Mercurial > repos > avowinkel > package_bwa_0_7_12

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author avowinkel
date Tue, 09 Jun 2015 19:26:48 -0400
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<?xml version="1.0"?>
<tool_dependency>
    <package name="bwa" version="0.7.12">
        <install version="1.0">
            <actions>
                <action type="download_by_url">http://downloads.sourceforge.net/project/bio-bwa/bwa-0.7.12.tar.bz2</action>
                <action type="shell_command">make</action>
                <action type="move_file">
                    <source>bwa</source>
                    <destination>$INSTALL_DIR/bin</destination>
                </action>
                <action type="set_environment">
                    <environment_variable name="PATH" action="prepend_to">$INSTALL_DIR/bin</environment_variable>
                </action>
            </actions>
        </install>
    </package>
</tool_dependency>