Mercurial > repos > bebatut > export2graphlan

diff tool_dependencies.xml @ 0:b344522045f3 draft

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planemo upload for repository https://github.com/ASaiM/galaxytools/tree/master/tools/export2graphlan/ commit 1b95965e1a861ec37867be554e324eb5bc1ece82-dirty
author bebatut
date Wed, 20 Apr 2016 06:09:29 -0400
parents
children d7cf3b50a074
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--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/tool_dependencies.xml	Wed Apr 20 06:09:29 2016 -0400
@@ -0,0 +1,35 @@
+<?xml version="1.0"?>
+<tool_dependency>
+    <package name="pandas" version="0.16">
+        <repository changeset_revision="ea929a7f2976" name="package_python_2_7_pandas_0_16" owner="iuc" toolshed="https://toolshed.g2.bx.psu.edu" />
+    </package>
+    <package name="scipy" version="0.16">
+        <repository changeset_revision="80f8536c6dc2" name="package_python_2_7_scipy_0_16" owner="iuc" toolshed="https://toolshed.g2.bx.psu.edu" />
+    </package>
+    <package name="matplotlib" version="1.4">
+        <repository changeset_revision="f7424e1cf115" name="package_python_2_7_matplotlib_1_4" owner="iuc" toolshed="https://toolshed.g2.bx.psu.edu" />
+    </package>
+    <package name="export2graphlan" version="0.19">
+        <install version="1.0">
+            <actions>
+                <action type="shell_command">
+                    hg clone -r d6c10c1 https://hg@bitbucket.org/CibioCM/export2graphlan
+                </action>
+                <action type="move_file">
+                    <source>export2graphlan.py</source>
+                    <destination>$INSTALL_DIR/bin/</destination>
+                </action>
+                <action type="move_directory_files">
+                    <source_directory>hclust2</source_directory>
+                    <destination_directory>$INSTALL_DIR/bin/hclust2/</destination_directory>
+                </action>
+                <action type="set_environment">
+                    <environment_variable action="set_to" name="EXPORT2GRAPHLAN_DIR">$INSTALL_DIR/</environment_variable>
+                    <environment_variable action="prepend_to" name="PATH">$INSTALL_DIR/bin/</environment_variable>
+                    <environment_variable action="prepend_to" name="PATH">$INSTALL_DIR/</environment_variable>
+                </action>
+            </actions>
+        </install>
+        <readme />
+    </package>
+</tool_dependency>