Mercurial > repos > bgruening > create_tool_recommendation_model
comparison test-data/test_tool_usage @ 3:5b3c08710e47 draft
"planemo upload for repository https://github.com/bgruening/galaxytools/tree/recommendation_training/tools/tool_recommendation_model commit c635df659fe1835679438589ded43136b0e515c6"
| author | bgruening |
|---|---|
| date | Sat, 09 May 2020 05:38:23 -0400 |
| parents | 76251d1ccdcc |
| children | 4f7e6612906b |
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| 2:76251d1ccdcc | 3:5b3c08710e47 |
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| 1 upload1 2019-03-01 176 | 1 toolshed.g2.bx.psu.edu/repos/bgruening/rdock_rbdock/rdock_rbdock/0.1.1 2020-04-01 34568 |
| 2 toolshed.g2.bx.psu.edu/repos/devteam/fastqc/fastqc/0.72 2019-03-01 97 | 2 upload1 2020-04-01 18321 |
| 3 toolshed.g2.bx.psu.edu/repos/bgruening/deeptools_bam_coverage/deeptools_bam_coverage/3.0.2.0 2019-03-01 67 | 3 toolshed.g2.bx.psu.edu/repos/devteam/fastqc/fastqc/0.72+galaxy1 2020-04-01 2839 |
| 4 toolshed.g2.bx.psu.edu/repos/iuc/featurecounts/featurecounts/1.6.3+galaxy2 2019-03-01 53 | 4 toolshed.g2.bx.psu.edu/repos/bgruening/xchem_transfs_scoring/xchem_transfs_scoring/0.2.0 2020-04-01 1220 |
| 5 toolshed.g2.bx.psu.edu/repos/iuc/sra_tools/fastq_dump/2.9.1.3 2019-03-01 51 | 5 toolshed.g2.bx.psu.edu/repos/devteam/bowtie2/bowtie2/2.3.4.3+galaxy0 2020-04-01 958 |
| 6 toolshed.g2.bx.psu.edu/repos/devteam/samtools_flagstat/samtools_flagstat/2.0.2 2019-03-01 38 | 6 CONVERTER_gz_to_uncompressed 2020-04-01 919 |
| 7 toolshed.g2.bx.psu.edu/repos/bgruening/text_processing/tp_tail_tool/1.1.0 2019-03-01 38 | 7 Filter1 2020-04-01 800 |
| 8 toolshed.g2.bx.psu.edu/repos/iuc/multiqc/multiqc/1.7 2019-03-01 31 | 8 Cut1 2020-04-01 787 |
| 9 toolshed.g2.bx.psu.edu/repos/devteam/fastqc/fastqc/0.52 2019-03-01 30 | 9 __SET_METADATA__ 2020-04-01 685 |
| 10 toolshed.g2.bx.psu.edu/repos/iuc/rgrnastar/rna_star/2.6.0b-1 2019-03-01 28 | 10 toolshed.g2.bx.psu.edu/repos/pjbriggs/trimmomatic/trimmomatic/0.36.5 2020-04-01 643 |
| 11 CONVERTER_gz_to_uncompressed 2019-03-01 26 | 11 toolshed.g2.bx.psu.edu/repos/iuc/featurecounts/featurecounts/1.6.4+galaxy1 2020-04-01 627 |
| 12 toolshed.g2.bx.psu.edu/repos/bgruening/deeptools_bam_compare/deeptools_bam_compare/3.0.2.0 2019-03-01 25 | 12 toolshed.g2.bx.psu.edu/repos/iuc/rgrnastar/rna_star/2.7.2b 2020-04-01 605 |
| 13 toolshed.g2.bx.psu.edu/repos/pjbriggs/trimmomatic/trimmomatic/0.36.5 2019-03-01 25 | 13 toolshed.g2.bx.psu.edu/repos/bgruening/trim_galore/trim_galore/0.4.3.1 2020-04-01 538 |
| 14 toolshed.g2.bx.psu.edu/repos/iuc/macs2/macs2_callpeak/2.1.1.20160309.5 2019-03-01 22 | 14 toolshed.g2.bx.psu.edu/repos/bgruening/deeptools_plot_heatmap/deeptools_plot_heatmap/3.3.2.0.1 2020-04-01 530 |
| 15 toolshed.g2.bx.psu.edu/repos/devteam/samtools_idxstats/samtools_idxstats/2.0.2 2019-03-01 21 | 15 toolshed.g2.bx.psu.edu/repos/bgruening/deeptools_compute_matrix/deeptools_compute_matrix/3.3.2.0.0 2020-04-01 475 |
| 16 toolshed.g2.bx.psu.edu/repos/lparsons/cutadapt/cutadapt/1.16.5 2019-03-01 19 | 16 Remove beginning1 2020-04-01 447 |
| 17 toolshed.g2.bx.psu.edu/repos/devteam/ncbi_blast_plus/ncbi_blastn_wrapper/0.3.1 2019-03-01 18 | 17 toolshed.g2.bx.psu.edu/repos/bgruening/text_processing/tp_sort_header_tool/1.1.1 2020-04-01 408 |
| 18 toolshed.g2.bx.psu.edu/repos/bgruening/deeptools_compute_matrix/deeptools_compute_matrix/3.0.2.0 2019-03-01 17 | 18 join1 2020-04-01 369 |
| 19 toolshed.g2.bx.psu.edu/repos/nilesh/rseqc/rseqc_infer_experiment/2.6.4.1 2019-03-01 17 | 19 toolshed.g2.bx.psu.edu/repos/iuc/hisat2/hisat2/2.1.0+galaxy5 2020-04-01 357 |
| 20 toolshed.g2.bx.psu.edu/repos/bgruening/deeptools_compute_gc_bias/deeptools_compute_gc_bias/3.0.2.0 2019-03-01 16 | 20 Convert characters1 2020-04-01 351 |
| 21 toolshed.g2.bx.psu.edu/repos/bgruening/deeptools_plot_fingerprint/deeptools_plot_fingerprint/3.0.2.0 2019-03-01 16 | 21 toolshed.g2.bx.psu.edu/repos/devteam/ncbi_blast_plus/ncbi_blastp_wrapper/0.3.3 2020-04-01 336 |
| 22 toolshed.g2.bx.psu.edu/repos/galaxyp/cardinal_classification/cardinal_classification/1.12.1.2 2019-03-01 16 | 22 toolshed.g2.bx.psu.edu/repos/lparsons/cutadapt/cutadapt/1.16.5 2020-04-01 316 |
| 23 toolshed.g2.bx.psu.edu/repos/iuc/hisat2/hisat2/2.1.0+galaxy4 2019-03-01 13 | 23 toolshed.g2.bx.psu.edu/repos/iuc/bedtools/bedtools_intersectbed/2.29.0 2020-04-01 313 |
| 24 toolshed.g2.bx.psu.edu/repos/iuc/flash/flash/1.2.11.3 2019-03-01 13 | 24 toolshed.g2.bx.psu.edu/repos/iuc/samtools_fastx/samtools_fastx/1.9+galaxy1 2020-04-01 311 |
| 25 toolshed.g2.bx.psu.edu/repos/bgruening/text_processing/tp_cut_tool/1.1.0 2019-03-01 13 | 25 toolshed.g2.bx.psu.edu/repos/iuc/fastp/fastp/0.19.5+galaxy1 2020-04-01 305 |
| 26 toolshed.g2.bx.psu.edu/repos/iuc/featurecounts/featurecounts/1.4.6.p5 2019-03-01 12 | 26 toolshed.g2.bx.psu.edu/repos/bgruening/deeptools_bam_coverage/deeptools_bam_coverage/3.3.2.0.0 2020-04-01 302 |
| 27 toolshed.g2.bx.psu.edu/repos/bgruening/deeptools_multi_bam_summary/deeptools_multi_bam_summary/3.0.2.0 2019-03-01 12 | 27 cat1 2020-04-01 299 |
| 28 toolshed.g2.bx.psu.edu/repos/galaxyp/cardinal_preprocessing/cardinal_preprocessing/1.12.1.2 2019-03-01 12 | 28 toolshed.g2.bx.psu.edu/repos/iuc/macs2/macs2_callpeak/2.1.1.20160309.6 2020-04-01 298 |
| 29 cat1 2019-03-01 11 | 29 addValue 2020-04-01 294 |
| 30 toolshed.g2.bx.psu.edu/repos/iuc/ngsutils_bam_filter/ngsutils_bam_filter/0.5.9 2019-03-01 11 | 30 toolshed.g2.bx.psu.edu/repos/devteam/column_maker/Add_a_column1/1.1.0 2020-04-01 276 |
| 31 toolshed.g2.bx.psu.edu/repos/iuc/datamash_ops/datamash_ops/1.1.0 2019-03-01 10 | 31 toolshed.g2.bx.psu.edu/repos/devteam/bwa/bwa_mem/0.7.17.1 2020-04-01 275 |
| 32 wig_to_bigWig 2019-03-01 10 | 32 toolshed.g2.bx.psu.edu/repos/devteam/fastq_to_fasta/cshl_fastq_to_fasta/1.0.2 2020-04-01 274 |
| 33 CONVERTER_interval_to_bed_0 2019-03-01 10 | 33 toolshed.g2.bx.psu.edu/repos/iuc/multiqc/multiqc/1.7.1 2020-04-01 274 |
| 34 toolshed.g2.bx.psu.edu/repos/iuc/goseq/goseq/1.34.0 2019-03-01 9 | 34 ebi_sra_main 2020-04-01 272 |
| 35 toolshed.g2.bx.psu.edu/repos/iuc/bedtools/bedtools_sortbed/2.27.1 2019-03-01 9 | 35 Grouping1 2020-04-01 237 |
| 36 toolshed.g2.bx.psu.edu/repos/bgruening/pileometh/pileometh/0.3.0.1 2019-03-01 9 | 36 toolshed.g2.bx.psu.edu/repos/devteam/picard/picard_MarkDuplicates/2.18.2.2 2020-04-01 236 |
| 37 toolshed.g2.bx.psu.edu/repos/iuc/deseq2/deseq2/2.11.40.6 2019-03-01 9 | 37 toolshed.g2.bx.psu.edu/repos/lparsons/htseq_count/htseq_count/0.9.1 2020-04-01 233 |
| 38 toolshed.g2.bx.psu.edu/repos/bgruening/hicexplorer_hicplottads/hicexplorer_hicplottads/2.1.4.0 2019-03-01 9 | 38 toolshed.g2.bx.psu.edu/repos/devteam/fastq_groomer/fastq_groomer/1.1.5 2020-04-01 220 |
| 39 toolshed.g2.bx.psu.edu/repos/peterjc/blast_rbh/blast_reciprocal_best_hits/0.1.11 2019-03-01 7 | 39 toolshed.g2.bx.psu.edu/repos/galaxyp/filter_by_fasta_ids/filter_by_fasta_ids/2.1 2020-04-01 219 |
| 40 toolshed.g2.bx.psu.edu/repos/bgruening/deeptools_plot_correlation/deeptools_plot_correlation/3.0.2.0 2019-03-01 7 | 40 toolshed.g2.bx.psu.edu/repos/iuc/sra_tools/fastq_dump/2.10.4+galaxy1 2020-04-01 218 |
| 41 toolshed.g2.bx.psu.edu/repos/bgruening/text_processing/tp_find_and_replace/1.1.1 2019-03-01 6 | 41 toolshed.g2.bx.psu.edu/repos/bgruening/sucos_max_score/sucos_max_score/0.2.1 2020-04-01 216 |
| 42 toolshed.g2.bx.psu.edu/repos/bgruening/deeptools_bam_coverage/deeptools_bam_coverage/3.0.1.0 2019-03-01 6 | 42 toolshed.g2.bx.psu.edu/repos/bgruening/text_processing/tp_cut_tool/1.1.0 2020-04-01 216 |
| 43 secure_hash_message_digest 2019-03-01 6 | 43 toolshed.g2.bx.psu.edu/repos/jjohnson/query_tabular/query_tabular/3.0.0 2020-04-01 209 |
| 44 CONVERTER_interval_to_bedstrict_0 2019-03-01 6 | 44 toolshed.g2.bx.psu.edu/repos/crs4/prokka/prokka/1.14.5 2020-04-01 204 |
| 45 toolshed.g2.bx.psu.edu/repos/iuc/gtftobed12/gtftobed12/357 2019-03-01 6 | 45 toolshed.g2.bx.psu.edu/repos/iuc/snippy/snippy/4.5.0 2020-04-01 187 |
| 46 CONVERTER_bedgraph_to_bigwig 2019-03-01 5 | 46 toolshed.g2.bx.psu.edu/repos/devteam/fastq_paired_end_joiner/fastq_paired_end_joiner/2.0.1.1+galaxy0 2020-04-01 185 |
| 47 toolshed.g2.bx.psu.edu/repos/devteam/concat/gops_concat_1/1.0.1 2019-03-01 5 | 47 CONVERTER_interval_to_bed_0 2020-04-01 182 |
| 48 toolshed.g2.bx.psu.edu/repos/bgruening/deeptools_plot_heatmap/deeptools_plot_heatmap/3.0.2.0 2019-03-01 5 | 48 toolshed.g2.bx.psu.edu/repos/nilesh/rseqc/rseqc_read_distribution/2.6.4.1 2020-04-01 178 |
| 49 toolshed.g2.bx.psu.edu/repos/devteam/fastqtofasta/fastq_to_fasta_python/1.1.1 2019-03-01 5 | 49 ucsc_table_direct1 2020-04-01 177 |
| 50 toolshed.g2.bx.psu.edu/repos/iuc/mothur_make_group/mothur_make_group/1.39.5.0 2019-03-01 5 | 50 toolshed.g2.bx.psu.edu/repos/iuc/deseq2/deseq2/2.11.40.6+galaxy1 2020-04-01 176 |
| 51 toolshed.g2.bx.psu.edu/repos/devteam/ncbi_blast_plus/ncbi_blastp_wrapper/0.3.1 2019-03-01 5 | 51 toolshed.g2.bx.psu.edu/repos/devteam/fastq_paired_end_deinterlacer/fastq_paired_end_deinterlacer/1.1.5 2020-04-01 175 |
| 52 toolshed.g2.bx.psu.edu/repos/devteam/ncbi_blast_plus/ncbi_makeblastdb/0.3.1 2019-03-01 4 | 52 toolshed.g2.bx.psu.edu/repos/bgruening/text_processing/tp_easyjoin_tool/1.1.1 2020-04-01 172 |
| 53 wc_gnu 2019-03-01 4 | 53 toolshed.g2.bx.psu.edu/repos/iuc/sra_tools/fastq_dump/2.10.4 2020-04-01 169 |
| 54 __SET_METADATA__ 2019-03-01 4 | 54 toolshed.g2.bx.psu.edu/repos/devteam/fastqtofasta/fastq_to_fasta_python/1.1.5 2020-04-01 167 |
| 55 toolshed.g2.bx.psu.edu/repos/iuc/unicycler/unicycler/0.4.7.0 2019-03-01 4 | 55 toolshed.g2.bx.psu.edu/repos/iuc/umi_tools_extract/umi_tools_extract/0.5.5.1 2020-04-01 159 |
| 56 toolshed.g2.bx.psu.edu/repos/galaxyp/cardinal_filtering/cardinal_filtering/1.12.1.2 2019-03-01 4 | 56 toolshed.g2.bx.psu.edu/repos/iuc/stringtie/stringtie/2.1.1 2020-04-01 156 |
| 57 toolshed.g2.bx.psu.edu/repos/iuc/bwameth/bwameth/0.2.0.4 2019-03-01 4 | 57 toolshed.g2.bx.psu.edu/repos/iuc/umi_tools_dedup/umi_tools_dedup/0.5.3.0 2020-04-01 150 |
| 58 toolshed.g2.bx.psu.edu/repos/iuc/bedtools/bedtools_intersectbed/2.27.0.1 2019-03-01 4 | 58 toolshed.g2.bx.psu.edu/repos/devteam/bwa/bwa/0.7.17.4 2020-04-01 147 |
| 59 toolshed.g2.bx.psu.edu/repos/iuc/collection_column_join/collection_column_join/0.0.1 2019-03-01 4 | 59 toolshed.g2.bx.psu.edu/repos/devteam/join/gops_join_1/1.0.0 2020-04-01 143 |
| 60 Filter1 2019-03-01 4 | 60 toolshed.g2.bx.psu.edu/repos/bgruening/deeptools_plot_profile/deeptools_plot_profile/3.3.2.0.0 2020-04-01 143 |
| 61 toolshed.g2.bx.psu.edu/repos/lparsons/fastq_join/fastq_join/1.1.2-806 2019-03-01 4 | 61 toolshed.g2.bx.psu.edu/repos/bgruening/split_file_to_collection/split_file_to_collection/0.4.0 2020-04-01 143 |
| 62 toolshed.g2.bx.psu.edu/repos/bgruening/deeptools_plot_profile/deeptools_plot_profile/3.1.2.0.0 2019-03-01 3 | 62 toolshed.g2.bx.psu.edu/repos/iuc/ngsutils_bam_filter/ngsutils_bam_filter/0.5.9 2020-04-01 142 |
| 63 toolshed.g2.bx.psu.edu/repos/devteam/column_maker/Add_a_column1/1.2.0 2019-03-01 3 | 63 toolshed.g2.bx.psu.edu/repos/bgruening/text_processing/tp_easyjoin_tool/1.1.2 2020-04-01 139 |
| 64 toolshed.g2.bx.psu.edu/repos/bgruening/graphicsmagick_image_convert/graphicsmagick_image_convert/1.3.31 2019-03-01 3 | 64 toolshed.g2.bx.psu.edu/repos/devteam/samtools_idxstats/samtools_idxstats/2.0.3 2020-04-01 136 |
| 65 toolshed.g2.bx.psu.edu/repos/iuc/sra_tools/sam_dump/2.9.1.4 2019-03-01 3 | 65 toolshed.g2.bx.psu.edu/repos/iuc/sra_tools/fasterq_dump/2.10.4+galaxy1 2020-04-01 134 |
| 66 toolshed.g2.bx.psu.edu/repos/devteam/fastq_filter/fastq_filter/1.1.1 2019-03-01 3 | 66 wig_to_bigWig 2020-04-01 121 |
| 67 toolshed.g2.bx.psu.edu/repos/iuc/volcanoplot/volcanoplot/0.0.2 2019-03-01 3 | 67 trimmer 2020-04-01 121 |
| 68 toolshed.g2.bx.psu.edu/repos/devteam/samtools_mpileup/samtools_mpileup/2.1.4 2019-03-01 3 | 68 toolshed.g2.bx.psu.edu/repos/galaxyp/regex_find_replace/regexColumn1/1.0.0 2020-04-01 120 |
| 69 toolshed.g2.bx.psu.edu/repos/bgruening/text_processing/tp_replace_in_column/1.1.3 2019-03-01 3 | 69 CONVERTER_fastq_to_fqtoc0 2020-04-01 117 |
| 70 toolshed.g2.bx.psu.edu/repos/imgteam/coordinates_of_roi/ip_coordinates_of_roi/0.0.3 2019-03-01 3 | 70 CONVERTER_bz2_to_uncompressed 2020-04-01 115 |
| 71 Grouping1 2019-03-01 3 | 71 toolshed.g2.bx.psu.edu/repos/iuc/bedtools/bedtools_intersectbed/2.27.0.1 2020-04-01 112 |
| 72 toolshed.g2.bx.psu.edu/repos/devteam/fastq_to_fasta/cshl_fastq_to_fasta/1.0.2 2019-03-01 3 | 72 toolshed.g2.bx.psu.edu/repos/iuc/meme_fimo/meme_fimo/5.0.5.0 2020-04-01 110 |
| 73 toolshed.g2.bx.psu.edu/repos/iuc/datamash_transpose/datamash_transpose/1.1.0 2019-03-01 2 | 73 toolshed.g2.bx.psu.edu/repos/devteam/ncbi_blast_plus/ncbi_blastn_wrapper/0.3.3 2020-04-01 110 |
| 74 toolshed.g2.bx.psu.edu/repos/bgruening/graphicsmagick_image_convert/graphicsmagick_image_convert/1.3.26 2019-03-01 2 | 74 toolshed.g2.bx.psu.edu/repos/devteam/tabular_to_fasta/tab2fasta/1.1.0 2020-04-01 107 |
| 75 toolshed.g2.bx.psu.edu/repos/galaxyp/filter_by_fasta_ids/filter_by_fasta_ids/2.1 2019-03-01 2 | 75 toolshed.g2.bx.psu.edu/repos/devteam/bamtools_filter/bamFilter/2.4.1 2020-04-01 105 |
| 76 toolshed.g2.bx.psu.edu/repos/iuc/bedtools/bedtools_closestbed/2.27.1 2019-03-01 2 | 76 toolshed.g2.bx.psu.edu/repos/devteam/samtools_stats/samtools_stats/2.0.2+galaxy2 2020-04-01 105 |
| 77 toolshed.g2.bx.psu.edu/repos/galaxyp/cardinal_combine/cardinal_combine/1.12.1.2 2019-03-01 2 | 77 toolshed.g2.bx.psu.edu/repos/nilesh/rseqc/rseqc_infer_experiment/2.6.4.1 2020-04-01 103 |
| 78 toolshed.g2.bx.psu.edu/repos/tgac/miranda/miranda/3.3a 2019-03-01 2 | 78 comp1 2020-04-01 102 |
| 79 toolshed.g2.bx.psu.edu/repos/iuc/bedtools/bedtools_mergebed/2.27.0.0 2019-03-01 2 | 79 toolshed.g2.bx.psu.edu/repos/devteam/column_maker/Add_a_column1/1.2.0 2020-04-01 101 |
| 80 toolshed.g2.bx.psu.edu/repos/bgruening/text_processing/tp_sort_header_tool/1.1.1 2019-03-01 2 | 80 toolshed.g2.bx.psu.edu/repos/bgruening/deeptools_bam_coverage/deeptools_bam_coverage/3.0.2.0 2020-04-01 98 |
| 81 toolshed.g2.bx.psu.edu/repos/bgruening/hicexplorer_hicplotmatrix/hicexplorer_hicplotmatrix/2.1.4.0 2019-03-01 2 | 81 toolshed.g2.bx.psu.edu/repos/devteam/samtools_flagstat/samtools_flagstat/2.0.3 2020-04-01 98 |
| 82 toolshed.g2.bx.psu.edu/repos/iuc/mothur_merge_files/mothur_merge_files/1.39.5.0 2019-03-01 2 | 82 toolshed.g2.bx.psu.edu/repos/iuc/ggplot2_heatmap2/ggplot2_heatmap2/3.0.1 2020-04-01 96 |
| 83 toolshed.g2.bx.psu.edu/repos/peterjc/seq_filter_by_id/seq_filter_by_id/0.2.7 2019-03-01 2 | 83 toolshed.g2.bx.psu.edu/repos/nilesh/rseqc/rseqc_geneBody_coverage/2.6.4.3 2020-04-01 94 |
| 84 toolshed.g2.bx.psu.edu/repos/devteam/bwa/bwa_mem/0.7.17.1 2019-03-01 2 | 84 toolshed.g2.bx.psu.edu/repos/iuc/snpeff/snpEff/4.3+T.galaxy1 2020-04-01 93 |
| 85 sklearn_ensemble 2019-03-01 2 | 85 toolshed.g2.bx.psu.edu/repos/bgruening/text_processing/tp_cat/0.1.0 2020-04-01 92 |
| 86 toolshed.g2.bx.psu.edu/repos/devteam/bowtie2/bowtie2/2.3.4.2 2019-03-01 2 | 86 toolshed.g2.bx.psu.edu/repos/bgruening/text_processing/tp_replace_in_line/1.1.2 2020-04-01 92 |
| 87 toolshed.g2.bx.psu.edu/repos/galaxyp/cardinal_quality_report/cardinal_quality_report/1.12.1.2 2019-03-01 2 | 87 toolshed.g2.bx.psu.edu/repos/devteam/samtool_filter2/samtool_filter2/1.8+galaxy1 2020-04-01 86 |
| 88 toolshed.g2.bx.psu.edu/repos/galaxyp/cardinal_segmentations/cardinal_segmentations/1.12.1.2 2019-03-01 2 | 88 toolshed.g2.bx.psu.edu/repos/devteam/fasta_to_tabular/fasta2tab/1.1.0 2020-04-01 86 |
| 89 ebi_sra_main 2019-03-01 2 | 89 toolshed.g2.bx.psu.edu/repos/iuc/unicycler/unicycler/0.4.8.0 2020-04-01 84 |
| 90 toolshed.g2.bx.psu.edu/repos/devteam/intersect/gops_intersect_1/1.0.0 2019-03-01 2 | 90 toolshed.g2.bx.psu.edu/repos/gbcs-embl-heidelberg/je_demultiplex/je_demultiplex/1.2.1 2020-04-01 82 |
| 91 join1 2019-03-01 2 | 91 toolshed.g2.bx.psu.edu/repos/devteam/samtools_rmdup/samtools_rmdup/2.0.1 2020-04-01 82 |
| 92 toolshed.g2.bx.psu.edu/repos/devteam/ncbi_blast_plus/ncbi_tblastn_wrapper/0.3.1 2019-03-01 2 | 92 toolshed.g2.bx.psu.edu/repos/galaxyp/peptideshaker/search_gui/3.3.10.1 2020-04-01 81 |
| 93 toolshed.g2.bx.psu.edu/repos/devteam/fasta_to_tabular/fasta2tab/1.1.0 2019-03-01 2 | 93 toolshed.g2.bx.psu.edu/repos/nml/collapse_collections/collapse_dataset/4.2 2020-04-01 79 |
| 94 sort1 2019-03-01 2 | 94 toolshed.g2.bx.psu.edu/repos/devteam/sam_merge/sam_merge2/1.2.0 2020-04-01 76 |
| 95 toolshed.g2.bx.psu.edu/repos/galaxyp/maldi_quant_peak_detection/maldi_quant_peak_detection/1.18.0.3 2019-03-01 2 | 95 toolshed.g2.bx.psu.edu/repos/iuc/samtools_view/samtools_view/1.9+galaxy1 2020-04-01 74 |
| 96 toolshed.g2.bx.psu.edu/repos/iuc/jbrowse/jbrowse/1.16.2+galaxy2 2019-03-01 1 | 96 toolshed.g2.bx.psu.edu/repos/iuc/gtftobed12/gtftobed12/357 2020-04-01 74 |
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