Mercurial > repos > bgruening > alevin
changeset 8:04b494623f8e draft
"planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/salmon commit 515548aaa4b79af78c6ffc6bd55f72ee9504d30f"
| author | bgruening |
|---|---|
| date | Sat, 03 Oct 2020 18:49:31 +0000 |
| parents | ff78e9c7b0d8 |
| children | ecb9ea6269ee |
| files | alevin.xml |
| diffstat | 1 files changed, 10 insertions(+), 8 deletions(-) [+] |
line wrap: on
line diff
--- a/alevin.xml Sat Oct 03 18:21:49 2020 +0000 +++ b/alevin.xml Sat Oct 03 18:49:31 2020 +0000 @@ -232,10 +232,12 @@ </conditional> <param name="protocol" value="--chromium"/> <param name="tgmap" value="minitxp.tsv"/> - <param name="dumpMtx" value="Yes"/> - <param name="freqThreshold" value="5"/> - <param name="dumpFeatures" value="Yes"/> - <param name="keepCBFraction" value="1"/> + <section name="optional"> + <param name="keepCBFraction" value="1"/> + <param name="dumpFeatures" value="Yes"/> + <param name="freqThreshold" value="5"/> + <param name="dumpMtx" value="Yes"/> + </section> <output name="quants_mat.mtx" file="alevin_mat.mtx" ftype="mtx"/> </test> <test expect_num_outputs="14"> @@ -254,12 +256,12 @@ </conditional> <param name="protocol" value="--chromium"/> <param name="tgmap" value="minitxp.tsv"/> - <param name="dumpMtx" value="Yes"/> - <param name="freqThreshold" value="5"/> - <param name="dumpFeatures" value="Yes"/> - <param name="keepCBFraction" value="1"/> <section name="optional"> + <param name="keepCBFraction" value="1"/> + <param name="dumpFeatures" value="Yes"/> <param name="numCellBootstraps" value="2"/> + <param name="freqThreshold" value="5"/> + <param name="dumpMtx" value="Yes"/> </section> <output name="quants_mat.mtx" file="alevin_mat.mtx" ftype="mtx"/> </test>