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planemo upload for repository https://github.com/ASaiM/galaxytools/tree/master/tools/cdhit/ commit 4a97d14fadd86dda8abd088023c7f9f2dcab2a88
author bebatut
date Fri, 04 May 2018 05:42:37 -0400
parents 54d811ad2b52
children
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CD_HIT memory usage
====================

By default, maximum of 4Gb is attributed to CD_HIT.

To change the maximum memory usage, you can edit the CD_HIT_MEM_OPTIONS in the file:

<tool_dependency_dir>/cd-hit/4.6.4/bebatut/cdhit/<hash_string>/env.sh

For example to increase to 8Gb, you will write:

CD_HIT_MEM_OPTIONS='-M 8000'