Mercurial > repos > artbio > small_rna_signatures

view test-data/paired_2.fa @ 3:4d9682bd3a6b draft

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planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/small_rna_signatures commit 96ed5824190aff281cc3aa47dc60fc66aac41db3
author artbio
date Sat, 02 Sep 2017 06:35:15 -0400
parents
children a7fd04208764
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>FBgn0000004_17.6|5844|R|21|n=1
TTTTCGTCAAGTGTGCTAAAT
>FBgn0000004_17.6|5855|F|23|n=1
TTGACGAAAATGATCGAGTGGAT
>FBgn0000005_297|1347|F|21|n=1
TTGCACAAAATGAGGGAATTT
>FBgn0000005_297|1334|R|23|n=1
TTTTGCGCAATGGTAATTAAGGA
>FBgn0000007_1731|4545|R|20|n=1
TTGAGAGCAAAGGCCGAATG
>FBgn0000007_1731|4555|F|24|n=1
TTGCTCTCAATGCGCTGAGTTTGG
>FBgn0000155_roo|2682|R|20|n=2
TTTTTACCAAACGGATGCCT
>FBgn0000155_roo|2692|F|24|n=1
TTGGTAAAAAATGTATAAGTGAGC
>FBgn0000155_roo|2692|F|27|n=1
TTGGTAAAAAATGTATAAGTGAGCAGC
>FBgn0000155_roo|3241|F|20|n=1
TTGGGCAAAAAACTGATTTC
>FBgn0000155_roo|3225|R|26|n=1
TTTTGCCCAAGGAGACCGTCTATTTT
>FBgn0000155_roo|3226|R|25|n=1
TTTTGCCCAAGGAGACCGTCTATTT
>FBgn0000155_roo|3227|R|24|n=2
TTTTGCCCAAGGAGACCGTCTATT
>FBgn0000155_roo|3228|R|23|n=1
TTTTGCCCAAGGAGACCGTCTAT
>FBgn0000155_roo|3229|R|22|n=2
TTTTGCCCAAGGAGACCGTCTA
>FBgn0000155_roo|3241|F|24|n=1
TTGGGCAAAAAACTGATTTCGGGT
>FBgn0000155_roo|3241|F|27|n=1
TTGGGCAAAAAACTGATTTCGGGTGGA
>FBgn0000155_roo|3241|F|28|n=1
TTGGGCAAAAAACTGATTTCGGGTGGAT
>FBgn0000155_roo|8644|R|21|n=1
TTCTGCCAAAGGGCCAGCAAG
>FBgn0000155_roo|8655|F|25|n=1
TTTGGCAGAATGTTCACACATGAAA
>FBgn0000349_copia|658|R|22|n=1
TTCTCAAGAATCTGACGCGCCG
>FBgn0000349_copia|670|F|25|n=1
TTCTTGAGAATTTGGACGCCGTTTA
>FBgn0000349_copia|4628|F|20|n=1
TTTGCTGCAAGACGACCAAT
>FBgn0000349_copia|4614|R|24|n=1
TTGCAGCAAACCCAATTTGTCTCG
>FBgn0000652_F-element|1564|F|20|n=2
TTTTCTCGAAAGCAGCAAGT
>FBgn0000652_F-element|1546|R|28|n=1
TTCGAGAAAATTACTTCAGGATTTGTCT
>FBgn0000652_F-element|1546|R|28|n=1
TTCGGGAAAATTACTTCAGGATTTGTCT
>FBgn0000652_F-element|1547|R|27|n=74
TTCGAGAAAATTACTTCAGGATTTGTC
>FBgn0000652_F-element|1547|R|27|n=1
TTCGGGAAAATTACTTCAGGATTTGTC
>FBgn0000652_F-element|1547|R|27|n=1
TTTGAGAAAATTACTTCAGGATTTGTC
>FBgn0000652_F-element|1548|R|26|n=3
TTCGAGAAAATTACTTCAGGATTTGT
>FBgn0000652_F-element|1549|R|25|n=22
TTCGAGAAAATTACTTCAGGATTTG
>FBgn0000652_F-element|1549|R|25|n=1
TTCGGGAAAATTACTTCAGGATTTG
>FBgn0000652_F-element|1550|R|24|n=2
TTCGAGAAAATTACTTCAGGATTT
>FBgn0000652_F-element|1551|R|23|n=7
TTCGAGAAAATTACTTCAGGATT
>FBgn0000652_F-element|1554|R|20|n=1
TTCGAGAAAATTACTTCAGG
>FBgn0000652_F-element|1564|F|23|n=2
TTTTCTCGAAAGCAGCAAGTTTC
>FBgn0000652_F-element|1564|F|24|n=2
TTTTCTCGAAAGCAGCAAGTTTCG
>FBgn0000652_F-element|1564|F|23|n=2
TTTTCTCGAAAGCAGCTAGTTTC
>FBgn0000652_F-element|1564|F|24|n=5
TTTTCTCGAAAGCAGCTAGTTTCG
>FBgn0000652_F-element|1564|F|25|n=1
TTTTCTCGAAAGCAGCTAGTTTCGC
>FBgn0000652_F-element|2248|F|20|n=1
TTTCTTCCAAGCACTAGGGC
>FBgn0000652_F-element|2231|R|27|n=1
TTGGAAGAAATCCAGGAATTGAGCTTC
>FBgn0000652_F-element|2233|R|25|n=5
TTGGAAGAAATCCAGGAATTGAGCT
>FBgn0000652_F-element|2471|R|21|n=2
TTTAACCAAACTGCGGGAAAT
>FBgn0000652_F-element|2482|F|23|n=2
TTTGGTTAAAGCTGAATGTCTGC
>FBgn0000652_F-element|2482|F|24|n=2
TTTGGTTAAAGCTGAATGTCTGCC
>FBgn0000652_F-element|2482|F|26|n=3
TTTGGTTAAAGCTGAATGTCTGCCGG
>FBgn0000652_F-element|2482|F|27|n=1
TTTGGTTAAAGCTGAATGTCTGCCGGA
>FBgn0000652_F-element|3524|F|21|n=2
TTTCGCGAAAGCCACGGAACC
>FBgn0000652_F-element|3507|R|27|n=1
TTTCGCGAAATCCAAATTGGTGGGCTG
>FBgn0000652_F-element|3509|R|25|n=6
TTTCGCGAAATCCAAATTGGTGGGC
>FBgn0000652_F-element|3510|R|24|n=1
TTTCGCGAAATCCAAATTGGTGGG
>FBgn0000652_F-element|3513|R|21|n=3
TTTCGCGAAATCCAAATTGGT
>FBgn0000652_F-element|3524|F|23|n=1
TTTCGCGAAAGCCACGGAACCAT
>FBgn0000652_F-element|3524|F|27|n=1
TTTCGCGAAAGCCACGGAACCATTGAA
>FBgn0000652_F-element|3524|F|24|n=1
TTTCGCGAAAGCCATGGAACCATT
>FBgn0000652_F-element|3524|F|26|n=1
TTTCGCGAAAGCCATGGAACCATTGA
>FBgn0002697_mdg1|4301|R|22|n=1
TTCTTTGGAAAGAATTTGGGGC
>FBgn0002697_mdg1|4313|F|25|n=1
TTCCAAAGAATGATGACCCTTGCAT
>FBgn0003007_opus|5558|F|21|n=1
TTCCTAGAAATTTATCGTTGC
>FBgn0003007_opus|5540|R|28|n=1
TTTCTAGGAACGTAGAATGGAATCTCTC
>FBgn0003007_opus|5540|R|28|n=1
TTTCTAGGAACGTAGAGTGGAATCTCTC
>FBgn0003007_opus|5542|R|26|n=1
TTTCTAGGAACGTAGAATGGAATCTC
>FBgn0003007_opus|5542|R|26|n=2
TTTCTAGGAACGTAGAGTGGAATCTC
>FBgn0003007_opus|5543|R|25|n=1
TTTCTAGGAACGTAGAGTGGAATCT
>FBgn0003007_opus|5544|R|24|n=7
TTTCTAGGAACGTAGAGTGGAATC
>FBgn0003122_pogo|1819|F|22|n=1
TTCTATGGAAGACAAGCTGTTT
>FBgn0003122_pogo|1804|R|25|n=1
TTCCATAGAATTCAAGTTTTGCAAA
>FBgn0003122_pogo|1806|R|23|n=1
TTCCATAGAATTCAAGTTTTGCA
>FBgn0003908_R1A1-element|4690|F|22|n=1
TTGGCGAAAACTAGATCTTCGA
>FBgn0003908_R1A1-element|4671|R|29|n=1
TTTTCGCCAAGGCGCTGCACTCCAAGTCC
>FBgn0003908_R1A1-element|4672|R|28|n=8
TTTTCGCCAAGGCGCTGCACTCCAAGTC
>FBgn0003908_R1A1-element|4673|R|27|n=1
TTTTCGCCAAGGCGCTGCACCCCAAGT
>FBgn0003908_R1A1-element|4673|R|27|n=4
TTTTCGCCAAGGCGCTGCACTCCAAGT
>FBgn0003908_R1A1-element|4674|R|26|n=1
TTTTCGCCAAGGCGCTGCACCCCAAG
>FBgn0003908_R1A1-element|4674|R|26|n=29
TTTTCGCCAAGGCGCTGCACTCCAAG
>FBgn0003908_R1A1-element|4674|R|26|n=2
TTTTCGCCAAGGCGCTGCACTTCAAG
>FBgn0003908_R1A1-element|4674|R|26|n=1
TTTTCGTCAAGGCGCTGCACTCCAAG
>FBgn0003908_R1A1-element|4675|R|25|n=1
TTTTCGCCAAGGCGCTGCACCCCAA
>FBgn0003908_R1A1-element|4675|R|25|n=10
TTTTCGCCAAGGCGCTGCACTCCAA
>FBgn0003908_R1A1-element|4675|R|25|n=1
TTTTCGCCAAGGCGCTGCACTTCAA
>FBgn0003908_R1A1-element|4676|R|24|n=21
TTTTCGCCAAGGCGCTGCACTCCA
>FBgn0003908_R1A1-element|4676|R|24|n=2
TTTTCGCCAAGGCGCTGCACTTCA
>FBgn0003908_R1A1-element|4677|R|23|n=12
TTTTCGCCAAGGCGCTGCACTCC
>FBgn0003908_R1A1-element|4678|R|22|n=18
TTTTCGCCAAGGCGCTGCACTC
>FBgn0003908_R1A1-element|4690|F|23|n=8
TTGGCGAAAACTGGATCTTCGAG
>FBgn0003908_R1A1-element|4690|F|24|n=9
TTGGCGAAAACTGGATCTTCGAGA
>FBgn0003908_R1A1-element|4690|F|25|n=11
TTGGCGAAAACTGGATCTTCGAGAG
>FBgn0003908_R1A1-element|4690|F|26|n=6
TTGGCGAAAACTGGATCTTCGAGAGA
>FBgn0003908_R1A1-element|4690|F|27|n=20
TTGGCGAAAACTGGATCTTCGAGAGAA
>FBgn0003908_R1A1-element|4690|F|28|n=4
TTGGCGAAAACTGGATCTTCGAGAGAAT
>FBgn0003908_R1A1-element|4690|F|24|n=7
TTGGCGAAAACTGGATCTTCGAGG
>FBgn0003908_R1A1-element|4690|F|25|n=12
TTGGCGAAAACTGGATCTTCGAGGG
>FBgn0003908_R1A1-element|4690|F|26|n=2
TTGGCGAAAACTGGATCTTCGAGGGA
>FBgn0003908_R1A1-element|4690|F|27|n=9
TTGGCGAAAACTGGATCTTCGAGGGAA
>FBgn0003908_R1A1-element|4690|F|28|n=1
TTGGCGAAAACTGGATCTTCGAGGGAAT
>FBgn0005673_1360|773|R|22|n=1
TTTTCGCAATCATTCCATCCTG
>FBgn0005673_1360|785|F|26|n=6
TTTGCGAAAAATTGTTTGCTCAGAGC
>FBgn0005673_1360|3197|R|22|n=1
TTTGCTAGAAGACGATTTTCGG
>FBgn0005673_1360|3209|F|23|n=1
TTCTAGCACAACACGCACACATA
>FBgn0005673_1360|3209|F|26|n=1
TTCTAGCACAACACGCACACATATAC
>FBgn0005673_1360|3209|F|27|n=1
TTCTAGCACAACACGCACACATATACG
>FBgn0010302_Burdock|3390|R|21|n=1
TTTCATCGAAAGAAATTGGTA
>FBgn0010302_Burdock|3401|F|25|n=2
TTCGATGAAAGACAATGTTCTGCTT
>FBgn0014947_flea|818|F|22|n=1
TTCTAGAGAACGAAAGCGAGGA
>FBgn0014947_flea|801|R|27|n=4
TTCTCTAGAATTGCTTGTATTTGGTCG
>FBgn0014947_flea|802|R|26|n=11
TTCTCTAGAATTGCTTGTATTTGGTC
>FBgn0014947_flea|803|R|25|n=12
TTCTCTAGAATTGCTTGTATTTGGT
>FBgn0014947_flea|804|R|24|n=2
TTCTCTAGAATTGCTTGTATTTGG
>FBgn0014947_flea|805|R|23|n=1
TTCTCTAGAATTGCTTGTATTTG
>FBgn0014947_flea|1182|F|22|n=1
TTTCTTAGAATCTGAATGTGTC
>FBgn0014947_flea|1164|R|28|n=2
TTCTAAGAAAAGTTCTGCTGATCCAATC
>FBgn0014947_flea|1166|R|26|n=2
TTCTAAGAAAAGTTCTGCTGATCCAA
>FBgn0014947_flea|1167|R|25|n=1
TTCTAAGAAAAGTTCTGCTGATCCA
>FBgn0014947_flea|1168|R|24|n=1
TTCTAAGAAAAGTTCTGCTGATCC
>FBgn0014947_flea|1169|R|23|n=1
TTCTAAGAAAAGTTCTGCTGATC
>FBgn0014947_flea|2754|R|21|n=1
TTTAGACCAAATTCTGCAGCT
>FBgn0014947_flea|2765|F|24|n=4
TTGGTCTAAAAATAAAATGGAAGA
>FBgn0014947_flea|2765|F|25|n=1
TTGGTCTAAAAATAAAATGGAAGAA
>FBgn0014947_flea|2765|F|26|n=1
TTGGTCTAAAAATAAAATGGAAGAAG
>FBgn0014947_flea|2765|F|28|n=1
TTGGTCTAAAAATAAAATGGAAGAAGTG
>FBgn0015945_GATE|3158|F|20|n=3
TTCGTTCCAAATGAGCAAGC
>FBgn0015945_GATE|3140|R|28|n=9
TTGGAACGAAATTGGCCTGATTAGCGGA
>FBgn0015945_GATE|3141|R|27|n=4
TTGGAACGAAATTGGCCTGATTAGCGG
>FBgn0015945_GATE|3142|R|26|n=17
TTGGAACGAAATTGGCCTGATTAGCG
>FBgn0015945_GATE|3143|R|25|n=86
TTGGAACGAAATTGGCCTGATTAGC
>FBgn0015945_GATE|3144|R|24|n=17
TTGGAACGAAATTGGCCTGATTAG
>FBgn0015945_GATE|6234|R|22|n=1
TTGAAGGAAATCGCGGGAAAGC
>FBgn0015945_GATE|6246|F|25|n=1
TTTCCTTCAAGCCGTAAAAGAGTCG
>FBgn0015945_GATE|6246|F|26|n=1
TTTCCTTCAAGCCGTAAAAGAGTCGG
>FBgn0042682_Rt1b|1075|R|21|n=1
TTCTTGGCGACAGATGCGTAG
>FBgn0042682_Rt1b|1086|F|23|n=1
TTGCCAAGAATGCTAGCACGGGT
>FBgn0042682_Rt1b|2920|F|22|n=1
TTGTTACCAAAAAGCTAAGGAG
>FBgn0042682_Rt1b|2902|R|28|n=1
TTGGTAACAAGCTTGTAGGCGAGGCCCC
>FBgn0042682_Rt1b|2903|R|27|n=1
TTGGTAACAAGCTTGTAGGCGAGGCCC
>FBgn0042682_Rt1b|2904|R|26|n=2
TTGGTAACAAGCTTGTAGGCGAGGCC
>FBgn0042682_Rt1b|2904|R|26|n=1
TTGGTAACAAGCTTGTAGGCGAGTCC
>FBgn0042682_Rt1b|2905|R|25|n=2
TTGGTAACAAGCTTGTAGGCGAGGC
>FBgn0042682_Rt1b|2905|R|25|n=1
TTGGTAACAAGCTTGTAGGCGAGGT
>FBgn0042682_Rt1b|2906|R|24|n=25
TTGGTAACAAGCTTGTAGGCGAGG
>FBgn0042682_Rt1b|2907|R|23|n=1
TTGGTAACAAGCTTGGAGGCGAG
>FBgn0042682_Rt1b|2907|R|23|n=15
TTGGTAACAAGCTTGTAGGCGAG
>FBgn0042682_Rt1b|2908|R|22|n=1
TTGGTAACAAGCTTGTAGGCGA
>FBgn0042682_Rt1b|2920|F|23|n=1
TTGTTACCAAAAAGCTAAGGAGG
>FBgn0042682_Rt1b|2920|F|25|n=1
TTGTTACCAAAAAGCTAAGGAGGAG
>FBgn0042682_Rt1b|2920|F|26|n=1
TTGTTACCAAAAAGCTAAGGAGGAGA
>FBgn0042682_Rt1b|2920|F|27|n=1
TTGTTACCAAAAAGCTAAGGAGGAGAG
>FBgn0042682_Rt1b|2920|F|23|n=1
TTGTTACCAACAAGCTAAGGAGG
>FBgn0042682_Rt1b|2920|F|24|n=2
TTGTTACCAACAAGCTAAGGAGGA
>FBgn0042682_Rt1b|4364|R|22|n=1
TTGCCTGGAAGCGCCACTCCGC
>FBgn0042682_Rt1b|4376|F|24|n=1
TTCCAGGCAAGAGGCACACGAGTG
>FBgn0042682_Rt1b|4376|F|26|n=1
TTCCAGGCAAGAGGCACACGAGTGGC
>FBgn0062343_Dm88|4210|R|21|n=1
TTGGTTAGAACATCTGCCATC
>FBgn0062343_Dm88|4221|F|24|n=1
TTCTAACCAAGAATTTGAATAGAT
>FBgn0063427_invader4|707|F|22|n=2
TTCGTAGGAATGGAGACGTCGG
>FBgn0063427_invader4|691|R|26|n=15
TTCCTACGAATCGCTGTATGAACAGT
>FBgn0063428_invader3|440|F|22|n=2
TTCCCCAGAAACGCGTGGCGAT
>FBgn0063428_invader3|425|R|25|n=1
TTCTGGGGAAATGGCCTGCAGACGC
>FBgn0063428_invader3|427|R|23|n=1
TTCTGGGGAAATGGCCTGCAGAC
>FBgn0063430_invader1|2082|R|20|n=1
TTTTATCGAACCAATAGAAC
>FBgn0063430_invader1|2092|F|24|n=1
TTCGATAAAATGTCTAAGTATGTT
>FBgn0063430_invader1|2092|F|26|n=1
TTCGATAAAATGTCTAAGTATGTTCG
>FBgn0063433_gypsy4|3058|F|22|n=1
TTCTTCAAAAAGAGCGTGGAAT
>FBgn0063433_gypsy4|3040|R|28|n=1
TTTTGAAGAACTTGGATTTTTCTTGAGA
>FBgn0063433_gypsy4|3044|R|24|n=1
TTTTGAAGAACTTGGATTTTTCTT
>FBgn0063440_baggins|5170|F|21|n=1
TTGCACAAAATTGGCATTGCA
>FBgn0063440_baggins|5154|R|26|n=1
TTTTGTGCAAATGGCTGTGAAGTCGG
>FBgn0063919_Max-element|3887|R|21|n=2
TTGCTGAGAAGCGTGTTGAGC
>FBgn0063919_Max-element|3898|F|23|n=1
TTCTCAGCAAGTTCTGGGAGGTG
>FBgn0063919_Max-element|3898|F|24|n=2
TTCTCAGCAAGTTCTGGGAGGTGG
>FBgn0063919_Max-element|3898|F|25|n=1
TTCTCAGCAAGTTCTGGGAGGTGGA
>FBgn0063919_Max-element|3898|F|24|n=1
TTCTCAGCAAGTTCTGGGAGGTGT
>FBgn0067385_invader6|3024|F|21|n=1
TTGACTAGAATGACTTAGACT
>FBgn0067385_invader6|3007|R|27|n=4
TTCTAGTCAAAGTCGAAGGACTGCATA
>FBgn0067385_invader6|3008|R|26|n=3
TTCTAGTCAAAGTCGAAGGACTGCAT
>FBgn0067385_invader6|3009|R|25|n=5
TTCTAGTCAAAGTCGAAGGACTGCA
>FBgn0067385_invader6|3010|R|24|n=4
TTCTAGTCAAAGTCGAAGGACTGC
>FBgn0067385_invader6|3011|R|23|n=1
TTCTAGTCAAAGTCGAAGGACTG
>FBgn0067385_invader6|3014|R|20|n=1
TTCTAGTCAAAGTCGAAGGA
>FBgn0067385_invader6|3024|F|26|n=1
TTGACTAGAATGACTTAGACTTAGAA
>FBgn0067624_BS3|1016|R|20|n=1
TTGATGCCAATGTTCCAACG
>FBgn0067624_BS3|1026|F|26|n=1
TTGGCATCAATGGTGACAAATCAGCG
>FBgn0067624_BS3|1026|F|24|n=1
TTGGCATCAATGGTGACAAATCTG
>FBgn0067624_BS3|1026|F|25|n=1
TTGGCATCAATGGTGACAAATCTGC