand +|size=25|nreads=1
+TTCTCAGCAAGTTCTGGGAGGTGGA
+>FBgn0067385_invader6|coord=3007|strand -|size=27|nreads=4
 TTCTAGTCAAAGTCGAAGGACTGCATA
->FBgn0067385_invader6|3008|R|26|n=3
+>FBgn0067385_invader6|coord=3008|strand -|size=26|nreads=3
 TTCTAGTCAAAGTCGAAGGACTGCAT
->FBgn0067385_invader6|3009|R|25|n=5
+>FBgn0067385_invader6|coord=3009|strand -|size=25|nreads=5
 TTCTAGTCAAAGTCGAAGGACTGCA
->FBgn0067385_invader6|3010|R|24|n=4
+>FBgn0067385_invader6|coord=3010|strand -|size=24|nreads=4
 TTCTAGTCAAAGTCGAAGGACTGC
->FBgn0067385_invader6|3011|R|23|n=1
+>FBgn0067385_invader6|coord=3011|strand -|size=23|nreads=1
 TTCTAGTCAAAGTCGAAGGACTG
->FBgn0067385_invader6|3014|R|20|n=1
+>FBgn0067385_invader6|coord=3014|strand -|size=20|nreads=1
 TTCTAGTCAAAGTCGAAGGA
->FBgn0067385_invader6|3024|F|26|n=1
+>FBgn0067385_invader6|coord=3024|strand +|size=21|nreads=1
+TTGACTAGAATGACTTAGACT
+>FBgn0067385_invader6|coord=3024|strand +|size=26|nreads=1
 TTGACTAGAATGACTTAGACTTAGAA
->FBgn0067624_BS3|1016|R|20|n=1
+>FBgn0067624_BS3|coord=1016|strand -|size=20|nreads=1
 TTGATGCCAATGTTCCAACG
->FBgn0067624_BS3|1026|F|26|n=1
+>FBgn0067624_BS3|coord=1026|strand +|size=24|nreads=1
+TTGGCATCAATGGTGACAAATCTG
+>FBgn0067624_BS3|coord=1026|strand +|size=25|nreads=1
+TTGGCATCAATGGTGACAAATCTGC
+>FBgn0067624_BS3|coord=1026|strand +|size=26|nreads=1
 TTGGCATCAATGGTGACAAATCAGCG
->FBgn0067624_BS3|1026|F|24|n=1
-TTGGCATCAATGGTGACAAATCTG
->FBgn0067624_BS3|1026|F|25|n=1
-TTGGCATCAATGGTGACAAATCTGC