Mercurial > repos > bgruening > agat
view test-data/test09.txt @ 2:e009d8260be2 draft
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/agat commit 8eb20f601bc1d2a50c8877b7d0ade057e8f86eae
author | bgruening |
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date | Thu, 07 Sep 2023 05:29:24 +0000 |
parents | f7c0a0030254 |
children |
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Functional info gene@transcript records: _____________________________________________________________________________ | | Nb holded by | Nb gene | | | gene | holding it | |_____________________________________________________________________________| | name | 10 | 10 | |_____________________________________________________________________________| | product | 0 | 0 | |_____________________________________________________________________________| | description | 0 | 0 | |_____________________________________________________________________________| | ontology_term | 0 | 0 | |_____________________________________________________________________________| | dbxref | 0 | 0 | |_____________________________________________________________________________| | dbxref:Genbank | 0 | 0 | |_____________________________________________________________________________| Nb gene = 10 Nb gene with <name> attribute = 10 Nb gene without <name> attribute = 0 Nb gene with <product> attribute = 0 Nb gene without <product> attribute = 10 Nb gene with <description> attribute = 0 Nb gene without <description> attribute = 10 Nb gene with <ontology_term> attribute = 0 Nb gene without <ontology_term> attribute = 10 Nb gene with <dbxref> attribute = 0 Nb gene without <dbxref> attribute = 10 Nb gene with <Genbank> dbxref = 0 Nb gene without <Genbank> dbxref = 10 _______________________________________________________________________________________________________ | | Nb holded by | Nb transcript | Nb gene with | | | transcript | holding it | transcript holding it | |_______________________________________________________________________________________________________| | name | 10 | 10 | 10 | |_______________________________________________________________________________________________________| | product | 0 | 0 | 0 | |_______________________________________________________________________________________________________| | description | 0 | 0 | 0 | |_______________________________________________________________________________________________________| | ontology_term | 0 | 0 | 0 | |_______________________________________________________________________________________________________| | dbxref | 0 | 0 | 0 | |_______________________________________________________________________________________________________| | dbxref:Genbank | 0 | 0 | 0 | |_______________________________________________________________________________________________________| Nb gene = 10 Nb transcript = 10 Nb gene with <name> attribute = 10 Nb gene without <name> attribute = 0 Nb transcript with <name> attribute = 10 Nb transcript without <name> attribute = 0 Nb gene with <product> attribute = 0 Nb gene without <product> attribute = 10 Nb transcript with <product> attribute = 0 Nb transcript without <product> attribute = 10 Nb gene with <description> attribute = 0 Nb gene without <description> attribute = 10 Nb transcript with <description> attribute = 0 Nb transcript without <description> attribute = 10 Nb gene with <ontology_term> attribute = 0 Nb gene without <ontology_term> attribute = 10 Nb transcript with <ontology_term> attribute = 0 Nb transcript without <ontology_term> attribute = 10 Nb gene with <dbxref> attribute = 0 Nb gene without <dbxref> attribute = 10 Nb transcript with <dbxref> attribute = 0 Nb transcript without <dbxref> attribute = 10 Nb gene with Genbank dbxref = 0 Nb gene without Genbank dbxref = 10 Nb transcript with Genbank dbxref = 0 Nb transcript without Genbank dbxref = 10 _____________________________________________________________________________ | | Nb holded by | Nb cds | | | cds | holding it | |_____________________________________________________________________________| | name | 10 | 10 | |_____________________________________________________________________________| | product | 10 | 10 | |_____________________________________________________________________________| | description | 0 | 0 | |_____________________________________________________________________________| | ontology_term | 12 | 5 | |_____________________________________________________________________________| | dbxref | 10 | 10 | |_____________________________________________________________________________| | dbxref:Genbank | 10 | 10 | |_____________________________________________________________________________| Nb cds = 10 Nb cds with <name> attribute = 10 Nb cds without <name> attribute = 0 Nb cds with <product> attribute = 10 Nb cds without <product> attribute = 0 Nb cds with <description> attribute = 0 Nb cds without <description> attribute = 10 Nb cds with <ontology_term> attribute = 5 Nb cds without <ontology_term> attribute = 5 Nb cds with <dbxref> attribute = 10 Nb cds without <dbxref> attribute = 0 Nb cds with <Genbank> dbxref = 10 Nb cds without <Genbank> dbxref = 0 _____________________________________________________________________________ | | Nb holded by | Nb exon | | | exon | holding it | |_____________________________________________________________________________| | name | 10 | 10 | |_____________________________________________________________________________| | product | 10 | 10 | |_____________________________________________________________________________| | description | 0 | 0 | |_____________________________________________________________________________| | ontology_term | 12 | 5 | |_____________________________________________________________________________| | dbxref | 10 | 10 | |_____________________________________________________________________________| | dbxref:Genbank | 10 | 10 | |_____________________________________________________________________________| Nb exon = 10 Nb exon with <name> attribute = 10 Nb exon without <name> attribute = 0 Nb exon with <product> attribute = 10 Nb exon without <product> attribute = 0 Nb exon with <description> attribute = 0 Nb exon without <description> attribute = 10 Nb exon with <ontology_term> attribute = 5 Nb exon without <ontology_term> attribute = 5 Nb exon with <dbxref> attribute = 10 Nb exon without <dbxref> attribute = 0 Nb exon with <Genbank> dbxref = 10 Nb exon without <Genbank> dbxref = 0