diff test-data/test02.fasta @ 0:f7c0a0030254 draft

planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/agat commit 0851e9e6d46223a8233c56f3b0bcf14e19d63916

--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/test-data/test02.fasta	Tue May 23 13:43:07 2023 +0000
@@ -0,0 +1,183 @@
+>nbis-gene-2 seq_id=NZ_CP027599.1 type=gene 5'extra=10nt 3'extra=20nt
+TCGTAAACCTATGAAATTTACCGTAGAACGTGAGCATTTATTAAAACCGCTACAACAGGT
+GAGCGGTCCGTTAGGTGGTCGTCCTACGCTACCGATTCTCGGTAATCTGCTGTTACAGGT
+TGCTGACGGTACGTTGTCGCTGACCGGTACTGATCTCGAGATGGAAATGGTGGCACGTGT
+TGCGCTGGTTCAGCCACACGAGCCAGGAGCGACGACCGTTCCGGCGCGCAAATTCTTTGA
+TATCTGCCGTGGTCTGCCTGAAGGCGCGGAAATTGCCGTGCAGCTGGAAGGTGAACGGAT
+GCTGGTACGCTCCGGGCGTAGCCGTTTTTCGCTGTCTACCCTGCCAGCGGCGGATTTCCC
+GAACCTCGATGACTGGCAGAGTGAAGTCGAATTTACCCTGCCGCAGGCAACGATGAAGCG
+TCTGATTGAAGCGACCCAGTTTTCGATGGCGCATCAGGACGTTCGCTATTACTTAAATGG
+TATGCTGTTTGAAACCGAAGGTGAAGAACTGCGCACCGTGGCAACCGACGGCCACCGTCT
+GGCGGTCTGTTCAATGCCAATTGGTCAATCTTTGCCAAGCCATTCGGTGATCGTACCGCG
+TAAAGGCGTGATTGAACTGATGCGTATGCTCGACGGCGGCGACAATCCGCTGCGCGTGCA
+GATTGGCAGCAACAATATTCGCGCCCACGTTGGCGACTTTATCTTCACCTCCAAACTGGT
+GGATGGTCGCTTCCCGGATTACCGCCGCGTTCTGCCGAAGAATCCGGACAAACATCTGGA
+AGCTGGCTGCGATCTGCTCAAGCAGGCGTTTGCCCGTGCGGCAATTCTCTCTAACGAGAA
+ATTCCGCGGCGTGCGCCTGTATGTCAGCGAAAACCAGCTGAAAATCACCGCCAACAACCC
+GGAACAGGAAGAAGCGGAAGAGATCCTCGACGTTACCTATAGCGGTGCGGAGATGGAAAT
+CGGCTTCAACGTCAGCTATGTGCTGGATGTTCTGAACGCGCTGAAATGCGAAAACGTCCG
+CATGATGCTGACCGATTCGGTTTCCAGCGTGCAGATTGAAGATGCCGCATCACAGTCGGC
+TGCCTATGTTGTCATGCCAATGAGACTGTAATGTCCCTCACCCGCTTGTTG
+>nbis-gene-3 seq_id=NZ_CP027599.1 type=gene 5'extra=10nt 3'extra=20nt
+TGAGACTGTAATGTCCCTCACCCGCTTGTTGATCCGCGATTTCCGCAACATTGAAACCGC
+GGATCTCGCTTTATCTCCCGGCTTTAACTTTCTGGTAGGTGCCAACGGCAGTGGCAAAAC
+CAGCGTGCTGGAAGCCATCTATACGCTCGGCCATGGTCGGGCGTTTCGCAGTTTGCAGAT
+TGGTCGCGTCATTCGCCATGAGCAGGAGGCATTTGTTCTCCATGGGCGATTACAGGGCGA
+AGAGCGCGAGACGGCGATTGGCTTAACCAAGGACAAACAGGGCGACAGCAAAGTCCGCAT
+CGACGGTACTGACGGGCATAAAGTCGCGGAACTGGCGCACCTGATGCCAATGCAGCTGAT
+AACGCCAGAAGGGTTTACTTTACTCAACGGCGGCCCCAAATACAGAAGAGCATTCCTCGA
+CTGGGGATGCTTTCACAACGAACCCGGATTTTTCACCGCCTGGAGCAATCTCAAGCGATT
+GCTCAAGCAGCGCAATGCGGCGCTGCGCCAGGTGACACGTTACGAACAGCTACGCCCGTG
+GGATAAAGAACTGATCCCGCTGGCGGAGCAAATCAGCACCTGGCGCGCGGAGTATAGCGC
+CGGTATCGCGGCCGATATGGCCGATACCTGTAAGCAATTTCTCCCTGAGTTTTCTCTGAC
+TTTCTCTTTCCAGCGCGGCTGGGAGAAAGAGACAGAATATGCTGAGGTGCTGGAACGTAA
+TTTTGAACGCGATCGCCAGCTAACCTACACCGCGCATGGCCCGCATAAAGCGGACTTACG
+CATTCGCGCCGACGGTGCGCCGGTGGAAGATACCTTATCGCGTGGGCAGCTTAAGCTGTT
+GATGTGCGCCTTACGTCTGGCGCAAGGAGAGTTCCTCACCCGTGAAAGCGGGCGGCGGTG
+TCTCTACCTGATAGATGATTTTGCCTCTGAGCTTGATGATGAGCGTCGTGGGTTGCTTGC
+CAGCCGCTTAAAAGCGACGCAATCACAGGTCTTTGTCAGCGCGATCAGTGCTGAACACGT
+TATAGACATGTCGGACGAAAATTCGAAGATGTTTACCGTGGAAAAGGGTAAAATAACGGA
+TTAACCCAAGTATAAATGAGCGAG
+>nbis-gene-4 seq_id=NZ_CP027599.1 type=gene 5'extra=10nt 3'extra=20nt
+AGAAACGTTGATGTCGAATTCTTATGACTCCTCCAGTATCAAAGTCCTGAAAGGGCTGGA
+TGCGGTGCGTAAGCGCCCGGGTATGTATATCGGCGACACGGATGACGGCACCGGTCTGCA
+CCACATGGTATTCGAGGTGGTAGATAACGCTATCGACGAAGCGCTCGCGGGTCACTGTAA
+AGAAATTATCGTCACCATTCACGCCGACAACTCTGTCTCTGTACAGGATGACGGGCGCGG
+CATTCCGACCGGTATTCACCCGGAAGAGGGCGTATCGGCGGCGGAAGTGATCATGACCGT
+TCTGCACGCAGGCGGTAAATTCGACGATAACTCCTATAAAGTGTCCGGCGGTCTGCACGG
+CGTTGGTGTTTCGGTAGTAAACGCCCTGTCGCAAAAACTGGAGCTGGTTATCCAGCGCGA
+GGGTAAAATTCACCGTCAGATCTACGAACACGGTGTACCGCAGGCCCCGCTGGCGGTTAC
+CGGCGAGACTGAAAAAACCGGCACCATGGTGCGTTTCTGGCCTAGCCTCGAAACTTTCAC
+CAATGTGACCGAGTTCGAATATGAAATTCTGGCGAAACGTCTGCGTGAGTTGTCGTTCCT
+CAACTCCGGCGTTTCCATTCGTCTGCGCGACAAGCGCGACGGCAAAGAAGACCACTTCCA
+CTATGAAGGCGGCATCAAGGCGTTCGTTGAATATCTGAACAAGAACAAAACGCCGATCCA
+CCCGAATATCTTCTACTTCTCCACTGAAAAAGACGGTATTGGCGTCGAAGTGGCGTTGCA
+GTGGAACGATGGCTTCCAGGAAAACATCTACTGCTTTACCAACAACATTCCGCAGCGTGA
+CGGCGGTACTCACCTGGCAGGCTTCCGTGCGGCGATGACCCGTACCCTGAACGCCTACAT
+GGACAAAGAAGGCTACAGCAAAAAAGCCAAAGTTAGCGCCACCGGTGACGATGCGCGTGA
+AGGCCTGATTGCGGTCGTTTCCGTGAAAGTGCCGGACCCGAAATTCTCCTCCCAGACCAA
+AGACAAACTGGTTTCTTCTGAGGTGAAATCAGCGGTTGAACAGCAGATGAACGAACTGCT
+GGCAGAATACCTGCTGGAAAACCCAACCGACGCGAAAATCGTGGTTGGCAAAATTATCGA
+TGCTGCCCGTGCCCGTGAAGCGGCGCGTCGCGCGCGTGAAATGACCCGCCGTAAAGGTGC
+GCTCGACTTAGCGGGCCTGCCGGGCAAACTGGCAGACTGCCAGGAACGCGATCCGGCGCT
+TTCCGAACTGTACTTGGTGGAAGGGGACTCCGCGGGCGGCTCTGCGAAGCAGGGGCGTAA
+CCGCAAGAACCAGGCGATTCTGCCGCTGAAGGGTAAAATCCTCAACGTCGAGAAAGCGCG
+CTTCGATAAGATGCTCTCTTCTCAGGAAGTGGCGACGCTTATCACCGCGCTTGGCTGTGG
+TATCGGTCGTGACGAGTACAACCCGGACAAACTGCGTTATCACAGCATCATCATCATGAC
+CGATGCGGACGTCGACGGCTCGCACATTCGTACGCTGCTGTTGACCTTCTTCTATCGTCA
+GATGCCGGAAATCGTTGAACGCGGTCACGTCTACATCGCTCAGCCGCCGCTGTACAAAGT
+GAAGAAAGGCAAGCAGGAACAGTACATTAAAGACGACGAAGCGATGGATCAGTACCAGAT
+CTCTATCGCGCTGGATGGCGCAACGCTGCACACCAACGCCAGCGCACCGGCATTGGCTGG
+CGAAGCGTTAGAGAAATTGGTGTCTGAGTACAACGCGACGCAGAAAATGATCAACCGCAT
+GGAGCGTCGTTATCCGAAAGCAATGCTGAAAGAGCTTATCTATCAGCCGACGCTGACGGA
+AGCCGACCTCTCTGATGAGCAGACCGTTACCCGCTGGGTGAACGCGCTGGTCAGCGAACT
+GAACGACAAAGAACAGCACGGCAGCCAGTGGAAGTTTGATGTCCACACCAATGCCGAACA
+AAACCTGTTCGAGCCGATTGTTCGCGTGCGTACCCACGGTGTGGATACTGACTATCCGCT
+GGATCACGAGTTTATCACCGGTGGCGAATATCGTCGTATCTGCACGCTGGGTGAGAAACT
+GCGTGGCTTGCTGGAAGAAGATGCGTTTATCGAACGTGGCGAGCGTCGTCAGCCGGTAGC
+CAGCTTCGAGCAGGCGCTGGACTGGCTGGTGAAAGAGTCCCGTCGCGGCCTCTCCATCCA
+GCGTTATAAAGGTCTGGGCGAGATGAACCCGGAACAGCTGTGGGAAACCACCATGGACCC
+GGAAAGCCGTCGTATGCTGCGCGTTACCGTTAAGGATGCGATTGCCGCTGACCAGTTGTT
+CACCACGCTGATGGGCGACGCCGTTGAACCGCGCCGTGCGTTTATTGAAGAGAACGCCCT
+GAAAGCGGCGAATATCGATATTTAATGGCGCTAACCATGCGAGCG
+>nbis-gene-5 seq_id=NZ_CP027599.1 type=gene 5'extra=10nt 3'extra=20nt
+GGTGATTATCATGGGGCTTTTTGATGAAGTTGTCGGTGCCTTTCTGAAAGGCGATGCGGG
+GAAATATCAGGCTATTTTAAGTTGGGTTGAGGAGCAGGGCGGCATTCAGGTGCTGCTGGA
+AAAACTGCAAAGTGGCGGCTTAGGGGCCATTCTCTCAACCTGGCTGAGTAATCAACAGGG
+CAATCAATCGGTTAGTGGCGAGCAACTGGAATCGGCGCTCGGCACAAATGCGGTGTCCGA
+TCTTGGACAAAAACTTGGCGTGGATACCAGTACAGCTTCCAGTTTACTGGCAGAACAATT
+GCCGAAGATTATTGATGCGCTCTCACCGCAAGGTGAAGTGTCTCCACAAGCCAATAACGA
+TCTGCTTTCCGCAGGCATGGAACTGCTGAAAGGGAAACTCTTCCGCTAAGCAAATGGGGA
+GCATGCAAC
+>nbis-gene-6 seq_id=NZ_CP027599.1 type=gene 5'extra=10nt 3'extra=20nt
+TGGGGAACTCATGGCTATCAAACTCATTGCTATCGATATGGATGGCACCCTTCTGCTACC
+CGATCACACCATTTCACCCGCCGTTAAAAATGCGATTGCCGCAGCTCGCGCCCGTGGCGT
+GAATGTCGTGCTAACGACGGGTCGCCCTTATGCAGGTGTTCACAATTACCTGAAAGAGCT
+GCATATGGAACTGCCGGGCGACTACTGCATTACTTATAACGGCGCGCTGGTACAGAAGGC
+CGCTGATGGTAGCACCGTGGCGCAAACCGCTCTCAGCTATGACGACTACCGTTTCCTGGA
+AAAACTCTCTCGCGAAGTCGGTTCTCATTTCCACGCCCTGGACCGCACCACGCTGTACAC
+CGCCAACCGTGATATCAGCTACTACACGGTGCATGAATCCTTCGTTGCCACAATTCCGCT
+GGTGTTCTGCGAAGCGGAGAAAATGGACCCCAATACCCAGTTCCTGAAAGTGATGATGAT
+TGATGAACCCGCCATCCTCGACCAGGCTATCGCGCGTATTCCGCAGGAAGTGAAAGAGAA
+ATATACCGTGCTGAAAAGTGCGCCGTACTTCCTCGAAATCCTCGATAAACGCGTTAACAA
+AGGTACGGGGGTGAAATCACTGGCCGACGTGTTAGGTATTAAACCGGAAGAAATCATGGC
+GATTGGCGATCAGGAAAACGACATCGCAATGATTGAATATGCAGGCGTCGGTGTGGCGAT
+GGATAACGCTATTCCTTCGGTGAAAGAAGTGGCGAACTTTGTCACCAAATCCAACCTTGA
+AGATGGCGTGGCGTTTGCTATTGAGAAGTATGTGCTGAATTAATCAGTGGACGGGCAAAC
+AGC
+>nbis-gene-7 seq_id=NZ_CP027599.1 type=gene 3'extra=20nt 5'extra=10nt
+AGGATTAATCATGAAGTTGAATTTTAAGGGATTTTTTAAGGCTGCCGGTTTATTCCCACT
+GGCGCTGATGCTTTCAGGCTGTATCTCGTATGCTCTGGTTTCCCATACCGCAAAGGGTAG
+TTCAGGAAAGTATCAATCGCAGTCAGACACCATCACTGGGCTATCGCAGGCAAAAGATAG
+TAATGGAACAAAAGGCTATGTTTTTGTAGGGGAATCGCTGGATTACCTTATCACTGATGG
+TGCCGATGACATCGTTAAGATGCTCAATGATCCAGCACTTAACCGGCACAATATTCAGGT
+TGCCGATGACGCAAGATTTGTTTTAAATGCGGGGAAAAAGAAATTTACCGGCACAATATC
+GCTTTACTACCACTGGAATAACGAAGAAGAAAAGGCACTGGCAACGCATTATGGTTTTGC
+CTGTGGTGTTCAACACTGTACCAGGTCACTGGAAAACCTAAAAGGCACAATCCATGAGAA
+AAATAAAAACATGGATTACTCAAAGGTGATGGCGTTCTATCATCCGTTTAAAGTGCGATT
+TTATGAATACTATTCACCCAGAGGCATTCCGGATGGTGTTTCCGCAGCATTACTGCCAGT
+GACTGTTACGCTGGACATCATTACTGCACCGCTGCAATTTCTGGTTGTATATGCAGTAAA
+CCAATAATCAGTAAGCGGGCAAACGCG
+>nbis-gene-8 seq_id=NZ_CP027599.1 type=gene 5'extra=10nt 3'extra=20nt
+AGGACTCTCCATGACTCTCAATAAAACCGATCGCATTGTCATTACGCTGGGTAAACAGAT
+TGTTCACGGCAAATACGTACCTGGCTCGCCACTTCCGGCTGAGGCGGAGCTCTGTGAAGA
+GTTTGCAACCTCGCGCAACATCATCCGTGAGGTGTTCCGTTCGTTGATGGCGAAACGGCT
+GATTGAAATGAAACGTTATCGCGGCGCGTTTGTGGCACCGCGTAACCAGTGGAATTACCT
+CGACACTGACGTACTGCAATGGGTGCTGGAAAACGACTACGACCCACGGCTTATCAGTGC
+CATGAGCGAAGTGCGAAATCTGGTGGAACCGGCGATTGCCCGTTGGGCAGCAGAGCGCGC
+GACTTCCAGCGATCTGGCGCAGATTGAATCGGCGCTGAACGAGATGATTGCCAACAATCA
+GGACCGCGAAGCGTTTAACGAAGCGGATATTCGCTACCACGAGGCGGTGCTGCAGTCGGT
+ACATAACCCGGTGTTACAGCAACTTAGCATTGCGATCAGTTCGTTGCAGCGGGCGGTTTT
+TGAACGAACCTGGATGGGCGATGAGGCCAACATGCCGCAAACGCTCCAGGAACATAAGGC
+GCTGTTCGATGCAATACGGCATCAGGACGGCGATGCGGCAGAGCAGGCGGCGCTTACCAT
+GATCGCCAGCTCGACACGAAGGTTAAAGGAAATCACATGACAGCTCGCTACATCGCAATT
+>nbis-gene-9 seq_id=NZ_CP027599.1 type=gene 5'extra=10nt 3'extra=20nt
+AGGAAATCACATGACAGCTCGCTACATCGCAATTGACTGGGGATCGACCAATCTTCGCGC
+CTGGCTTTATCAGGGCGACCACTGCCTGGAGAGCAGGCAATCAGAAGCAGGCGTCACGCG
+CCTGAACGGAAAATCTCCGGCTGCGGTGTTAGCAGAAGTCACGACCGACTGGCGTGAAGA
+GAATACGCCAGTGGTAATGGCAGGAATGGTCGGCAGCAATGTCGGCTGGAAAGTTGCTCC
+GTATTTATCTGTTCCTGCCCGTTTTTCGTCTATTGGCGAACAATTAACGTCTGTTGGCGA
+CAATATCTGGATTATTCCCGGATTATGCGTCTCTCATGACGATAACCACAATGTGATGCG
+CGGCGAAGAAACACAATTGATCGGCGCGCGAACTCTGGCTCCTTCCTCTCTTTATGTTAT
+GCCCGGTACGCATTGCAAATGGGTGCAGGCCGATAGCCAGCAAATCAACGATTTTCGCAC
+CGTGATGACCGGTGAATTACATCATTTACTGTTAAATCACTCATTGATTGGCGCAGGTTT
+GCCGCCGCAGGAAAACTCTGCCGATGCCTTCGCGGCTGGCCTTGAGCGCGGCCTTAATGC
+GCCCGCCATATTGCCGCAGCTTTTTGAAGTTCGCGCCTCGCATGTGCTGGGAACACTTCC
+CCGCGAACAGGTCAGCGAATTTCTCTCTGGTTTGTTGATTGGCGCAGAGGTTGCCAGTAT
+GCGCGACTATGTGACCCATCAACACGCCATCACCCTTGTCGCCGGAACATCGCTGACCGC
+GCGCTACCAGCAAGCCTTTCAGGCGATGGGTTGCGACGTGACGGCGGTGGCGGGCGACAC
+GGCATTTCAGGCTGGTATAAGGAGCATCGCTCATGCAGTGGCAAACTAAACTTCCGCTGA
+TCGCCATTT
+>nbis-gene-10 seq_id=NZ_CP027599.1 type=gene 5'extra=10nt 3'extra=20nt
+AGCATCGCTCATGCAGTGGCAAACTAAACTTCCGCTGATCGCCATTTTGCGCGGCATTAA
+GCCCGACGAGGCGCTGGCGCATGTTGGCGCGGTGATTGACGCCGGGTTCGACGCGGTTGA
+AATCCCGCTGAATTCCCCACAATGGGAGCAAAGCATTCCCGCCATCGTTGATGCGTATGG
+CGACAAGGCGTTGATTGGCGCAGGTACGGTACTGAAACCTGAACAGGTCGATGCGCTCGC
+CAGGATGGGTTGTCAGCTCATCGTTACGCCCAATATCCATAGTGAAGTGATCCGCCGTGC
+GGTGGGCTACGGCATGACCGTCTGCCCCGGCTGCGCGACGGCGACCGAAGCCTTTACCGC
+GCTCGAAGCGGGCGCGCAGGCGCTGAAAATATTTCCGTCATCGGCTTTTGGTCCGCAATA
+CATCAAAGCGTTAAAAGCGGTATTGCCATCGGACATCGCAGTCTTTGCCGTTGGCGGCGT
+GACGCCAGAAAACCTGGCGCAGTGGATAGACGCAGGTTGTGCTGGGGCGGGCTTAGGCAG
+CGATCTCTATCGCGCCGGGCAGTCCGTAGAACGCACCGCGCAGCAGGCAGCAGCATTTGT
+TAAGGCGTATCGAGAGGCAGTGCAATGAAAATCACCAAAATTACCACG
+>nbis-gene-11 seq_id=NZ_CP027599.1 type=gene 5'extra=10nt 3'extra=20nt
+AGGCAGTGCAATGAAAATCACCAAAATTACCACGTATCGTTTACCTCCCCGCTGGATGTT
+CCTGAAAATTGAAACCGATGAAGGCGTGGTCGGTTGGGGCGAGCCCGTGATTGAAGGCCG
+CGCCCGTACGGTGGAAGCGGCAGTTCACGAGCTGGGTGACTATTTGATTGGTCAGGATCC
+TTCGCGCATCAATGACTTATGGCAAGTGATGTATCGCGCCGGATTTTATCGTGGCGGTCC
+AATCCTGATGAGCGCCATTGCCGGGATCGACCAGGCGTTATGGGATATCAAAGGCAAAGT
+GCTGAATGCGCCGGTCTGGCAACTGATGGGCGGCCTGGTTCGCGACAAAATTAAAGCCTA
+CAGTTGGGTCGGCGGCGATCGTCCGGCGGATGTTATCGACGGCATTAAAACCCTGCGCGA
+AATCGGCTTCGATACCTTCAAACTGAACGGTTGTGAAGAACTGGGGCTAATTGATAACTC
+CCGCGCGGTAGATGCGGCAGTCAACACCGTGGCACAAATTCGTGAAGCTTTTGGCAATCA
+GATTGAGTTTGGTCTTGATTTCCACGGTCGCGTCAGCGCGCCAATGGCGAAAGTGCTGAT
+TAAAGAACTGGAGCCGTATCGCCCGCTGTTTATTGAAGAGCCGGTGCTGGCGGAACAAGC
+CGAATACTACCCGAAATTGGCGGCACAAACGCATATTCCACTGGCGGCAGGTGAGCGCAT
+GTTCTCACGTTTCGATTTTAAACGCGTGCTGGAGGCAGGCGGTATTTCGATTCTGCAACC
+GGATCTCTCCCATGCAGGCGGTATTACCGAATGCTACAAAATTGCTGGAATGGCAGAAGC
+CTATGATGTGACCCTTGCGCCGCACTGTCCGCTCGGACCGATTGCACTGGCAGCTTGCCT
+GCATATCGACTTTGTTTCCTATAACGCGGTACTTCAGGAACAAAGTATGGGCATTCATTA
+CAACAAAGGCGCGGAGTTACTCGACTTTGTGAAAAACAAAGAAGACTTCAGTATGGTTGG
+CGGCTTCTTTAAACCGTTAACGAAACCGGGCTTAGGTGTGGAAATCGACGAAGCTAAAGT
+TATTGAGTTCAGTAAAAATGCCCCGGACTGGCGTAATCCGCTCTGGCGTCATGAAGATAA
+CAGCGTAGCAGAGTGGTAATTCCTGCCACGTAAGCCCCT