|
0
|
1 <?xml version="1.0"?>
|
|
|
2 <tool_dependency>
|
|
|
3 <package name="picard" version="1.135">
|
|
|
4 <install version="1.0">
|
|
|
5 <actions_group>
|
|
|
6 <actions architecture="x86_64" os="linux">
|
|
|
7 <action type="download_by_url">https://github.com/broadinstitute/picard/releases/download/1.135/picard-tools-1.135.zip</action>
|
|
|
8 <action type="move_directory_files">
|
|
|
9 <source_directory>.</source_directory>
|
|
|
10 <destination_directory>$INSTALL_DIR</destination_directory>
|
|
|
11 </action>
|
|
|
12 </actions>
|
|
|
13 <action type="set_environment">
|
|
|
14 <environment_variable name="JAVA_JAR_PATH" action="set_to">$INSTALL_DIR</environment_variable>
|
|
|
15 </action>
|
|
|
16 </actions_group>
|
|
|
17 </install>
|
|
|
18 <readme>
|
|
|
19 This picard package dependency is retrieved directly from https://github.com/broadinstitute/picard/releases
|
|
|
20 </readme>
|
|
|
21 </package>
|
|
|
22 </tool_dependency>
|
