annotate tool_dependencies.xml @ 0:b344522045f3 draft

planemo upload for repository https://github.com/ASaiM/galaxytools/tree/master/tools/export2graphlan/ commit 1b95965e1a861ec37867be554e324eb5bc1ece82-dirty
author bebatut
date Wed, 20 Apr 2016 06:09:29 -0400
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children d7cf3b50a074
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b344522045f3 planemo upload for repository https://github.com/ASaiM/galaxytools/tree/master/tools/export2graphlan/ commit 1b95965e1a861ec37867be554e324eb5bc1ece82-dirty
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1 <?xml version="1.0"?>
b344522045f3 planemo upload for repository https://github.com/ASaiM/galaxytools/tree/master/tools/export2graphlan/ commit 1b95965e1a861ec37867be554e324eb5bc1ece82-dirty
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2 <tool_dependency>
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3 <package name="pandas" version="0.16">
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4 <repository changeset_revision="ea929a7f2976" name="package_python_2_7_pandas_0_16" owner="iuc" toolshed="https://toolshed.g2.bx.psu.edu" />
b344522045f3 planemo upload for repository https://github.com/ASaiM/galaxytools/tree/master/tools/export2graphlan/ commit 1b95965e1a861ec37867be554e324eb5bc1ece82-dirty
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5 </package>
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6 <package name="scipy" version="0.16">
b344522045f3 planemo upload for repository https://github.com/ASaiM/galaxytools/tree/master/tools/export2graphlan/ commit 1b95965e1a861ec37867be554e324eb5bc1ece82-dirty
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7 <repository changeset_revision="80f8536c6dc2" name="package_python_2_7_scipy_0_16" owner="iuc" toolshed="https://toolshed.g2.bx.psu.edu" />
b344522045f3 planemo upload for repository https://github.com/ASaiM/galaxytools/tree/master/tools/export2graphlan/ commit 1b95965e1a861ec37867be554e324eb5bc1ece82-dirty
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8 </package>
b344522045f3 planemo upload for repository https://github.com/ASaiM/galaxytools/tree/master/tools/export2graphlan/ commit 1b95965e1a861ec37867be554e324eb5bc1ece82-dirty
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9 <package name="matplotlib" version="1.4">
b344522045f3 planemo upload for repository https://github.com/ASaiM/galaxytools/tree/master/tools/export2graphlan/ commit 1b95965e1a861ec37867be554e324eb5bc1ece82-dirty
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10 <repository changeset_revision="f7424e1cf115" name="package_python_2_7_matplotlib_1_4" owner="iuc" toolshed="https://toolshed.g2.bx.psu.edu" />
b344522045f3 planemo upload for repository https://github.com/ASaiM/galaxytools/tree/master/tools/export2graphlan/ commit 1b95965e1a861ec37867be554e324eb5bc1ece82-dirty
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11 </package>
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12 <package name="export2graphlan" version="0.19">
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13 <install version="1.0">
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14 <actions>
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15 <action type="shell_command">
b344522045f3 planemo upload for repository https://github.com/ASaiM/galaxytools/tree/master/tools/export2graphlan/ commit 1b95965e1a861ec37867be554e324eb5bc1ece82-dirty
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16 hg clone -r d6c10c1 https://hg@bitbucket.org/CibioCM/export2graphlan
b344522045f3 planemo upload for repository https://github.com/ASaiM/galaxytools/tree/master/tools/export2graphlan/ commit 1b95965e1a861ec37867be554e324eb5bc1ece82-dirty
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17 </action>
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18 <action type="move_file">
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19 <source>export2graphlan.py</source>
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20 <destination>$INSTALL_DIR/bin/</destination>
b344522045f3 planemo upload for repository https://github.com/ASaiM/galaxytools/tree/master/tools/export2graphlan/ commit 1b95965e1a861ec37867be554e324eb5bc1ece82-dirty
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21 </action>
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22 <action type="move_directory_files">
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23 <source_directory>hclust2</source_directory>
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24 <destination_directory>$INSTALL_DIR/bin/hclust2/</destination_directory>
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25 </action>
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26 <action type="set_environment">
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27 <environment_variable action="set_to" name="EXPORT2GRAPHLAN_DIR">$INSTALL_DIR/</environment_variable>
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28 <environment_variable action="prepend_to" name="PATH">$INSTALL_DIR/bin/</environment_variable>
b344522045f3 planemo upload for repository https://github.com/ASaiM/galaxytools/tree/master/tools/export2graphlan/ commit 1b95965e1a861ec37867be554e324eb5bc1ece82-dirty
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29 <environment_variable action="prepend_to" name="PATH">$INSTALL_DIR/</environment_variable>
b344522045f3 planemo upload for repository https://github.com/ASaiM/galaxytools/tree/master/tools/export2graphlan/ commit 1b95965e1a861ec37867be554e324eb5bc1ece82-dirty
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30 </action>
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31 </actions>
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32 </install>
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33 <readme />
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34 </package>
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35 </tool_dependency>