comparison test-data/test_workflows @ 0:9bf25dbe00ad draft

"planemo upload for repository https://github.com/bgruening/galaxytools/tree/recommendation_training/tools/tool_recommendation_model commit 7fac577189d01cedd01118a77fc2baaefe7d5cad"
author bgruening
date Wed, 28 Aug 2019 07:19:38 -0400
parents
children 76251d1ccdcc
comparison
equal deleted inserted replaced
-1:000000000000 0:9bf25dbe00ad
1 wf_id wf_updated in_id in_tool in_tool_v out_id out_tool out_tool_v
2 3 2013-02-07 16:48:00 7 Remove beginning1 1.0.0 5 Grep1 1.0.1
3 4 2013-02-07 16:48:00 16 wc_gnu 1.0.0 14 bedtools_intersectBed
4 4 2013-02-07 16:48:00 18 addValue 1.0.0 16 wc_gnu 1.0.0
5 4 2013-02-07 16:48:00 13 cat1 1.0.0 18 addValue 1.0.0
6 4 2013-02-07 16:48:00 21 cshl_uniq_tool 1.0.0 19 cshl_awk_tool
7 4 2013-02-07 16:48:00 13 cat1 1.0.0 20 Count1 1.0.0
8 4 2013-02-07 16:48:00 20 Count1 1.0.0 21 cshl_uniq_tool 1.0.0
9 4 2013-02-07 16:48:00 14 bedtools_intersectBed 23
10 4 2013-02-07 16:48:00 14 bedtools_intersectBed 24
11 5 2013-02-07 16:49:00 26 cat1 1.0.0 25 addValue 1.0.0
12 5 2013-02-07 16:49:00 59 Paste1 1.0.0 27 Cut1 1.0.1
13 5 2013-02-07 16:49:00 59 Paste1 1.0.0 28 Cut1 1.0.1
14 5 2013-02-07 16:49:00 66 Paste1 1.0.0 29 Cut1 1.0.1
15 5 2013-02-07 16:49:00 66 Paste1 1.0.0 30 Cut1 1.0.1
16 5 2013-02-07 16:49:00 36 Paste1 1.0.0 31 Cut1 1.0.1
17 5 2013-02-07 16:49:00 36 Paste1 1.0.0 32 Cut1 1.0.1
18 5 2013-02-07 16:49:00 60 Paste1 1.0.0 33 Cut1 1.0.1
19 5 2013-02-07 16:49:00 60 Paste1 1.0.0 34 Cut1 1.0.1
20 5 2013-02-07 16:49:00 64 Add_a_column1 1.1.0 36 Paste1 1.0.0
21 5 2013-02-07 16:49:00 26 cat1 1.0.0 37 addValue 1.0.0
22 5 2013-02-07 16:49:00 26 cat1 1.0.0 38 addValue 1.0.0
23 5 2013-02-07 16:49:00 39 Filter1 1.1.0 40 gops_coverage_1 1.0.0
24 5 2013-02-07 16:49:00 51 Summary_Statistics1 1.1.0 41 cshl_grep_tool 1.0.0
25 5 2013-02-07 16:49:00 52 Summary_Statistics1 1.1.0 41 cshl_grep_tool 1.0.0
26 5 2013-02-07 16:49:00 49 Summary_Statistics1 1.1.0 42 Filter1 1.1.0
27 5 2013-02-07 16:49:00 50 Summary_Statistics1 1.1.0 42 Filter1 1.1.0
28 5 2013-02-07 16:49:00 55 Summary_Statistics1 1.1.0 43 Filter1 1.1.0
29 5 2013-02-07 16:49:00 54 Summary_Statistics1 1.1.0 44 Filter1 1.1.0
30 5 2013-02-07 16:49:00 57 Cut1 1.0.1 45 Summary_Statistics1 1.1.0
31 5 2013-02-07 16:49:00 26 cat1 1.0.0 47 addValue 1.0.0
32 5 2013-02-07 16:49:00 26 cat1 1.0.0 48 addValue 1.0.0
33 5 2013-02-07 16:49:00 31 Cut1 1.0.1 50 Summary_Statistics1 1.1.0
34 5 2013-02-07 16:49:00 34 Cut1 1.0.1 51 Summary_Statistics1 1.1.0
35 5 2013-02-07 16:49:00 33 Cut1 1.0.1 52 Summary_Statistics1 1.1.0
36 5 2013-02-07 16:49:00 28 Cut1 1.0.1 53 Summary_Statistics1 1.1.0
37 5 2013-02-07 16:49:00 27 Cut1 1.0.1 54 Summary_Statistics1 1.1.0
38 5 2013-02-07 16:49:00 30 Cut1 1.0.1 55 Summary_Statistics1 1.1.0
39 5 2013-02-07 16:49:00 29 Cut1 1.0.1 56 Summary_Statistics1 1.1.0
40 5 2013-02-07 16:49:00 35 Paste1 1.0.0 57 Cut1 1.0.1
41 5 2013-02-07 16:49:00 35 Paste1 1.0.0 58 Cut1 1.0.1
42 5 2013-02-07 16:49:00 62 Add_a_column1 1.1.0 59 Paste1 1.0.0
43 5 2013-02-07 16:49:00 63 Add_a_column1 1.1.0 60 Paste1 1.0.0
44 5 2013-02-07 16:49:00 38 addValue 1.0.0 62 Add_a_column1 1.1.0
45 5 2013-02-07 16:49:00 37 addValue 1.0.0 63 Add_a_column1 1.1.0
46 5 2013-02-07 16:49:00 47 addValue 1.0.0 64 Add_a_column1 1.1.0
47 5 2013-02-07 16:49:00 40 gops_coverage_1 1.0.0 68
48 5 2013-02-07 16:49:00 40 gops_coverage_1 1.0.0 69
49 6 2013-02-07 16:57:00 70 cshl_awk_tool1 1.0.0 71
50 9 2013-02-07 16:59:00 84 Remove beginning1 1.0.0 82 Grep1 1.0.1
51 9 2013-02-07 16:59:00 88 Paste1 1.0.0 85 addValue 1.0.0
52 9 2013-02-07 16:59:00 88 Paste1 1.0.0 86 Cut1 1.0.1
53 9 2013-02-07 16:59:00 82 Grep1 1.0.1 89
54 11 2013-02-07 17:03:00 145 barchart_gnuplot 1.0.0 136 cat1 1.0.0
55 11 2013-02-07 17:03:00 170 Paste1 1.0.0 137 Cut1 1.0.1
56 11 2013-02-07 17:03:00 170 Paste1 1.0.0 138 Cut1 1.0.1
57 11 2013-02-07 17:03:00 177 Paste1 1.0.0 139 Cut1 1.0.1
58 11 2013-02-07 17:03:00 177 Paste1 1.0.0 140 Cut1 1.0.1
59 11 2013-02-07 17:03:00 171 Paste1 1.0.0 143 Cut1 1.0.1
60 11 2013-02-07 17:03:00 171 Paste1 1.0.0 144 Cut1 1.0.1
61 11 2013-02-07 17:03:00 176 Add_a_column1 1.1.0 146 Paste1 1.0.0
62 11 2013-02-07 17:03:00 175 Add_a_column1 1.1.0 147 Paste1 1.0.0
63 11 2013-02-07 17:03:00 156 Summary_Statistics1 1.1.0 150 Filter1 1.1.0
64 11 2013-02-07 17:03:00 157 Summary_Statistics1 1.1.0 150 Filter1 1.1.0
65 11 2013-02-07 17:03:00 155 Filter1 1.1.0 151 gops_coverage_1 1.0.0
66 11 2013-02-07 17:03:00 162 Summary_Statistics1 1.1.0 152 cshl_grep_tool 1.0.0
67 11 2013-02-07 17:03:00 163 Summary_Statistics1 1.1.0 152 cshl_grep_tool 1.0.0
68 11 2013-02-07 17:03:00 160 Summary_Statistics1 1.1.0 153 Filter1 1.1.0
69 11 2013-02-07 17:03:00 161 Summary_Statistics1 1.1.0 153 Filter1 1.1.0
70 11 2013-02-07 17:03:00 168 Cut1 1.0.1 156 Summary_Statistics1 1.1.0
71 11 2013-02-07 17:03:00 141 Cut1 1.0.1 161 Summary_Statistics1 1.1.0
72 11 2013-02-07 17:03:00 144 Cut1 1.0.1 162 Summary_Statistics1 1.1.0
73 11 2013-02-07 17:03:00 137 Cut1 1.0.1 165 Summary_Statistics1 1.1.0
74 11 2013-02-07 17:03:00 146 Paste1 1.0.0 168 Cut1 1.0.1
75 11 2013-02-07 17:03:00 146 Paste1 1.0.0 169 Cut1 1.0.1
76 11 2013-02-07 17:03:00 173 Add_a_column1 1.1.0 170 Paste1 1.0.0
77 11 2013-02-07 17:03:00 174 Add_a_column1 1.1.0 171 Paste1 1.0.0
78 11 2013-02-07 17:03:00 149 addValue 1.0.0 173 Add_a_column1 1.1.0
79 11 2013-02-07 17:03:00 148 addValue 1.0.0 174 Add_a_column1 1.1.0
80 11 2013-02-07 17:03:00 158 addValue 1.0.0 175 Add_a_column1 1.1.0
81 12 2013-02-07 17:04:00 185 addValue 1.0.0 183 wc_gnu 1.0.0
82 12 2013-02-07 17:04:00 186 cshl_awk_tool 184 sort1 1.0.1
83 12 2013-02-07 17:04:00 180 cat1 1.0.0 185 addValue 1.0.0
84 12 2013-02-07 17:04:00 188 cshl_uniq_tool 1.0.0 186 cshl_awk_tool
85 12 2013-02-07 17:04:00 180 cat1 1.0.0 187 Count1 1.0.0
86 12 2013-02-07 17:04:00 187 Count1 1.0.0 188 cshl_uniq_tool 1.0.0
87 12 2013-02-07 17:04:00 181 bedtools_intersectBed 190
88 12 2013-02-07 17:04:00 182 bedtools_intersectBed 190
89 12 2013-02-07 17:04:00 181 bedtools_intersectBed 191
90 12 2013-02-07 17:04:00 182 bedtools_intersectBed 191
91 19 2013-02-14 15:51:00 194 toolshed.g2.bx.psu.edu/repos/ryo-tas/macs14/peakcalling_macs14/1.4.1 193
92 19 2013-02-14 15:51:00 194 toolshed.g2.bx.psu.edu/repos/ryo-tas/macs14/peakcalling_macs14/1.4.1 195
93 19 2013-02-14 15:51:00 200 gops_intersect_1 1.0.0 199
94 19 2013-02-14 15:51:00 200 gops_intersect_1 1.0.0 201 cshl_find_and_replace 1.0.0
95 19 2013-02-14 15:51:00 201 cshl_find_and_replace 1.0.0 202 get_flanks1 1.0.0
96 19 2013-02-14 15:51:00 207 Extract genomic DNA 1 2.2.2 206 cshl_awk_tool
97 19 2013-02-14 15:51:00 207 Extract genomic DNA 1 2.2.2 208
98 19 2013-02-14 15:51:00 209 Extract genomic DNA 1 2.2.2 208
99 19 2013-02-14 15:51:00 213 trap 208
100 19 2013-02-14 15:51:00 209 Extract genomic DNA 1 2.2.2 210 cshl_awk_tool
101 19 2013-02-14 15:51:00 216 barchart_gnuplot 1.0.0 215 Count1 1.0.0
102 28 2013-02-14 16:08:00 243 toolshed.g2.bx.psu.edu/repos/ryo-tas/macs14/peakcalling_macs14/1.4.1 1.4.1 242
103 28 2013-02-14 16:08:00 243 toolshed.g2.bx.psu.edu/repos/ryo-tas/macs14/peakcalling_macs14/1.4.1 1.4.1 244
104 29 2013-02-14 17:12:00 257 gops_subtract_1 1.0.0 251
105 29 2013-02-14 17:12:00 262 cshl_awk_tool 252 gops_intersect_1 1.0.0
106 29 2013-02-14 17:12:00 257 gops_subtract_1 1.0.0 253 cshl_find_and_replace 1.0.0
107 29 2013-02-14 17:12:00 254 get_flanks1 1.0.0 255
108 29 2013-02-14 17:12:00 256 cshl_grep_tool 1.0.0 255
109 29 2013-02-14 17:12:00 266 Show beginning1 1.0.0 259 Extract genomic DNA 1 2.2.2
110 29 2013-02-14 17:12:00 265 trap 260
111 29 2013-02-14 17:12:00 263 Show beginning1 1.0.0 261 Extract genomic DNA 1 2.2.2
112 29 2013-02-14 17:12:00 264 meme_meme 1.0.0 263 Show beginning1 1.0.0
113 31 2013-02-18 11:33:00 275 addValue 1.0.0 274
114 31 2013-02-18 11:33:00 276 mergeCols1 1.0.1 275 addValue 1.0.0
115 33 2013-02-16 18:11:00 284 gops_intersect_1 1.0.0 283
116 33 2013-02-16 18:11:00 284 gops_intersect_1 1.0.0 285
117 33 2013-02-16 18:11:00 287 barchart_gnuplot 1.0.0 286 Count1 1.0.0
118 34 2013-02-18 11:26:00 289 cshl_awk_tool 1.0.0 288
119 36 2013-02-18 11:32:00 292 cshl_awk_tool 1.0.0 293
120 38 2013-02-18 15:28:00 298 barchart_gnuplot 297 Count1
121 39 2013-02-18 15:29:00 302 Count1 301 gops_intersect_1
122 39 2013-02-18 15:29:00 303 barchart_gnuplot 302 Count1
123 41 2013-02-18 15:36:00 310 gops_intersect_1 1.0.0 309
124 41 2013-02-18 15:36:00 312 Count1 1.0.0 310 gops_intersect_1 1.0.0
125 41 2013-02-18 15:36:00 310 gops_intersect_1 1.0.0 311
126 41 2013-02-18 15:36:00 313 barchart_gnuplot 1.0.0 312 Count1 1.0.0
127 51 2013-02-18 16:17:00 345 barchart_gnuplot 344 Count1
128 62 2013-02-18 16:20:00 396 Count1 1.0.0 395
129 64 2013-02-18 16:19:00 402 Count1 1.0.0 401
130 68 2013-02-18 16:19:00 414 Count1 1.0.0 413
131 68 2013-02-18 16:19:00 415 barchart_gnuplot 1.0.0 414 Count1 1.0.0
132 69 2013-02-18 16:19:00 417 Count1 1.0.0 416
133 69 2013-02-18 16:19:00 418 barchart_gnuplot 1.0.0 417 Count1 1.0.0
134 70 2013-02-18 16:20:00 420 Count1 1.0.0 419
135 70 2013-02-18 16:20:00 421 barchart_gnuplot 1.0.0 420 Count1 1.0.0
136 72 2013-02-18 16:20:00 426 Count1 1.0.0 425
137 73 2013-02-18 16:20:00 429 Count1 1.0.0 428
138 73 2013-02-18 16:20:00 430 barchart_gnuplot 1.0.0 429 Count1 1.0.0
139 76 2013-02-18 16:20:00 440 barchart_gnuplot 1.0.0 439 Count1 1.0.0
140 77 2013-02-18 16:21:00 443 Count1 1.0.0 442
141 77 2013-02-18 16:21:00 444 barchart_gnuplot 1.0.0 443 Count1 1.0.0
142 78 2013-02-18 16:21:00 446 Count1 1.0.0 445
143 78 2013-02-18 16:21:00 447 barchart_gnuplot 1.0.0 446 Count1 1.0.0
144 81 2013-02-18 16:22:00 466 addValue 1.0.0 465
145 81 2013-02-18 16:22:00 468 Cut1 1.0.1 467 mergeCols1 1.0.1
146 81 2013-02-18 16:22:00 474 barchart_gnuplot 1.0.0 473 Count1 1.0.0
147 82 2013-02-18 16:22:00 477 addValue 1.0.0 476 CONVERTER_interval_to_bedstrict_0 1.0.0
148 82 2013-02-18 16:22:00 478 mergeCols1 1.0.1 477 addValue 1.0.0
149 82 2013-02-18 16:22:00 483 gops_intersect_1 1.0.0 482 get_flanks1 1.0.0
150 82 2013-02-18 16:22:00 483 gops_intersect_1 1.0.0 484 cshl_find_and_replace 1.0.0
151 82 2013-02-18 16:22:00 485 CONVERTER_interval_to_bed_0 1.0.0 484 cshl_find_and_replace 1.0.0
152 82 2013-02-18 16:22:00 488 barchart_gnuplot 1.0.0 487 Count1 1.0.0
153 83 2013-02-18 19:10:00 492 Count1 1.0.0 490 gops_intersect_1 1.0.0
154 86 2013-02-19 12:08:00 505 gops_intersect_1 1.0.0 504
155 86 2013-02-19 12:08:00 505 gops_intersect_1 1.0.0 506
156 86 2013-02-19 12:08:00 508 barchart_gnuplot 1.0.0 507 Count1 1.0.0
157 95 2013-02-20 10:03:00 672 gops_intersect_1 1.0.0 671
158 95 2013-02-20 10:03:00 672 gops_intersect_1 1.0.0 673
159 97 2013-02-20 10:11:00 701 toolshed.g2.bx.psu.edu/repos/ryo-tas/macs14/peakcalling_macs14/1.4.1 1.4.1 700
160 97 2013-02-20 10:11:00 701 toolshed.g2.bx.psu.edu/repos/ryo-tas/macs14/peakcalling_macs14/1.4.1 1.4.1 702
161 97 2013-02-20 10:11:00 708 gops_intersect_1 1.0.0 703 cshl_awk_tool 1.0.0
162 97 2013-02-20 10:11:00 711 Extract genomic DNA 1 2.2.2 704 gops_subtract_1 1.0.0
163 97 2013-02-20 10:11:00 708 gops_intersect_1 1.0.0 705 cshl_awk_tool 1.0.0
164 97 2013-02-20 10:11:00 706 get_flanks1 1.0.0 707
165 97 2013-02-20 10:11:00 711 Extract genomic DNA 1 2.2.2 710
166 97 2013-02-20 10:11:00 714 tab2fasta 1.1.0 713 Show beginning1 1.0.0
167 97 2013-02-20 10:11:00 715 meme_meme 1.0.0 714 tab2fasta 1.1.0
168 97 2013-02-20 10:11:00 717 Show beginning1 1.0.0 716 fasta2tab 1.1.0
169 97 2013-02-20 10:11:00 718 tab2fasta 1.1.0 717 Show beginning1 1.0.0
170 97 2013-02-20 10:11:00 721 barchart_gnuplot 1.0.0 720 Count1 1.0.0
171 98 2013-02-20 10:44:00 726 mergeCols1 1.0.1 725 addValue 1.0.0
172 100 2013-02-20 11:16:00 733 addValue 1.0.0 732
173 100 2013-02-20 11:16:00 734 mergeCols1 1.0.1 733 addValue 1.0.0
174 100 2013-02-20 11:16:00 735 Cut1 1.0.1 734 mergeCols1 1.0.1
175 101 2013-02-20 14:16:00 737 addValue 1.0.0 736
176 103 2013-02-20 15:32:00 741 toolshed.g2.bx.psu.edu/repos/ryo-tas/macs14/peakcalling_macs14/1.4.1 740
177 103 2013-02-20 15:32:00 743 cshl_awk_tool 741 toolshed.g2.bx.psu.edu/repos/ryo-tas/macs14/peakcalling_macs14/1.4.1
178 103 2013-02-20 15:32:00 741 toolshed.g2.bx.psu.edu/repos/ryo-tas/macs14/peakcalling_macs14/1.4.1 742
179 103 2013-02-20 15:32:00 760 Extract genomic DNA 1 754 gops_intersect_1
180 103 2013-02-20 15:32:00 755 get_flanks1 756
181 103 2013-02-20 15:32:00 760 Extract genomic DNA 1 761
182 106 2013-02-20 15:46:00 810 toolshed.g2.bx.psu.edu/repos/ryo-tas/macs14/peakcalling_macs14/1.4.1 1.4.1 811
183 106 2013-02-20 15:46:00 810 toolshed.g2.bx.psu.edu/repos/ryo-tas/macs14/peakcalling_macs14/1.4.1 1.4.1 812
184 106 2013-02-20 15:46:00 822 Extract genomic DNA 1 2.2.2 814 gops_subtract_1 1.0.0
185 106 2013-02-20 15:46:00 823 Count1 1.0.0 814 gops_subtract_1 1.0.0
186 106 2013-02-20 15:46:00 824 fasta2tab 1.1.0 819 Extract genomic DNA 1 2.2.2
187 106 2013-02-20 15:46:00 822 Extract genomic DNA 1 2.2.2 820
188 106 2013-02-20 15:46:00 825 barchart_gnuplot 1.0.0 821 Count1 1.0.0
189 106 2013-02-20 15:46:00 826 fasta2tab 1.1.0 822 Extract genomic DNA 1 2.2.2
190 106 2013-02-20 15:46:00 827 barchart_gnuplot 1.0.0 823 Count1 1.0.0
191 106 2013-02-20 15:46:00 828 Show beginning1 1.0.0 826 fasta2tab 1.1.0
192 106 2013-02-20 15:46:00 830 meme_meme 1.0.0 829 tab2fasta 1.1.0
193 106 2013-02-20 15:46:00 833 meme_meme 1.0.0 832 tab2fasta 1.1.0
194 109 2013-02-20 15:49:00 879 toolshed.g2.bx.psu.edu/repos/ryo-tas/macs14/peakcalling_macs14/1.4.1 878
195 109 2013-02-20 15:49:00 879 toolshed.g2.bx.psu.edu/repos/ryo-tas/macs14/peakcalling_macs14/1.4.1 880
196 109 2013-02-20 15:49:00 887 gops_subtract_1 883
197 109 2013-02-20 15:49:00 887 gops_subtract_1 885 get_flanks1
198 109 2013-02-20 15:49:00 891 Show beginning1 890 fasta2tab
199 109 2013-02-20 15:49:00 892 tab2fasta 891 Show beginning1
200 109 2013-02-20 15:49:00 893 meme_meme 892 tab2fasta
201 110 2013-02-20 15:54:00 897 cshl_awk_tool 1.0.0 895 toolshed.g2.bx.psu.edu/repos/ryo-tas/macs14/peakcalling_macs14/1.4.1 1.4.1
202 110 2013-02-20 15:54:00 901 gops_subtract_1 1.0.0 900
203 110 2013-02-20 15:54:00 901 gops_subtract_1 1.0.0 902 get_flanks1 1.0.0
204 110 2013-02-20 15:54:00 902 get_flanks1 1.0.0 903
205 110 2013-02-20 15:54:00 905 Extract genomic DNA 1 2.2.2 904 gops_intersect_1 1.0.0
206 110 2013-02-20 15:54:00 911 Count1 1.0.0 904 gops_intersect_1 1.0.0
207 110 2013-02-20 15:54:00 907 fasta2tab 1.1.0 905 Extract genomic DNA 1 2.2.2
208 110 2013-02-20 15:54:00 905 Extract genomic DNA 1 2.2.2 906
209 110 2013-02-20 15:54:00 909 tab2fasta 1.1.0 908 Show beginning1 1.0.0
210 110 2013-02-20 15:54:00 910 meme_meme 1.0.0 909 tab2fasta 1.1.0
211 110 2013-02-20 15:54:00 912 barchart_gnuplot 1.0.0 911 Count1 1.0.0
212 110 2013-02-20 15:54:00 914 barchart_gnuplot 1.0.0 913 Count1 1.0.0
213 111 2013-02-20 15:51:00 926 gops_subtract_1 922
214 111 2013-02-20 15:51:00 933 Count1 923 gops_intersect_1
215 111 2013-02-20 15:51:00 926 gops_subtract_1 924 get_flanks1
216 111 2013-02-20 15:51:00 929 fasta2tab 927 Extract genomic DNA 1
217 111 2013-02-20 15:51:00 930 Show beginning1 929 fasta2tab
218 112 2013-02-20 15:51:00 944 get_flanks1 945
219 112 2013-02-20 15:51:00 946 get_flanks1 945
220 112 2013-02-20 15:51:00 953 Count1 947 gops_intersect_1
221 112 2013-02-20 15:51:00 954 Extract genomic DNA 1 947 gops_intersect_1
222 112 2013-02-20 15:51:00 952 barchart_gnuplot 951 Count1
223 112 2013-02-20 15:51:00 956 fasta2tab 954 Extract genomic DNA 1
224 112 2013-02-20 15:51:00 954 Extract genomic DNA 1 955
225 112 2013-02-20 15:51:00 957 Show beginning1 956 fasta2tab
226 112 2013-02-20 15:51:00 958 tab2fasta 957 Show beginning1
227 113 2013-02-20 15:52:00 964 cshl_awk_tool 961 toolshed.g2.bx.psu.edu/repos/ryo-tas/macs14/peakcalling_macs14/1.4.1
228 113 2013-02-20 15:52:00 968 gops_intersect_1 967
229 113 2013-02-20 15:52:00 971 gops_subtract_1 967
230 113 2013-02-20 15:52:00 968 gops_intersect_1 969 get_flanks1
231 113 2013-02-20 15:52:00 971 gops_subtract_1 969 get_flanks1
232 113 2013-02-20 15:52:00 969 get_flanks1 970
233 113 2013-02-20 15:52:00 979 fasta2tab 977 Extract genomic DNA 1
234 114 2013-02-20 15:58:00 985 toolshed.g2.bx.psu.edu/repos/ryo-tas/macs14/peakcalling_macs14/1.4.1 984
235 114 2013-02-20 15:58:00 987 cshl_awk_tool 985 toolshed.g2.bx.psu.edu/repos/ryo-tas/macs14/peakcalling_macs14/1.4.1
236 114 2013-02-20 15:58:00 985 toolshed.g2.bx.psu.edu/repos/ryo-tas/macs14/peakcalling_macs14/1.4.1 986
237 114 2013-02-20 15:58:00 991 gops_intersect_1 990
238 114 2013-02-20 15:58:00 995 gops_subtract_1 990
239 114 2013-02-20 15:58:00 998 Extract genomic DNA 1 991 gops_intersect_1
240 114 2013-02-20 15:58:00 991 gops_intersect_1 992 get_flanks1
241 114 2013-02-20 15:58:00 995 gops_subtract_1 992 get_flanks1
242 114 2013-02-20 15:58:00 997 barchart_gnuplot 996 Count1
243 114 2013-02-20 15:58:00 1000 fasta2tab 998 Extract genomic DNA 1
244 114 2013-02-20 15:58:00 998 Extract genomic DNA 1 999
245 114 2013-02-20 15:58:00 1001 Show beginning1 1000 fasta2tab
246 114 2013-02-20 15:58:00 1002 tab2fasta 1001 Show beginning1
247 115 2013-02-20 16:00:00 1006 toolshed.g2.bx.psu.edu/repos/ryo-tas/macs14/peakcalling_macs14/1.4.1 1.4.1 1005
248 115 2013-02-20 16:00:00 1006 toolshed.g2.bx.psu.edu/repos/ryo-tas/macs14/peakcalling_macs14/1.4.1 1.4.1 1007
249 115 2013-02-20 16:00:00 1009 gops_subtract_1 1.0.0 1008 cshl_awk_tool 1.0.0
250 115 2013-02-20 16:00:00 1027 Count1 1.0.0 1009 gops_subtract_1 1.0.0
251 115 2013-02-20 16:00:00 1009 gops_subtract_1 1.0.0 1010 cshl_awk_tool 1.0.0
252 115 2013-02-20 16:00:00 1011 get_flanks1 1.0.0 1012
253 115 2013-02-20 16:00:00 1025 Count1 1.0.0 1013 gops_intersect_1 1.0.0
254 115 2013-02-20 16:00:00 1021 fasta2tab 1.1.0 1014 Extract genomic DNA 1 2.2.2
255 115 2013-02-20 16:00:00 1017 fasta2tab 1.1.0 1016 Extract genomic DNA 1 2.2.2
256 115 2013-02-20 16:00:00 1019 tab2fasta 1.1.0 1018 Show beginning1 1.0.0
257 115 2013-02-20 16:00:00 1024 meme_meme 1.0.0 1023 tab2fasta 1.1.0
258 116 2013-02-20 16:00:00 1033 gops_subtract_1 1.0.0 1032 cshl_awk_tool 1.0.0
259 116 2013-02-20 16:00:00 1037 gops_intersect_1 1.0.0 1032 cshl_awk_tool 1.0.0
260 116 2013-02-20 16:00:00 1040 Extract genomic DNA 1 2.2.2 1033 gops_subtract_1 1.0.0
261 116 2013-02-20 16:00:00 1051 Count1 1.0.0 1033 gops_subtract_1 1.0.0
262 116 2013-02-20 16:00:00 1033 gops_subtract_1 1.0.0 1034 cshl_awk_tool 1.0.0
263 116 2013-02-20 16:00:00 1037 gops_intersect_1 1.0.0 1034 cshl_awk_tool 1.0.0
264 116 2013-02-20 16:00:00 1034 cshl_awk_tool 1.0.0 1035 get_flanks1 1.0.0
265 116 2013-02-20 16:00:00 1035 get_flanks1 1.0.0 1036
266 116 2013-02-20 16:00:00 1040 Extract genomic DNA 1 2.2.2 1039
267 116 2013-02-20 16:00:00 1041 fasta2tab 1.1.0 1040 Extract genomic DNA 1 2.2.2
268 116 2013-02-20 16:00:00 1044 meme_meme 1.0.0 1043 tab2fasta 1.1.0
269 116 2013-02-20 16:00:00 1050 barchart_gnuplot 1.0.0 1049 Count1 1.0.0
270 117 2013-02-20 16:00:00 1054 toolshed.g2.bx.psu.edu/repos/ryo-tas/macs14/peakcalling_macs14/1.4.1 1.4.1 1053
271 117 2013-02-20 16:00:00 1056 cshl_awk_tool 1.0.0 1054 toolshed.g2.bx.psu.edu/repos/ryo-tas/macs14/peakcalling_macs14/1.4.1 1.4.1
272 117 2013-02-20 16:00:00 1054 toolshed.g2.bx.psu.edu/repos/ryo-tas/macs14/peakcalling_macs14/1.4.1 1.4.1 1055
273 117 2013-02-20 16:00:00 1064 Extract genomic DNA 1 2.2.2 1057 gops_subtract_1 1.0.0
274 117 2013-02-20 16:00:00 1073 Count1 1.0.0 1061 gops_intersect_1 1.0.0
275 117 2013-02-20 16:00:00 1064 Extract genomic DNA 1 2.2.2 1063
276 117 2013-02-20 16:00:00 1067 tab2fasta 1.1.0 1066 Show beginning1 1.0.0
277 117 2013-02-20 16:00:00 1070 Show beginning1 1.0.0 1069 fasta2tab 1.1.0
278 117 2013-02-20 16:00:00 1076 barchart_gnuplot 1.0.0 1075 Count1 1.0.0
279 118 2013-02-20 16:00:00 1078 toolshed.g2.bx.psu.edu/repos/ryo-tas/macs14/peakcalling_macs14/1.4.1 1.4.1 1077
280 118 2013-02-20 16:00:00 1080 cshl_awk_tool 1.0.0 1078 toolshed.g2.bx.psu.edu/repos/ryo-tas/macs14/peakcalling_macs14/1.4.1 1.4.1
281 118 2013-02-20 16:00:00 1078 toolshed.g2.bx.psu.edu/repos/ryo-tas/macs14/peakcalling_macs14/1.4.1 1.4.1 1079
282 118 2013-02-20 16:00:00 1081 gops_subtract_1 1.0.0 1080 cshl_awk_tool 1.0.0
283 118 2013-02-20 16:00:00 1085 gops_intersect_1 1.0.0 1080 cshl_awk_tool 1.0.0
284 118 2013-02-20 16:00:00 1088 Extract genomic DNA 1 2.2.2 1081 gops_subtract_1 1.0.0
285 118 2013-02-20 16:00:00 1081 gops_subtract_1 1.0.0 1082 cshl_awk_tool 1.0.0
286 118 2013-02-20 16:00:00 1085 gops_intersect_1 1.0.0 1082 cshl_awk_tool 1.0.0
287 118 2013-02-20 16:00:00 1082 cshl_awk_tool 1.0.0 1083 get_flanks1 1.0.0
288 118 2013-02-20 16:00:00 1083 get_flanks1 1.0.0 1084
289 118 2013-02-20 16:00:00 1086 Extract genomic DNA 1 2.2.2 1085 gops_intersect_1 1.0.0
290 118 2013-02-20 16:00:00 1086 Extract genomic DNA 1 2.2.2 1087
291 118 2013-02-20 16:00:00 1088 Extract genomic DNA 1 2.2.2 1087
292 118 2013-02-20 16:00:00 1090 Show beginning1 1.0.0 1089 fasta2tab 1.1.0
293 118 2013-02-20 16:00:00 1094 Show beginning1 1.0.0 1093 fasta2tab 1.1.0
294 118 2013-02-20 16:00:00 1095 tab2fasta 1.1.0 1094 Show beginning1 1.0.0
295 118 2013-02-20 16:00:00 1096 meme_meme 1.0.0 1095 tab2fasta 1.1.0
296 118 2013-02-20 16:00:00 1098 barchart_gnuplot 1.0.0 1097 Count1 1.0.0
297 118 2013-02-20 16:00:00 1100 barchart_gnuplot 1.0.0 1099 Count1 1.0.0
298 119 2013-02-20 16:01:00 1104 cshl_awk_tool 1.0.0 1102 toolshed.g2.bx.psu.edu/repos/ryo-tas/macs14/peakcalling_macs14/1.4.1 1.4.1
299 119 2013-02-20 16:01:00 1109 gops_intersect_1 1.0.0 1104 cshl_awk_tool 1.0.0
300 119 2013-02-20 16:01:00 1123 Count1 1.0.0 1105 gops_subtract_1 1.0.0
301 119 2013-02-20 16:01:00 1109 gops_intersect_1 1.0.0 1106 cshl_awk_tool 1.0.0
302 119 2013-02-20 16:01:00 1106 cshl_awk_tool 1.0.0 1107 get_flanks1 1.0.0
303 119 2013-02-20 16:01:00 1107 get_flanks1 1.0.0 1108
304 119 2013-02-20 16:01:00 1110 Extract genomic DNA 1 2.2.2 1109 gops_intersect_1 1.0.0
305 119 2013-02-20 16:01:00 1121 Count1 1.0.0 1109 gops_intersect_1 1.0.0
306 119 2013-02-20 16:01:00 1110 Extract genomic DNA 1 2.2.2 1111
307 119 2013-02-20 16:01:00 1113 fasta2tab 1.1.0 1112 Extract genomic DNA 1 2.2.2
308 119 2013-02-20 16:01:00 1114 Show beginning1 1.0.0 1113 fasta2tab 1.1.0
309 119 2013-02-20 16:01:00 1118 Show beginning1 1.0.0 1117 fasta2tab 1.1.0
310 119 2013-02-20 16:01:00 1120 meme_meme 1.0.0 1119 tab2fasta 1.1.0
311 119 2013-02-20 16:01:00 1122 barchart_gnuplot 1.0.0 1121 Count1 1.0.0
312 120 2013-02-20 16:02:00 1128 cshl_awk_tool 1.0.0 1126 toolshed.g2.bx.psu.edu/repos/ryo-tas/macs14/peakcalling_macs14/1.4.1 1.4.1
313 120 2013-02-20 16:02:00 1133 gops_intersect_1 1.0.0 1128 cshl_awk_tool 1.0.0
314 120 2013-02-20 16:02:00 1133 gops_intersect_1 1.0.0 1130 cshl_awk_tool 1.0.0
315 120 2013-02-20 16:02:00 1131 get_flanks1 1.0.0 1132
316 120 2013-02-20 16:02:00 1134 Extract genomic DNA 1 2.2.2 1133 gops_intersect_1 1.0.0
317 120 2013-02-20 16:02:00 1145 Count1 1.0.0 1133 gops_intersect_1 1.0.0
318 120 2013-02-20 16:02:00 1134 Extract genomic DNA 1 2.2.2 1135
319 120 2013-02-20 16:02:00 1137 fasta2tab 1.1.0 1136 Extract genomic DNA 1 2.2.2
320 120 2013-02-20 16:02:00 1138 Show beginning1 1.0.0 1137 fasta2tab 1.1.0
321 120 2013-02-20 16:02:00 1140 meme_meme 1.0.0 1139 tab2fasta 1.1.0
322 121 2013-02-20 16:06:00 1152 cshl_awk_tool 1.0.0 1150 toolshed.g2.bx.psu.edu/repos/ryo-tas/macs14/peakcalling_macs14/1.4.1 1.4.1
323 121 2013-02-20 16:06:00 1153 gops_subtract_1 1.0.0 1152 cshl_awk_tool 1.0.0
324 121 2013-02-20 16:06:00 1160 Extract genomic DNA 1 2.2.2 1153 gops_subtract_1 1.0.0
325 121 2013-02-20 16:06:00 1171 Count1 1.0.0 1153 gops_subtract_1 1.0.0
326 121 2013-02-20 16:06:00 1153 gops_subtract_1 1.0.0 1154 cshl_awk_tool 1.0.0
327 121 2013-02-20 16:06:00 1158 Extract genomic DNA 1 2.2.2 1157 gops_intersect_1 1.0.0
328 121 2013-02-20 16:06:00 1169 Count1 1.0.0 1157 gops_intersect_1 1.0.0
329 121 2013-02-20 16:06:00 1165 fasta2tab 1.1.0 1158 Extract genomic DNA 1 2.2.2
330 121 2013-02-20 16:06:00 1158 Extract genomic DNA 1 2.2.2 1159
331 121 2013-02-20 16:06:00 1160 Extract genomic DNA 1 2.2.2 1159
332 121 2013-02-20 16:06:00 1161 fasta2tab 1.1.0 1160 Extract genomic DNA 1 2.2.2
333 121 2013-02-20 16:06:00 1162 Show beginning1 1.0.0 1161 fasta2tab 1.1.0
334 121 2013-02-20 16:06:00 1163 tab2fasta 1.1.0 1162 Show beginning1 1.0.0
335 121 2013-02-20 16:06:00 1164 meme_meme 1.0.0 1163 tab2fasta 1.1.0
336 121 2013-02-20 16:06:00 1167 tab2fasta 1.1.0 1166 Show beginning1 1.0.0
337 121 2013-02-20 16:06:00 1170 barchart_gnuplot 1.0.0 1169 Count1 1.0.0
338 121 2013-02-20 16:06:00 1172 barchart_gnuplot 1.0.0 1171 Count1 1.0.0
339 124 2013-02-21 16:53:00 1264 cat1 1.0.0 1263 addValue 1.0.0
340 124 2013-02-21 16:53:00 1305 Paste1 1.0.0 1267 Cut1 1.0.1
341 124 2013-02-21 16:53:00 1305 Paste1 1.0.0 1268 Cut1 1.0.1
342 124 2013-02-21 16:53:00 1275 Paste1 1.0.0 1269 Cut1 1.0.1
343 124 2013-02-21 16:53:00 1275 Paste1 1.0.0 1270 Cut1 1.0.1
344 124 2013-02-21 16:53:00 1299 Paste1 1.0.0 1271 Cut1 1.0.1
345 124 2013-02-21 16:53:00 1299 Paste1 1.0.0 1272 Cut1 1.0.1
346 124 2013-02-21 16:53:00 1304 Add_a_column1 1.1.0 1274 Paste1 1.0.0
347 124 2013-02-21 16:53:00 1264 cat1 1.0.0 1276 addValue 1.0.0
348 124 2013-02-21 16:53:00 1264 cat1 1.0.0 1277 addValue 1.0.0
349 124 2013-02-21 16:53:00 1284 Summary_Statistics1 1.1.0 1278 Filter1 1.1.0
350 124 2013-02-21 16:53:00 1285 Summary_Statistics1 1.1.0 1278 Filter1 1.1.0
351 124 2013-02-21 16:53:00 1278 Filter1 1.1.0 1279 gops_coverage_1 1.0.0
352 124 2013-02-21 16:53:00 1280 cshl_grep_tool 1.0.0 1279 gops_coverage_1 1.0.0
353 124 2013-02-21 16:53:00 1281 Filter1 1.1.0 1279 gops_coverage_1 1.0.0
354 124 2013-02-21 16:53:00 1282 Filter1 1.1.0 1279 gops_coverage_1 1.0.0
355 124 2013-02-21 16:53:00 1291 Summary_Statistics1 1.1.0 1280 cshl_grep_tool 1.0.0
356 124 2013-02-21 16:53:00 1288 Summary_Statistics1 1.1.0 1281 Filter1 1.1.0
357 124 2013-02-21 16:53:00 1289 Summary_Statistics1 1.1.0 1281 Filter1 1.1.0
358 124 2013-02-21 16:53:00 1294 Summary_Statistics1 1.1.0 1282 Filter1 1.1.0
359 124 2013-02-21 16:53:00 1295 Summary_Statistics1 1.1.0 1282 Filter1 1.1.0
360 124 2013-02-21 16:53:00 1293 Summary_Statistics1 1.1.0 1283 Filter1 1.1.0
361 124 2013-02-21 16:53:00 1296 Cut1 1.0.1 1284 Summary_Statistics1 1.1.0
362 124 2013-02-21 16:53:00 1297 Cut1 1.0.1 1285 Summary_Statistics1 1.1.0
363 124 2013-02-21 16:53:00 1264 cat1 1.0.0 1286 addValue 1.0.0
364 124 2013-02-21 16:53:00 1264 cat1 1.0.0 1287 addValue 1.0.0
365 124 2013-02-21 16:53:00 1269 Cut1 1.0.1 1289 Summary_Statistics1 1.1.0
366 124 2013-02-21 16:53:00 1272 Cut1 1.0.1 1290 Summary_Statistics1 1.1.0
367 124 2013-02-21 16:53:00 1271 Cut1 1.0.1 1291 Summary_Statistics1 1.1.0
368 124 2013-02-21 16:53:00 1268 Cut1 1.0.1 1294 Summary_Statistics1 1.1.0
369 124 2013-02-21 16:53:00 1274 Paste1 1.0.0 1296 Cut1 1.0.1
370 124 2013-02-21 16:53:00 1274 Paste1 1.0.0 1297 Cut1 1.0.1
371 124 2013-02-21 16:53:00 1302 Add_a_column1 1.1.0 1299 Paste1 1.0.0
372 124 2013-02-21 16:53:00 1277 addValue 1.0.0 1301 Add_a_column1 1.1.0
373 124 2013-02-21 16:53:00 1276 addValue 1.0.0 1302 Add_a_column1 1.1.0
374 124 2013-02-21 16:53:00 1279 gops_coverage_1 1.0.0 1306
375 124 2013-02-21 16:53:00 1279 gops_coverage_1 1.0.0 1307
376 125 2013-02-21 16:55:00 1317 barchart_gnuplot 1.0.0 1308 cat1 1.0.0
377 125 2013-02-21 16:55:00 1311 wc_gnu 1.0.0 1309 bedtools_intersectBed
378 125 2013-02-21 16:55:00 1312 sort1 1.0.1 1310 bedtools_intersectBed
379 125 2013-02-21 16:55:00 1316 cshl_uniq_tool 1.0.0 1314 cshl_awk_tool 1.0.0
380 125 2013-02-21 16:55:00 1315 Count1 1.0.0 1316 cshl_uniq_tool 1.0.0
381 127 2013-02-22 13:15:00 1332 barchart_gnuplot 1.0.0 1333 cat1 1.0.0
382 127 2013-02-22 13:15:00 1337 sort1 1.0.1 1335 toolshed.g2.bx.psu.edu/repos/aaronquinlan/bedtools/bedtools_intersectbed_bam/0.1.0 0.1.0
383 127 2013-02-22 13:15:00 1339 cshl_awk_tool 1.0.0 1337 sort1 1.0.1
384 127 2013-02-22 13:15:00 1333 cat1 1.0.0 1338 addValue 1.0.0
385 127 2013-02-22 13:15:00 1341 cshl_uniq_tool 1.0.0 1339 cshl_awk_tool 1.0.0
386 127 2013-02-22 13:15:00 1333 cat1 1.0.0 1340 Count1 1.0.0
387 129 2013-02-22 13:29:00 1356 barchart_gnuplot 1.0.0 1357 cat1 1.0.0
388 129 2013-02-22 13:29:00 1361 sort1 1.0.1 1359 toolshed.g2.bx.psu.edu/repos/aaronquinlan/bedtools/bedtools_intersectbed_bam/0.1.0 0.1.0
389 129 2013-02-22 13:29:00 1363 cshl_awk_tool 1.0.0 1361 sort1 1.0.1
390 129 2013-02-22 13:29:00 1365 cshl_uniq_tool 1.0.0 1363 cshl_awk_tool 1.0.0
391 129 2013-02-22 13:29:00 1364 Count1 1.0.0 1365 cshl_uniq_tool 1.0.0
392 130 2013-02-22 13:55:00 1373 sort1 1.0.1 1371 toolshed.g2.bx.psu.edu/repos/aaronquinlan/bedtools/bedtools_intersectbed_bam/0.1.0 0.1.0
393 130 2013-02-22 13:55:00 1374 addValue 1.0.0 1372 wc_gnu 1.0.0
394 130 2013-02-22 13:55:00 1369 cat1 1.0.0 1374 addValue 1.0.0
395 130 2013-02-22 13:55:00 1377 cshl_uniq_tool 1.0.0 1375 cshl_awk_tool 1.0.0
396 130 2013-02-22 13:55:00 1369 cat1 1.0.0 1376 Count1 1.0.0
397 130 2013-02-22 13:55:00 1370 toolshed.g2.bx.psu.edu/repos/aaronquinlan/bedtools/bedtools_intersectbed_bam/0.1.0 0.1.0 1378
398 130 2013-02-22 13:55:00 1370 toolshed.g2.bx.psu.edu/repos/aaronquinlan/bedtools/bedtools_intersectbed_bam/0.1.0 0.1.0 1379
399 131 2013-02-22 14:30:00 1384 Cut1 1385 Add_a_column1
400 131 2013-02-22 14:30:00 1385 Add_a_column1 1386 Add_a_column1
401 133 2013-02-22 15:23:00 1390 bam_to_sam 1389
402 133 2013-02-22 15:23:00 1392 toolshed.g2.bx.psu.edu/repos/ryo-tas/macs14/peakcalling_macs14/1.4.1 1389
403 133 2013-02-22 15:23:00 1391 toolshed.g2.bx.psu.edu/repos/devteam/picard/PicardASMetrics/1.56.0 1390 bam_to_sam
404 133 2013-02-22 15:23:00 1397 cshl_awk_tool 1392 toolshed.g2.bx.psu.edu/repos/ryo-tas/macs14/peakcalling_macs14/1.4.1
405 133 2013-02-22 15:23:00 1409 cshl_awk_tool 1392 toolshed.g2.bx.psu.edu/repos/ryo-tas/macs14/peakcalling_macs14/1.4.1
406 133 2013-02-22 15:23:00 1392 toolshed.g2.bx.psu.edu/repos/ryo-tas/macs14/peakcalling_macs14/1.4.1 1393
407 133 2013-02-22 15:23:00 1394 bam_to_sam 1393
408 133 2013-02-22 15:23:00 1395 toolshed.g2.bx.psu.edu/repos/devteam/picard/picard_BamIndexStats/1.56.0 1393
409 133 2013-02-22 15:23:00 1398 gops_intersect_1 1397 cshl_awk_tool
410 133 2013-02-22 15:23:00 1401 CONVERTER_interval_to_bed_0 1398 gops_intersect_1
411 133 2013-02-22 15:23:00 1398 gops_intersect_1 1399 get_flanks1
412 133 2013-02-22 15:23:00 1402 Count1 1401 CONVERTER_interval_to_bed_0
413 133 2013-02-22 15:23:00 1403 Extract genomic DNA 1 1401 CONVERTER_interval_to_bed_0
414 133 2013-02-22 15:23:00 1403 Extract genomic DNA 1 1404
415 133 2013-02-22 15:23:00 1408 meme_meme 1407 tab2fasta
416 133 2013-02-22 15:23:00 1411 bam_to_sam 1410
417 136 2013-02-22 18:24:00 1431 bams2ratio 1.3 1430
418 136 2013-02-22 18:24:00 1433 heatmapper 1.3 1431 bams2ratio 1.3
419 136 2013-02-22 18:24:00 1431 bams2ratio 1.3 1432
420 136 2013-02-22 18:24:00 1433 heatmapper 1.3 1434
421 139 2013-02-22 18:45:00 1472 Show beginning1 1.0.0 1473 fasta2tab 1.1.0
422 139 2013-02-22 18:45:00 1473 fasta2tab 1.1.0 1474 Extract genomic DNA 1 2.2.2
423 139 2013-02-22 18:45:00 1474 Extract genomic DNA 1 2.2.2 1475
424 141 2013-02-22 18:57:00 1488 Cut1 1.0.1 1489 cshl_uniq_tool 1.0.0
425 141 2013-02-22 18:57:00 1490 gops_intersect_1 1.0.0 1491
426 141 2013-02-22 18:57:00 1490 gops_intersect_1 1.0.0 1492
427 142 2013-02-25 10:04:00 1529 Paste1 1.0.0 1501 Cut1 1.0.1
428 142 2013-02-25 10:04:00 1529 Paste1 1.0.0 1502 Cut1 1.0.1
429 142 2013-02-25 10:04:00 1534 Add_a_column1 1.1.0 1504 Paste1 1.0.0
430 142 2013-02-25 10:04:00 1515 Summary_Statistics1 1.1.0 1508 Filter1 1.1.0
431 142 2013-02-25 10:04:00 1508 Filter1 1.1.0 1509 gops_coverage_1 1.0.0
432 142 2013-02-25 10:04:00 1510 cshl_grep_tool 1.0.0 1509 gops_coverage_1 1.0.0
433 142 2013-02-25 10:04:00 1511 Filter1 1.1.0 1509 gops_coverage_1 1.0.0
434 142 2013-02-25 10:04:00 1512 Filter1 1.1.0 1509 gops_coverage_1 1.0.0
435 142 2013-02-25 10:04:00 1520 Summary_Statistics1 1.1.0 1510 cshl_grep_tool 1.0.0
436 142 2013-02-25 10:04:00 1519 Summary_Statistics1 1.1.0 1511 Filter1 1.1.0
437 142 2013-02-25 10:04:00 1524 Summary_Statistics1 1.1.0 1512 Filter1 1.1.0
438 142 2013-02-25 10:04:00 1526 Cut1 1.0.1 1514 Summary_Statistics1 1.1.0
439 142 2013-02-25 10:04:00 1500 Cut1 1.0.1 1518 Summary_Statistics1 1.1.0
440 142 2013-02-25 10:04:00 1499 Cut1 1.0.1 1519 Summary_Statistics1 1.1.0
441 142 2013-02-25 10:04:00 1502 Cut1 1.0.1 1520 Summary_Statistics1 1.1.0
442 142 2013-02-25 10:04:00 1501 Cut1 1.0.1 1521 Summary_Statistics1 1.1.0
443 142 2013-02-25 10:04:00 1498 Cut1 1.0.1 1524 Summary_Statistics1 1.1.0
444 142 2013-02-25 10:04:00 1497 Cut1 1.0.1 1525 Summary_Statistics1 1.1.0
445 142 2013-02-25 10:04:00 1504 Paste1 1.0.0 1526 Cut1 1.0.1
446 142 2013-02-25 10:04:00 1504 Paste1 1.0.0 1527 Cut1 1.0.1
447 142 2013-02-25 10:04:00 1531 Add_a_column1 1.1.0 1528 Paste1 1.0.0
448 142 2013-02-25 10:04:00 1493 addValue 1.0.0 1530 Add_a_column1 1.1.0
449 142 2013-02-25 10:04:00 1506 addValue 1.0.0 1532 Add_a_column1 1.1.0
450 142 2013-02-25 10:04:00 1509 gops_coverage_1 1.0.0 1536
451 142 2013-02-25 10:04:00 1509 gops_coverage_1 1.0.0 1537
452 148 2013-03-17 21:43:00 1613 Filter1 1.1.0 1604
453 148 2013-03-17 21:43:00 1615 Filter1 1.1.0 1604
454 148 2013-03-17 21:43:00 1621 Filter1 1.1.0 1604
455 148 2013-03-17 21:43:00 1623 Filter1 1.1.0 1604
456 148 2013-03-17 21:43:00 1618 Paste1 1.0.0 1616 Paste1 1.0.0
457 148 2013-03-17 21:43:00 1618 Paste1 1.0.0 1619 Filter1 1.1.0
458 148 2013-03-17 21:43:00 1626 Paste1 1.0.0 1624 Paste1 1.0.0
459 148 2013-03-17 21:43:00 1626 Paste1 1.0.0 1627 Filter1 1.1.0
460 148 2013-03-17 21:43:00 1629 Show tail1 1.0.0 1628 Cut1 1.0.1
461 148 2013-03-17 21:43:00 1632 Add_a_column1 1.1.0 1631 Add_a_column1 1.1.0
462 148 2013-03-17 21:43:00 1634 Add_a_column1 1.1.0 1633 Add_a_column1 1.1.0
463 148 2013-03-17 21:43:00 1636 Cut1 1.0.1 1635 Add_a_column1 1.1.0
464 148 2013-03-17 21:43:00 1638 Add_a_column1 1.1.0 1637 Add_a_column1 1.1.0
465 148 2013-03-17 21:43:00 1639 Add_a_column1 1.1.0 1638 Add_a_column1 1.1.0
466 148 2013-03-17 21:43:00 1640 Add_a_column1 1.1.0 1639 Add_a_column1 1.1.0
467 148 2013-03-17 21:43:00 1642 Cut1 1.0.1 1641 Add_a_column1 1.1.0
468 150 2013-03-25 09:27:00 1652 comp1 1.0.2 1653 Show beginning1 1.0.0
469 150 2013-03-25 09:27:00 1652 comp1 1.0.2 1654
470 150 2013-03-25 09:27:00 1655 gops_join_1 1.0.0 1654
471 150 2013-03-25 09:27:00 1655 gops_join_1 1.0.0 1656
472 150 2013-03-25 09:27:00 1653 Show beginning1 1.0.0 1658 sort1 1.0.1
473 153 2013-04-09 12:18:00 1766 toolshed.g2.bx.psu.edu/repos/aaronquinlan/bedtools/bedtools_multiintersectbed/0.1.0 0.1.0 1765
474 153 2013-04-09 12:18:00 1772 Add_a_column1 1.1.0 1766 toolshed.g2.bx.psu.edu/repos/aaronquinlan/bedtools/bedtools_multiintersectbed/0.1.0 0.1.0
475 153 2013-04-09 12:18:00 1766 toolshed.g2.bx.psu.edu/repos/aaronquinlan/bedtools/bedtools_multiintersectbed/0.1.0 0.1.0 1767
476 153 2013-04-09 12:18:00 1766 toolshed.g2.bx.psu.edu/repos/aaronquinlan/bedtools/bedtools_multiintersectbed/0.1.0 0.1.0 1768
477 153 2013-04-09 12:18:00 1766 toolshed.g2.bx.psu.edu/repos/aaronquinlan/bedtools/bedtools_multiintersectbed/0.1.0 0.1.0 1769
478 153 2013-04-09 12:18:00 1766 toolshed.g2.bx.psu.edu/repos/aaronquinlan/bedtools/bedtools_multiintersectbed/0.1.0 0.1.0 1770
479 153 2013-04-09 12:18:00 1766 toolshed.g2.bx.psu.edu/repos/aaronquinlan/bedtools/bedtools_multiintersectbed/0.1.0 0.1.0 1771
480 153 2013-04-09 12:18:00 1773 Cut1 1.0.1 1772 Add_a_column1 1.1.0
481 153 2013-04-09 12:18:00 1798 Add_a_column1 1.1.0 1774 toolshed.g2.bx.psu.edu/repos/aaronquinlan/bedtools/bedtools_mergebedgraph/0.1.0 0.1.0
482 153 2013-04-09 12:18:00 1799 Filter1 1.1.0 1798 Add_a_column1 1.1.0
483 153 2013-04-09 12:18:00 1801 Cut1 1.0.1 1802
484 155 2013-04-10 19:28:00 1818 bismark_bowtie 0.7.7.3 1817
485 155 2013-04-10 19:28:00 1818 bismark_bowtie 0.7.7.3 1819
486 155 2013-04-10 19:28:00 1818 bismark_bowtie 0.7.7.3 1820
487 155 2013-04-10 19:28:00 1818 bismark_bowtie 0.7.7.3 1821
488 155 2013-04-10 19:28:00 1818 bismark_bowtie 0.7.7.3 1822
489 155 2013-04-10 19:28:00 1818 bismark_bowtie 0.7.7.3 1823
490 155 2013-04-10 19:28:00 1825 samtools_rmdup 1.0.0 1824 sam_to_bam 1.1.2
491 155 2013-04-10 19:28:00 1826 methtools_calling 0.1.1 1825 samtools_rmdup 1.0.0
492 158 2013-04-18 07:56:00 1888 Cut1 1.0.1 1887
493 158 2013-04-18 07:56:00 1890 Add_a_column1 1.1.0 1889 Filter1 1.1.0
494 158 2013-04-18 07:56:00 1891 cshl_find_and_replace 1.0.0 1890 Add_a_column1 1.1.0
495 158 2013-04-18 07:56:00 1892 cshl_find_and_replace 1.0.0 1891 cshl_find_and_replace 1.0.0
496 158 2013-04-18 07:56:00 1895 cshl_find_and_replace 1.0.0 1894 cshl_find_and_replace 1.0.0
497 158 2013-04-18 07:56:00 1898 cshl_find_and_replace 1.0.0 1897 cshl_find_and_replace 1.0.0
498 158 2013-04-18 07:56:00 1901 Cut1 1.0.1 1900 Add_a_column1 1.1.0
499 158 2013-04-18 07:56:00 1903 mergeCols1 1.0.1 1902 addValue 1.0.0
500 158 2013-04-18 07:56:00 1904 Cut1 1.0.1 1903 mergeCols1 1.0.1
501 160 2013-04-28 20:36:00 1910 sort1 1909 mergeCols1
502 160 2013-04-28 20:36:00 1912 methtools_destrand 1911 Cut1
503 162 2013-05-17 14:43:00 1927 gops_intersect_1 1.0.0 1922 cshl_awk_tool 1.0.0
504 162 2013-05-17 14:43:00 1930 Extract genomic DNA 1 2.2.2 1923 gops_subtract_1 1.0.0
505 162 2013-05-17 14:43:00 1941 Count1 1.0.0 1923 gops_subtract_1 1.0.0
506 162 2013-05-17 14:43:00 1927 gops_intersect_1 1.0.0 1924 cshl_awk_tool 1.0.0
507 162 2013-05-17 14:43:00 1924 cshl_awk_tool 1.0.0 1925 get_flanks1 1.0.0
508 162 2013-05-17 14:43:00 1939 Count1 1.0.0 1927 gops_intersect_1 1.0.0
509 162 2013-05-17 14:43:00 1930 Extract genomic DNA 1 2.2.2 1929
510 162 2013-05-17 14:43:00 1933 tab2fasta 1.1.0 1932 Show beginning1 1.0.0
511 162 2013-05-17 14:43:00 1936 Show beginning1 1.0.0 1935 fasta2tab 1.1.0
512 162 2013-05-17 14:43:00 1937 tab2fasta 1.1.0 1936 Show beginning1 1.0.0
513 162 2013-05-17 14:43:00 1938 meme_meme 1.0.0 1937 tab2fasta 1.1.0
514 162 2013-05-17 14:43:00 1940 barchart_gnuplot 1.0.0 1939 Count1 1.0.0
515 164 2013-05-20 16:05:00 1965 bowtie2 0.1 1964
516 164 2013-05-20 16:05:00 1966 samtools_rmdup 1.0.0 1965 bowtie2 0.1
517 164 2013-05-20 16:05:00 1968 bam2wig 1.3 1966 samtools_rmdup 1.0.0
518 164 2013-05-20 16:05:00 1970 bowtie2 0.1 1969
519 164 2013-05-20 16:05:00 1972 bam2wig 1.3 1971 samtools_rmdup 1.0.0
520 164 2013-05-20 16:05:00 1974 bowtie2 0.1 1973
521 164 2013-05-20 16:05:00 1976 bam2wig 1.3 1975 samtools_rmdup 1.0.0
522 164 2013-05-20 16:05:00 1978 bowtie2 0.1 1977
523 164 2013-05-20 16:05:00 1980 bam2wig 1.3 1979 samtools_rmdup 1.0.0
524 164 2013-05-20 16:05:00 1983 samtools_rmdup 1.0.0 1982 bowtie2 0.1
525 164 2013-05-20 16:05:00 1984 bam2wig 1.3 1983 samtools_rmdup 1.0.0
526 165 2013-05-23 17:21:00 1986 toolshed.g2.bx.psu.edu/repos/bjoern-gruening/trim_galore/trim_galore/0.2.4.1 1985
527 165 2013-05-23 17:21:00 1986 toolshed.g2.bx.psu.edu/repos/bjoern-gruening/trim_galore/trim_galore/0.2.4.1 1987
528 165 2013-05-23 17:21:00 1992 toolshed.g2.bx.psu.edu/repos/bjoern-gruening/trim_galore/trim_galore/0.2.4.1 1991
529 165 2013-05-23 17:21:00 1992 toolshed.g2.bx.psu.edu/repos/bjoern-gruening/trim_galore/trim_galore/0.2.4.1 1993
530 171 2013-05-31 10:17:00 2174 Cut1 2173
531 171 2013-05-31 10:17:00 2176 Add_a_column1 2175 Filter1
532 171 2013-05-31 10:17:00 2182 cshl_find_and_replace 2181 cshl_find_and_replace
533 171 2013-05-31 10:17:00 2183 cshl_find_and_replace 2182 cshl_find_and_replace
534 171 2013-05-31 10:17:00 2184 cshl_find_and_replace 2183 cshl_find_and_replace
535 171 2013-05-31 10:17:00 2185 Add_a_column1 2184 cshl_find_and_replace
536 171 2013-05-31 10:17:00 2187 Cut1 2186 Add_a_column1
537 171 2013-05-31 10:17:00 2189 mergeCols1 2188 addValue
538 171 2013-05-31 10:17:00 2199 samtools_rmdup 2191 sam_merge2
539 171 2013-05-31 10:17:00 2201 Filter1 2200 methtools_calling
540 171 2013-05-31 10:17:00 2202 Add_a_column1 2201 Filter1
541 171 2013-05-31 10:17:00 2206 cshl_sort_header 2205 gops_subtract_1
542 171 2013-05-31 10:17:00 2207 methtools_destrand 2206 cshl_sort_header
543 174 2013-06-09 19:14:00 2338 tophat2 0.5 2321 toolshed.g2.bx.psu.edu/repos/bjoern-gruening/trim_galore/trim_galore/0.2.4.1 0.2.4.1
544 174 2013-06-09 19:14:00 2338 tophat2 0.5 2321 toolshed.g2.bx.psu.edu/repos/bjoern-gruening/trim_galore/trim_galore/0.2.4.1 0.2.4.1
545 174 2013-06-09 19:14:00 2336 tophat2 0.5 2322 toolshed.g2.bx.psu.edu/repos/bjoern-gruening/trim_galore/trim_galore/0.2.4.1 0.2.4.1
546 174 2013-06-09 19:14:00 2336 tophat2 0.5 2322 toolshed.g2.bx.psu.edu/repos/bjoern-gruening/trim_galore/trim_galore/0.2.4.1 0.2.4.1
547 174 2013-06-09 19:14:00 2343 tophat2 0.5 2323 toolshed.g2.bx.psu.edu/repos/bjoern-gruening/trim_galore/trim_galore/0.2.4.1 0.2.4.1
548 174 2013-06-09 19:14:00 2343 tophat2 0.5 2323 toolshed.g2.bx.psu.edu/repos/bjoern-gruening/trim_galore/trim_galore/0.2.4.1 0.2.4.1
549 174 2013-06-09 19:14:00 2342 tophat2 0.5 2324 toolshed.g2.bx.psu.edu/repos/bjoern-gruening/trim_galore/trim_galore/0.2.4.1 0.2.4.1
550 174 2013-06-09 19:14:00 2342 tophat2 0.5 2324 toolshed.g2.bx.psu.edu/repos/bjoern-gruening/trim_galore/trim_galore/0.2.4.1 0.2.4.1
551 174 2013-06-09 19:14:00 2317 cuffdiff 0.0.5 2331 tophat2 0.5
552 174 2013-06-09 19:14:00 2344 cufflinks 0.0.5 2331 tophat2 0.5
553 174 2013-06-09 19:14:00 2316 cuffdiff 0.0.5 2333 cuffmerge 0.0.5
554 174 2013-06-09 19:14:00 2317 cuffdiff 0.0.5 2333 cuffmerge 0.0.5
555 174 2013-06-09 19:14:00 2317 cuffdiff 0.0.5 2334 tophat2 0.5
556 174 2013-06-09 19:14:00 2317 cuffdiff 0.0.5 2335 tophat2 0.5
557 174 2013-06-09 19:14:00 2316 cuffdiff 0.0.5 2336 tophat2 0.5
558 174 2013-06-09 19:14:00 2332 cufflinks 0.0.5 2336 tophat2 0.5
559 174 2013-06-09 19:14:00 2331 tophat2 0.5 2337 toolshed.g2.bx.psu.edu/repos/bjoern-gruening/trim_galore/trim_galore/0.2.4.1 0.2.4.1
560 174 2013-06-09 19:14:00 2331 tophat2 0.5 2337 toolshed.g2.bx.psu.edu/repos/bjoern-gruening/trim_galore/trim_galore/0.2.4.1 0.2.4.1
561 174 2013-06-09 19:14:00 2317 cuffdiff 0.0.5 2338 tophat2 0.5
562 174 2013-06-09 19:14:00 2326 cufflinks 0.0.5 2338 tophat2 0.5
563 174 2013-06-09 19:14:00 2316 cuffdiff 0.0.5 2339 tophat2 0.5
564 174 2013-06-09 19:14:00 2316 cuffdiff 0.0.5 2340 tophat2 0.5
565 174 2013-06-09 19:14:00 2328 cufflinks 0.0.5 2340 tophat2 0.5
566 174 2013-06-09 19:14:00 2316 cuffdiff 0.0.5 2341 tophat2 0.5
567 174 2013-06-09 19:14:00 2316 cuffdiff 0.0.5 2342 tophat2 0.5
568 174 2013-06-09 19:14:00 2316 cuffdiff 0.0.5 2343 tophat2 0.5
569 174 2013-06-09 19:14:00 2316 cuffdiff 0.0.5 2345
570 174 2013-06-09 19:14:00 2317 cuffdiff 0.0.5 2345
571 174 2013-06-09 19:14:00 2326 cufflinks 0.0.5 2345
572 174 2013-06-09 19:14:00 2328 cufflinks 0.0.5 2345
573 174 2013-06-09 19:14:00 2331 tophat2 0.5 2345
574 174 2013-06-09 19:14:00 2332 cufflinks 0.0.5 2345
575 174 2013-06-09 19:14:00 2336 tophat2 0.5 2345
576 174 2013-06-09 19:14:00 2338 tophat2 0.5 2345
577 174 2013-06-09 19:14:00 2342 tophat2 0.5 2345
578 174 2013-06-09 19:14:00 2343 tophat2 0.5 2345
579 174 2013-06-09 19:14:00 2344 cufflinks 0.0.5 2345
580 174 2013-06-09 19:14:00 2320 toolshed.g2.bx.psu.edu/repos/bjoern-gruening/trim_galore/trim_galore/0.2.4.1 0.2.4.1 2350
581 174 2013-06-09 19:14:00 2320 toolshed.g2.bx.psu.edu/repos/bjoern-gruening/trim_galore/trim_galore/0.2.4.1 0.2.4.1 2351
582 174 2013-06-09 19:14:00 2321 toolshed.g2.bx.psu.edu/repos/bjoern-gruening/trim_galore/trim_galore/0.2.4.1 0.2.4.1 2352
583 174 2013-06-09 19:14:00 2321 toolshed.g2.bx.psu.edu/repos/bjoern-gruening/trim_galore/trim_galore/0.2.4.1 0.2.4.1 2353
584 174 2013-06-09 19:14:00 2323 toolshed.g2.bx.psu.edu/repos/bjoern-gruening/trim_galore/trim_galore/0.2.4.1 0.2.4.1 2356
585 174 2013-06-09 19:14:00 2323 toolshed.g2.bx.psu.edu/repos/bjoern-gruening/trim_galore/trim_galore/0.2.4.1 0.2.4.1 2357
586 174 2013-06-09 19:14:00 2324 toolshed.g2.bx.psu.edu/repos/bjoern-gruening/trim_galore/trim_galore/0.2.4.1 0.2.4.1 2358
587 174 2013-06-09 19:14:00 2324 toolshed.g2.bx.psu.edu/repos/bjoern-gruening/trim_galore/trim_galore/0.2.4.1 0.2.4.1 2359
588 176 2013-06-12 15:39:00 2383 Cut1 2374
589 176 2013-06-12 15:39:00 2385 Filter1 2383 Cut1
590 176 2013-06-12 15:39:00 2387 Add_a_column1 2385 Filter1
591 176 2013-06-12 15:39:00 2388 methtools_calling 2386 samtools_rmdup
592 176 2013-06-12 15:39:00 2390 Filter1 2388 methtools_calling
593 176 2013-06-12 15:39:00 2392 gops_subtract_1 2388 methtools_calling
594 176 2013-06-12 15:39:00 2396 cshl_find_and_replace 2393 cshl_find_and_replace
595 176 2013-06-12 15:39:00 2397 Add_a_column1 2394 Add_a_column1
596 176 2013-06-12 15:39:00 2399 cshl_find_and_replace 2396 cshl_find_and_replace
597 176 2013-06-12 15:39:00 2400 cshl_find_and_replace 2399 cshl_find_and_replace
598 176 2013-06-12 15:39:00 2403 cshl_find_and_replace 2402 cshl_find_and_replace
599 176 2013-06-12 15:39:00 2406 Cut1 2405 Add_a_column1
600 176 2013-06-12 15:39:00 2408 mergeCols1 2407 addValue
601 179 2013-06-12 20:23:00 2444 Paste1 1.0.0 2442 methtools_filter 0.1.1
602 179 2013-06-12 20:23:00 2444 Paste1 1.0.0 2442 methtools_filter 0.1.1
603 179 2013-06-12 20:23:00 2449 Add_a_column1 1.1.0 2446 Filter1 1.1.0
604 179 2013-06-12 20:23:00 2450 toolshed.g2.bx.psu.edu/repos/aaronquinlan/bedtools/bedtools_intersectbed_bam/0.1.0 0.1.0 2447 Filter1 1.1.0
605 179 2013-06-12 20:23:00 2450 toolshed.g2.bx.psu.edu/repos/aaronquinlan/bedtools/bedtools_intersectbed_bam/0.1.0 0.1.0 2451 Cut1 1.0.2
606 182 2013-06-15 20:36:00 2505 Cut1 1.0.2 2504
607 182 2013-06-15 20:36:00 2506 Filter1 1.1.0 2505 Cut1 1.0.2
608 182 2013-06-15 20:36:00 2509 cshl_find_and_replace 1.0.0 2508 cshl_find_and_replace 1.0.0
609 182 2013-06-15 20:36:00 2512 cshl_find_and_replace 1.0.0 2511 cshl_find_and_replace 1.0.0
610 182 2013-06-15 20:36:00 2515 cshl_find_and_replace 1.0.0 2514 cshl_find_and_replace 1.0.0
611 182 2013-06-15 20:36:00 2519 addValue 1.0.0 2518 Cut1 1.0.2
612 182 2013-06-15 20:36:00 2520 mergeCols1 1.0.1 2519 addValue 1.0.0
613 205 2013-06-21 07:07:00 2667 Cut1 1.0.2 2664 Add_a_column1 1.1.0
614 205 2013-06-21 07:07:00 2664 Add_a_column1 1.1.0 2665 Add_a_column1 1.1.0
615 205 2013-06-21 07:07:00 2670 toolshed.g2.bx.psu.edu/repos/aaronquinlan/bedtools/bedtools_intersectbed_bam/0.1.0 0.1.0 2668 Cut1 1.0.2
616 205 2013-06-21 07:07:00 2668 Cut1 1.0.2 2669 mergeCols1 1.0.1
617 205 2013-06-21 07:07:00 2677 cshl_find_and_replace 1.0.0 2674 cshl_find_and_replace 1.0.0
618 205 2013-06-21 07:07:00 2670 toolshed.g2.bx.psu.edu/repos/aaronquinlan/bedtools/bedtools_intersectbed_bam/0.1.0 0.1.0 2680
619 218 2013-06-21 19:40:00 2794 toolshed.g2.bx.psu.edu/repos/aaronquinlan/bedtools/bedtools_intersectbed_bam/0.1.0 0.1.0 2792 methtools_destrand 0.1.1
620 218 2013-06-21 19:40:00 2795 toolshed.g2.bx.psu.edu/repos/aaronquinlan/bedtools/bedtools_intersectbed_bam/0.1.0 0.1.0 2792 methtools_destrand 0.1.1
621 218 2013-06-21 19:40:00 2794 toolshed.g2.bx.psu.edu/repos/aaronquinlan/bedtools/bedtools_intersectbed_bam/0.1.0 0.1.0 2793 methtools_destrand 0.1.1
622 218 2013-06-21 19:40:00 2795 toolshed.g2.bx.psu.edu/repos/aaronquinlan/bedtools/bedtools_intersectbed_bam/0.1.0 0.1.0 2793 methtools_destrand 0.1.1
623 218 2013-06-21 19:40:00 2797 methtools_filter 0.1.1 2794 toolshed.g2.bx.psu.edu/repos/aaronquinlan/bedtools/bedtools_intersectbed_bam/0.1.0 0.1.0
624 218 2013-06-21 19:40:00 2797 methtools_filter 0.1.1 2795 toolshed.g2.bx.psu.edu/repos/aaronquinlan/bedtools/bedtools_intersectbed_bam/0.1.0 0.1.0
625 218 2013-06-21 19:40:00 2796 methtools_dmr 0.1.1 2797 methtools_filter 0.1.1
626 218 2013-06-21 19:40:00 2796 methtools_dmr 0.1.1 2797 methtools_filter 0.1.1
627 224 2013-06-22 06:21:00 2852 cshl_sort_header 0.1 2849
628 229 2013-06-22 14:59:00 2862 methtools_destrand 0.1.1 2863 cshl_sort_header 0.1
629 241 2013-06-23 20:34:00 3003 toolshed.g2.bx.psu.edu/repos/aaronquinlan/bedtools/bedtools_intersectbed_bam/0.1.0 0.1.0 2996 Filter1 1.1.0
630 241 2013-06-23 20:34:00 3001 toolshed.g2.bx.psu.edu/repos/aaronquinlan/bedtools/bedtools_intersectbed_bam/0.1.0 0.1.0 2997 Filter1 1.1.0
631 241 2013-06-23 20:34:00 3002 toolshed.g2.bx.psu.edu/repos/aaronquinlan/bedtools/bedtools_intersectbed_bam/0.1.0 0.1.0 2998 Filter1 1.1.0
632 241 2013-06-23 20:34:00 3003 toolshed.g2.bx.psu.edu/repos/aaronquinlan/bedtools/bedtools_intersectbed_bam/0.1.0 0.1.0 2998 Filter1 1.1.0
633 241 2013-06-23 20:34:00 3001 toolshed.g2.bx.psu.edu/repos/aaronquinlan/bedtools/bedtools_intersectbed_bam/0.1.0 0.1.0 2999 Filter1 1.1.0
634 241 2013-06-23 20:34:00 3002 toolshed.g2.bx.psu.edu/repos/aaronquinlan/bedtools/bedtools_intersectbed_bam/0.1.0 0.1.0 3003 toolshed.g2.bx.psu.edu/repos/aaronquinlan/bedtools/bedtools_intersectbed_bam/0.1.0 0.1.0
635 241 2013-06-23 20:34:00 2997 Filter1 1.1.0 3004
636 241 2013-06-23 20:34:00 2998 Filter1 1.1.0 3005
637 241 2013-06-23 20:34:00 2999 Filter1 1.1.0 3005
638 242 2013-06-24 11:29:00 3036 bowtie2 3006
639 242 2013-06-24 11:29:00 3037 toolshed.g2.bx.psu.edu/repos/bjoern-gruening/trim_galore/trim_galore/0.2.4.1 3007
640 242 2013-06-24 11:29:00 3038 toolshed.g2.bx.psu.edu/repos/bjoern-gruening/trim_galore/trim_galore/0.2.4.1 3008
641 242 2013-06-24 11:29:00 3039 toolshed.g2.bx.psu.edu/repos/bjoern-gruening/trim_galore/trim_galore/0.2.4.1 3009
642 242 2013-06-24 11:29:00 3042 toolshed.g2.bx.psu.edu/repos/bjoern-gruening/trim_galore/trim_galore/0.2.4.1 3010
643 242 2013-06-24 11:29:00 3044 bowtie2 3012
644 242 2013-06-24 11:29:00 3045 toolshed.g2.bx.psu.edu/repos/bjoern-gruening/trim_galore/trim_galore/0.2.4.1 3012
645 242 2013-06-24 11:29:00 3053 bowtie2 3018
646 242 2013-06-24 11:29:00 3054 toolshed.g2.bx.psu.edu/repos/bjoern-gruening/trim_galore/trim_galore/0.2.4.1 3018
647 242 2013-06-24 11:29:00 3057 toolshed.g2.bx.psu.edu/repos/bjoern-gruening/trim_galore/trim_galore/0.2.4.1 3028
648 242 2013-06-24 11:29:00 3058 toolshed.g2.bx.psu.edu/repos/bjoern-gruening/trim_galore/trim_galore/0.2.4.1 3029
649 242 2013-06-24 11:29:00 3060 toolshed.g2.bx.psu.edu/repos/bjoern-gruening/trim_galore/trim_galore/0.2.4.1 3031
650 242 2013-06-24 11:29:00 3067 bowtie2 3039 toolshed.g2.bx.psu.edu/repos/bjoern-gruening/trim_galore/trim_galore/0.2.4.1
651 242 2013-06-24 11:29:00 3069 bowtie2 3042 toolshed.g2.bx.psu.edu/repos/bjoern-gruening/trim_galore/trim_galore/0.2.4.1
652 242 2013-06-24 11:29:00 3070 bowtie2 3043 toolshed.g2.bx.psu.edu/repos/bjoern-gruening/trim_galore/trim_galore/0.2.4.1
653 242 2013-06-24 11:29:00 3072 bowtie2 3046 toolshed.g2.bx.psu.edu/repos/bjoern-gruening/trim_galore/trim_galore/0.2.4.1
654 242 2013-06-24 11:29:00 3074 bowtie2 3049 toolshed.g2.bx.psu.edu/repos/bjoern-gruening/trim_galore/trim_galore/0.2.4.1
655 242 2013-06-24 11:29:00 3077 samtools_rmdup 3053 bowtie2
656 242 2013-06-24 11:29:00 3081 bowtie2 3057 toolshed.g2.bx.psu.edu/repos/bjoern-gruening/trim_galore/trim_galore/0.2.4.1
657 242 2013-06-24 11:29:00 3082 bowtie2 3058 toolshed.g2.bx.psu.edu/repos/bjoern-gruening/trim_galore/trim_galore/0.2.4.1
658 242 2013-06-24 11:29:00 3085 bowtie2 3061 toolshed.g2.bx.psu.edu/repos/bjoern-gruening/trim_galore/trim_galore/0.2.4.1
659 242 2013-06-24 11:29:00 3091 samtools_rmdup 3068 bowtie2
660 242 2013-06-24 11:29:00 3094 samtools_rmdup 3071 bowtie2
661 242 2013-06-24 11:29:00 3095 samtools_rmdup 3072 bowtie2
662 242 2013-06-24 11:29:00 3097 samtools_rmdup 3074 bowtie2
663 242 2013-06-24 11:29:00 3100 samtools_rmdup 3078 bowtie2
664 242 2013-06-24 11:29:00 3101 samtools_rmdup 3079 bowtie2
665 242 2013-06-24 11:29:00 3102 samtools_rmdup 3080 bowtie2
666 242 2013-06-24 11:29:00 3106 samtools_rmdup 3084 bowtie2
667 242 2013-06-24 11:29:00 3108 samtools_rmdup 3086 bowtie2
668 242 2013-06-24 11:29:00 3110 sam_merge2 3087 samtools_rmdup
669 242 2013-06-24 11:29:00 3109 sam_merge2 3088 samtools_rmdup
670 242 2013-06-24 11:29:00 3109 sam_merge2 3089 samtools_rmdup
671 242 2013-06-24 11:29:00 3110 sam_merge2 3090 samtools_rmdup
672 242 2013-06-24 11:29:00 3111 sam_merge2 3091 samtools_rmdup
673 242 2013-06-24 11:29:00 3111 sam_merge2 3093 samtools_rmdup
674 242 2013-06-24 11:29:00 3112 sam_merge2 3094 samtools_rmdup
675 242 2013-06-24 11:29:00 3112 sam_merge2 3095 samtools_rmdup
676 242 2013-06-24 11:29:00 3114 sam_merge2 3098 samtools_rmdup
677 242 2013-06-24 11:29:00 3114 sam_merge2 3099 samtools_rmdup
678 242 2013-06-24 11:29:00 3122 bam2wig 3111 sam_merge2
679 242 2013-06-24 11:29:00 3124 bam2wig 3113 sam_merge2
680 242 2013-06-24 11:29:00 3125 bam2wig 3114 sam_merge2
681 242 2013-06-24 11:29:00 3126 bam2wig 3115 sam_merge2
682 242 2013-06-24 11:29:00 3129 bam2wig 3119 sam_merge2
683 243 2013-06-27 14:03:00 3131 toolshed.g2.bx.psu.edu/repos/bjoern-gruening/trim_galore/trim_galore/0.2.4.1 3130
684 243 2013-06-27 14:03:00 3132 bowtie2 3131 toolshed.g2.bx.psu.edu/repos/bjoern-gruening/trim_galore/trim_galore/0.2.4.1
685 250 2013-06-27 04:51:00 3181 methtools_filter 0.1.1 3178 toolshed.g2.bx.psu.edu/repos/aaronquinlan/bedtools/bedtools_intersectbed_bam/0.1.0 0.1.0
686 250 2013-06-27 04:51:00 3181 methtools_filter 0.1.1 3179 toolshed.g2.bx.psu.edu/repos/aaronquinlan/bedtools/bedtools_intersectbed_bam/0.1.0 0.1.0
687 250 2013-06-27 04:51:00 3180 methtools_dmr 0.1.1 3181 methtools_filter 0.1.1
688 250 2013-06-27 04:51:00 3180 methtools_dmr 0.1.1 3181 methtools_filter 0.1.1
689 250 2013-06-27 04:51:00 3178 toolshed.g2.bx.psu.edu/repos/aaronquinlan/bedtools/bedtools_intersectbed_bam/0.1.0 0.1.0 3182
690 250 2013-06-27 04:51:00 3179 toolshed.g2.bx.psu.edu/repos/aaronquinlan/bedtools/bedtools_intersectbed_bam/0.1.0 0.1.0 3182
691 250 2013-06-27 04:51:00 3178 toolshed.g2.bx.psu.edu/repos/aaronquinlan/bedtools/bedtools_intersectbed_bam/0.1.0 0.1.0 3183
692 250 2013-06-27 04:51:00 3179 toolshed.g2.bx.psu.edu/repos/aaronquinlan/bedtools/bedtools_intersectbed_bam/0.1.0 0.1.0 3183
693 252 2013-06-27 09:40:00 3191 Add_a_column1 1.1.0 3189 Add_a_column1 1.1.0
694 252 2013-06-27 09:40:00 3192 Filter1 1.1.0 3190 Cut1 1.0.2
695 252 2013-06-27 09:40:00 3189 Add_a_column1 1.1.0 3193
696 264 2013-07-31 09:27:00 3274 bowtie2 0.1 3272 toolshed.g2.bx.psu.edu/repos/bjoern-gruening/trim_galore/trim_galore/0.2.4.1 0.2.4.1
697 264 2013-07-31 09:27:00 3275 bowtie2 0.1 3273 toolshed.g2.bx.psu.edu/repos/bjoern-gruening/trim_galore/trim_galore/0.2.4.1 0.2.4.1
698 264 2013-07-31 09:27:00 3276 samtools_rmdup 1.0.0 3274 bowtie2 0.1
699 264 2013-07-31 09:27:00 3277 samtools_rmdup 1.0.0 3275 bowtie2 0.1
700 264 2013-07-31 09:27:00 3278 bam2wig 1.3 3279 sam_merge2 1.1.2
701 264 2013-07-31 09:27:00 3273 toolshed.g2.bx.psu.edu/repos/bjoern-gruening/trim_galore/trim_galore/0.2.4.1 0.2.4.1 3281
702 278 2013-06-30 21:55:00 3370 bismark_bowtie 0.7.12 3368 toolshed.g2.bx.psu.edu/repos/bjoern-gruening/trim_galore/trim_galore/0.2.4.1 0.2.4.1
703 278 2013-06-30 21:55:00 3370 bismark_bowtie 0.7.12 3368 toolshed.g2.bx.psu.edu/repos/bjoern-gruening/trim_galore/trim_galore/0.2.4.1 0.2.4.1
704 278 2013-06-30 21:55:00 3368 toolshed.g2.bx.psu.edu/repos/bjoern-gruening/trim_galore/trim_galore/0.2.4.1 0.2.4.1 3371
705 278 2013-06-30 21:55:00 3368 toolshed.g2.bx.psu.edu/repos/bjoern-gruening/trim_galore/trim_galore/0.2.4.1 0.2.4.1 3372
706 281 2013-07-01 13:45:00 3379 Convert characters1 3378
707 281 2013-07-01 13:45:00 3383 Cut1 3382 Add_a_column1
708 285 2013-07-03 14:58:00 3394 Summary_Statistics1 1.1.0 3393 Filter1 1.1.0
709 285 2013-07-03 14:58:00 3393 Filter1 1.1.0 3395
710 292 2013-07-03 17:45:00 3470 toolshed.g2.bx.psu.edu/repos/bjoern-gruening/trim_galore/trim_galore/0.2.4.1 3455
711 292 2013-07-03 17:45:00 3470 toolshed.g2.bx.psu.edu/repos/bjoern-gruening/trim_galore/trim_galore/0.2.4.1 3456
712 292 2013-07-03 17:45:00 3473 toolshed.g2.bx.psu.edu/repos/bjoern-gruening/trim_galore/trim_galore/0.2.4.1 3461
713 292 2013-07-03 17:45:00 3473 toolshed.g2.bx.psu.edu/repos/bjoern-gruening/trim_galore/trim_galore/0.2.4.1 3462
714 292 2013-07-03 17:45:00 3480 tophat2 3463
715 292 2013-07-03 17:45:00 3481 tophat2 3463
716 292 2013-07-03 17:45:00 3474 tophat2 3463
717 292 2013-07-03 17:45:00 3475 tophat2 3463
718 292 2013-07-03 17:45:00 3483 tophat2 3463
719 292 2013-07-03 17:45:00 3478 tophat2 3463
720 292 2013-07-03 17:45:00 3484 cufflinks 3463
721 292 2013-07-03 17:45:00 3495 cufflinks 3463
722 292 2013-07-03 17:45:00 3488 cufflinks 3463
723 292 2013-07-03 17:45:00 3474 tophat2 3464 toolshed.g2.bx.psu.edu/repos/bjoern-gruening/trim_galore/trim_galore/0.2.4.1
724 292 2013-07-03 17:45:00 3474 tophat2 3464 toolshed.g2.bx.psu.edu/repos/bjoern-gruening/trim_galore/trim_galore/0.2.4.1
725 292 2013-07-03 17:45:00 3475 tophat2 3465 toolshed.g2.bx.psu.edu/repos/bjoern-gruening/trim_galore/trim_galore/0.2.4.1
726 292 2013-07-03 17:45:00 3475 tophat2 3465 toolshed.g2.bx.psu.edu/repos/bjoern-gruening/trim_galore/trim_galore/0.2.4.1
727 292 2013-07-03 17:45:00 3478 tophat2 3468 toolshed.g2.bx.psu.edu/repos/bjoern-gruening/trim_galore/trim_galore/0.2.4.1
728 292 2013-07-03 17:45:00 3478 tophat2 3468 toolshed.g2.bx.psu.edu/repos/bjoern-gruening/trim_galore/trim_galore/0.2.4.1
729 292 2013-07-03 17:45:00 3480 tophat2 3470 toolshed.g2.bx.psu.edu/repos/bjoern-gruening/trim_galore/trim_galore/0.2.4.1
730 292 2013-07-03 17:45:00 3480 tophat2 3470 toolshed.g2.bx.psu.edu/repos/bjoern-gruening/trim_galore/trim_galore/0.2.4.1
731 292 2013-07-03 17:45:00 3481 tophat2 3471 toolshed.g2.bx.psu.edu/repos/bjoern-gruening/trim_galore/trim_galore/0.2.4.1
732 292 2013-07-03 17:45:00 3481 tophat2 3471 toolshed.g2.bx.psu.edu/repos/bjoern-gruening/trim_galore/trim_galore/0.2.4.1
733 292 2013-07-03 17:45:00 3483 tophat2 3473 toolshed.g2.bx.psu.edu/repos/bjoern-gruening/trim_galore/trim_galore/0.2.4.1
734 292 2013-07-03 17:45:00 3483 tophat2 3473 toolshed.g2.bx.psu.edu/repos/bjoern-gruening/trim_galore/trim_galore/0.2.4.1
735 292 2013-07-03 17:45:00 3484 cufflinks 3474 tophat2
736 292 2013-07-03 17:45:00 3497 cuffdiff 3474 tophat2
737 292 2013-07-03 17:45:00 3499 cuffdiff 3474 tophat2
738 292 2013-07-03 17:45:00 3497 cuffdiff 3475 tophat2
739 292 2013-07-03 17:45:00 3499 cuffdiff 3475 tophat2
740 292 2013-07-03 17:45:00 3497 cuffdiff 3476 tophat2
741 292 2013-07-03 17:45:00 3499 cuffdiff 3476 tophat2
742 292 2013-07-03 17:45:00 3498 cuffdiff 3477 tophat2
743 292 2013-07-03 17:45:00 3488 cufflinks 3478 tophat2
744 292 2013-07-03 17:45:00 3498 cuffdiff 3478 tophat2
745 292 2013-07-03 17:45:00 3497 cuffdiff 3479 tophat2
746 292 2013-07-03 17:45:00 3499 cuffdiff 3479 tophat2
747 292 2013-07-03 17:45:00 3497 cuffdiff 3480 tophat2
748 292 2013-07-03 17:45:00 3499 cuffdiff 3480 tophat2
749 292 2013-07-03 17:45:00 3497 cuffdiff 3481 tophat2
750 292 2013-07-03 17:45:00 3499 cuffdiff 3481 tophat2
751 292 2013-07-03 17:45:00 3498 cuffdiff 3482 tophat2
752 292 2013-07-03 17:45:00 3495 cufflinks 3483 tophat2
753 292 2013-07-03 17:45:00 3498 cuffdiff 3483 tophat2
754 292 2013-07-03 17:45:00 3497 cuffdiff 3496 cuffmerge
755 292 2013-07-03 17:45:00 3498 cuffdiff 3496 cuffmerge
756 292 2013-07-03 17:45:00 3499 cuffdiff 3496 cuffmerge
757 295 2013-07-03 17:52:00 3526 cufflinks 0.0.5 3525 tophat2 0.5
758 296 2013-07-03 17:55:00 3529 tophat2 0.5 3528 toolshed.g2.bx.psu.edu/repos/bjoern-gruening/trim_galore/trim_galore/0.2.4.1 0.2.4.1
759 300 2013-07-03 19:48:00 3546 addValue 1.0.0 3545
760 314 2013-07-05 09:46:00 3639 Add_a_column1 1.1.0 3642
761 327 2013-07-10 07:51:00 3755 Filter1 1.1.0 3756
762 327 2013-07-10 07:51:00 3757 Filter1 1.1.0 3756
763 327 2013-07-10 07:51:00 3754 Summary_Statistics1 1.1.0 3757 Filter1 1.1.0
764 328 2013-07-10 08:24:00 3763 toolshed.g2.bx.psu.edu/repos/aaronquinlan/bedtools/bedtools_intersectbed_bam/0.1.0 0.1.0 3761 Filter1 1.1.0
765 328 2013-07-10 08:24:00 3758 Filter1 1.1.0 3764
766 328 2013-07-10 08:24:00 3763 toolshed.g2.bx.psu.edu/repos/aaronquinlan/bedtools/bedtools_intersectbed_bam/0.1.0 0.1.0 3765
767 334 2013-07-10 09:39:00 3799 Add_a_column1 1.1.0 3798 Filter1 1.1.0
768 334 2013-07-10 09:39:00 3802 Add_a_column1 1.1.0 3800 Filter1 1.1.0
769 334 2013-07-10 09:39:00 3803 cat1 1.0.0 3801 Cut1 1.0.2
770 334 2013-07-10 09:39:00 3804 Cut1 1.0.2 3802 Add_a_column1 1.1.0
771 334 2013-07-10 09:39:00 3803 cat1 1.0.0 3804 Cut1 1.0.2
772 334 2013-07-10 09:39:00 3805 Filter1 1.1.0 3806 Filter1 1.1.0
773 334 2013-07-10 09:39:00 3800 Filter1 1.1.0 3807
774 355 2013-07-15 13:11:00 4001 heatmapper 1.3 4004 Cut1 1.0.2
775 355 2013-07-15 13:11:00 4001 heatmapper 1.3 4007
776 358 2013-07-17 13:29:00 4024 toolshed.g2.bx.psu.edu/repos/aaronquinlan/bedtools/bedtools_intersectbed_bam/0.1.0 0.1.0 4025 toolshed.g2.bx.psu.edu/repos/aaronquinlan/bedtools/bedtools_intersectbed_bam/0.1.0 0.1.0
777 358 2013-07-17 13:29:00 4025 toolshed.g2.bx.psu.edu/repos/aaronquinlan/bedtools/bedtools_intersectbed_bam/0.1.0 0.1.0 4026 toolshed.g2.bx.psu.edu/repos/aaronquinlan/bedtools/bedtools_intersectbed_bam/0.1.0 0.1.0
778 358 2013-07-17 13:29:00 4025 toolshed.g2.bx.psu.edu/repos/aaronquinlan/bedtools/bedtools_intersectbed_bam/0.1.0 0.1.0 4027 toolshed.g2.bx.psu.edu/repos/aaronquinlan/bedtools/bedtools_intersectbed_bam/0.1.0 0.1.0
779 358 2013-07-17 13:29:00 4030 toolshed.g2.bx.psu.edu/repos/aaronquinlan/bedtools/bedtools_intersectbed_bam/0.1.0 0.1.0 4027 toolshed.g2.bx.psu.edu/repos/aaronquinlan/bedtools/bedtools_intersectbed_bam/0.1.0 0.1.0
780 358 2013-07-17 13:29:00 4030 toolshed.g2.bx.psu.edu/repos/aaronquinlan/bedtools/bedtools_intersectbed_bam/0.1.0 0.1.0 4029 toolshed.g2.bx.psu.edu/repos/aaronquinlan/bedtools/bedtools_intersectbed_bam/0.1.0 0.1.0
781 358 2013-07-17 13:29:00 4024 toolshed.g2.bx.psu.edu/repos/aaronquinlan/bedtools/bedtools_intersectbed_bam/0.1.0 0.1.0 4030 toolshed.g2.bx.psu.edu/repos/aaronquinlan/bedtools/bedtools_intersectbed_bam/0.1.0 0.1.0
782 358 2013-07-17 13:29:00 4026 toolshed.g2.bx.psu.edu/repos/aaronquinlan/bedtools/bedtools_intersectbed_bam/0.1.0 0.1.0 4032
783 358 2013-07-17 13:29:00 4026 toolshed.g2.bx.psu.edu/repos/aaronquinlan/bedtools/bedtools_intersectbed_bam/0.1.0 0.1.0 4033
784 359 2013-07-18 15:24:00 4038 bowtie2 0.1 4036 toolshed.g2.bx.psu.edu/repos/bjoern-gruening/trim_galore/trim_galore/0.2.4.1 0.2.4.1
785 371 2013-07-24 20:44:00 4191 wig_to_bigWig 1.1.0 4176 Filter1 1.1.0
786 371 2013-07-24 20:44:00 4178 wig_to_bigWig 1.1.0 4183 Filter1 1.1.0
787 371 2013-07-24 20:44:00 4177 wig_to_bigWig 1.1.0 4184 Filter1 1.1.0
788 371 2013-07-24 20:44:00 4172 wig_to_bigWig 1.1.0 4185 Filter1 1.1.0
789 371 2013-07-24 20:44:00 4173 wig_to_bigWig 1.1.0 4188 Filter1 1.1.0
790 371 2013-07-24 20:44:00 4175 wig_to_bigWig 1.1.0 4190 Filter1 1.1.0
791 371 2013-07-24 20:44:00 4203 wig_to_bigWig 1.1.0 4192 Filter1 1.1.0
792 371 2013-07-24 20:44:00 4209 wig_to_bigWig 1.1.0 4194 Filter1 1.1.0
793 371 2013-07-24 20:44:00 4208 wig_to_bigWig 1.1.0 4197 Filter1 1.1.0
794 371 2013-07-24 20:44:00 4184 Filter1 1.1.0 4210
795 371 2013-07-24 20:44:00 4188 Filter1 1.1.0 4210
796 371 2013-07-24 20:44:00 4200 Filter1 1.1.0 4210
797 375 2013-07-26 14:02:00 4287 heatmapper 1.3 4299
798 375 2013-07-26 14:02:00 4287 heatmapper 1.3 4300
799 375 2013-07-26 14:02:00 4289 heatmapper 1.3 4300
800 375 2013-07-26 14:02:00 4290 heatmapper 1.3 4300
801 375 2013-07-26 14:02:00 4291 heatmapper 1.3 4300
802 375 2013-07-26 14:02:00 4293 heatmapper 1.3 4300
803 375 2013-07-26 14:02:00 4294 heatmapper 1.3 4300
804 375 2013-07-26 14:02:00 4295 heatmapper 1.3 4300
805 375 2013-07-26 14:02:00 4296 heatmapper 1.3 4300
806 375 2013-07-26 14:02:00 4297 heatmapper 1.3 4300
807 375 2013-07-26 14:02:00 4289 heatmapper 1.3 4302
808 375 2013-07-26 14:02:00 4290 heatmapper 1.3 4303
809 375 2013-07-26 14:02:00 4291 heatmapper 1.3 4304
810 375 2013-07-26 14:02:00 4293 heatmapper 1.3 4306
811 375 2013-07-26 14:02:00 4294 heatmapper 1.3 4307
812 375 2013-07-26 14:02:00 4295 heatmapper 1.3 4308
813 375 2013-07-26 14:02:00 4296 heatmapper 1.3 4309
814 375 2013-07-26 14:02:00 4297 heatmapper 1.3 4310
815 380 2013-07-31 09:32:00 4349 samtools_rmdup 1.0.0 4346 bowtie2 0.1
816 380 2013-07-31 09:32:00 4348 bam2wig 1.3 4349 samtools_rmdup 1.0.0
817 392 2013-07-31 20:28:00 4430 mergeCols1 1.0.1 4426 addValue 1.0.0
818 392 2013-07-31 20:28:00 4432 addValue 1.0.0 4427 Filter1 1.1.0
819 392 2013-07-31 20:28:00 4434 mergeCols1 1.0.1 4429 addValue 1.0.0
820 392 2013-07-31 20:28:00 4423 Cut1 1.0.2 4434 mergeCols1 1.0.1
821 394 2013-08-01 09:49:00 4445 toolshed.g2.bx.psu.edu/repos/aaronquinlan/bedtools/bedtools_intersectbed_bam/0.1.0 0.1.0 4444 Filter1 1.1.0
822 394 2013-08-01 09:49:00 4448 cat1 1.0.0 4445 toolshed.g2.bx.psu.edu/repos/aaronquinlan/bedtools/bedtools_intersectbed_bam/0.1.0 0.1.0
823 394 2013-08-01 09:49:00 4448 cat1 1.0.0 4446 toolshed.g2.bx.psu.edu/repos/aaronquinlan/bedtools/bedtools_intersectbed_bam/0.1.0 0.1.0
824 394 2013-08-01 09:49:00 4447 toolshed.g2.bx.psu.edu/repos/aaronquinlan/bedtools/bedtools_intersectbed_bam/0.1.0 0.1.0 4448 cat1 1.0.0
825 394 2013-08-01 09:49:00 4444 Filter1 1.1.0 4449
826 394 2013-08-01 09:49:00 4445 toolshed.g2.bx.psu.edu/repos/aaronquinlan/bedtools/bedtools_intersectbed_bam/0.1.0 0.1.0 4450
827 394 2013-08-01 09:49:00 4447 toolshed.g2.bx.psu.edu/repos/aaronquinlan/bedtools/bedtools_intersectbed_bam/0.1.0 0.1.0 4451
828 397 2013-08-01 21:11:00 4469 toolshed.g2.bx.psu.edu/repos/aaronquinlan/bedtools/bedtools_intersectbed_bam/0.1.0 0.1.0 4468 toolshed.g2.bx.psu.edu/repos/aaronquinlan/bedtools/bedtools_intersectbed_bam/0.1.0 0.1.0
829 397 2013-08-01 21:11:00 4470 toolshed.g2.bx.psu.edu/repos/aaronquinlan/bedtools/bedtools_intersectbed_bam/0.1.0 0.1.0 4468 toolshed.g2.bx.psu.edu/repos/aaronquinlan/bedtools/bedtools_intersectbed_bam/0.1.0 0.1.0
830 397 2013-08-01 21:11:00 4469 toolshed.g2.bx.psu.edu/repos/aaronquinlan/bedtools/bedtools_intersectbed_bam/0.1.0 0.1.0 4473 smooth_running_window 0.1
831 397 2013-08-01 21:11:00 4470 toolshed.g2.bx.psu.edu/repos/aaronquinlan/bedtools/bedtools_intersectbed_bam/0.1.0 0.1.0 4473 smooth_running_window 0.1
832 397 2013-08-01 21:11:00 4473 smooth_running_window 0.1 4476
833 397 2013-08-01 21:11:00 4474 smooth_running_window 0.1 4477
834 402 2013-08-07 16:03:00 4502 bamCorrelate_deepTools 4499
835 402 2013-08-07 16:03:00 4502 bamCorrelate_deepTools 4500
836 416 2013-08-09 06:53:00 4589 bamCompare_deepTools 1 4594
837 416 2013-08-09 06:53:00 4589 bamCompare_deepTools 1 4595
838 416 2013-08-09 06:53:00 4590 Grep1 1.0.1 4596
839 418 2013-08-09 06:54:00 4603 bamFingerprint 1 4605
840 418 2013-08-09 06:54:00 4604 bamCorrelate_deepTools 1.0.1 4605
841 418 2013-08-09 06:54:00 4603 bamFingerprint 1 4606
842 418 2013-08-09 06:54:00 4604 bamCorrelate_deepTools 1.0.1 4606
843 421 2013-08-09 07:28:00 4618 computeMatrix 1 4617 bamCoverage_deepTools 1
844 421 2013-08-09 07:28:00 4618 computeMatrix 1 4619
845 421 2013-08-09 07:28:00 4617 bamCoverage_deepTools 1 4620
846 422 2013-08-09 07:32:00 4624 computeGCBias 1.0.1 4627
847 425 2013-08-20 12:23:00 4645 toolshed.g2.bx.psu.edu/repos/devteam/ncbi_blast_plus/ncbi_tblastn_wrapper/0.0.19 4643
848 425 2013-08-20 12:23:00 4648 toolshed.g2.bx.psu.edu/repos/devteam/ncbi_blast_plus/ncbi_tblastx_wrapper/0.0.19 4644
849 425 2013-08-20 12:23:00 4649 toolshed.g2.bx.psu.edu/repos/devteam/ncbi_blast_plus/ncbi_blastx_wrapper/0.0.19 4644
850 441 2013-08-28 22:32:00 4911 bowtie2 0.1 4912 toolshed.g2.bx.psu.edu/repos/bgruening/trim_galore/trim_galore/0.2.8.1 0.2.8.1
851 441 2013-08-28 22:32:00 4911 bowtie2 0.1 4912 toolshed.g2.bx.psu.edu/repos/bgruening/trim_galore/trim_galore/0.2.8.1 0.2.8.1
852 448 2013-09-06 13:03:00 4968 bowtie2 0.1 4969 toolshed.g2.bx.psu.edu/repos/bgruening/trim_galore/trim_galore/0.2.8.1 0.2.8.1
853 448 2013-09-06 13:03:00 4968 bowtie2 0.1 4969 toolshed.g2.bx.psu.edu/repos/bgruening/trim_galore/trim_galore/0.2.8.1 0.2.8.1
854 448 2013-09-06 13:03:00 4970 bam2wig 1.3 4971 samtools_rmdup 1.0.0
855 448 2013-09-06 13:03:00 4972 samtools_flagstat 1.0.0 4971 samtools_rmdup 1.0.0
856 448 2013-09-06 13:03:00 4969 toolshed.g2.bx.psu.edu/repos/bgruening/trim_galore/trim_galore/0.2.8.1 0.2.8.1 4973
857 448 2013-09-06 13:03:00 4969 toolshed.g2.bx.psu.edu/repos/bgruening/trim_galore/trim_galore/0.2.8.1 0.2.8.1 4974
858 449 2013-08-29 08:59:00 4980 bowtie2 0.1 4978 toolshed.g2.bx.psu.edu/repos/bgruening/trim_galore/trim_galore/0.2.8.1 0.2.8.1
859 449 2013-08-29 08:59:00 4980 bowtie2 0.1 4978 toolshed.g2.bx.psu.edu/repos/bgruening/trim_galore/trim_galore/0.2.8.1 0.2.8.1
860 449 2013-08-29 08:59:00 4976 samtools_rmdup 1.0.0 4982 sam_merge2 1.1.2
861 449 2013-08-29 08:59:00 4977 toolshed.g2.bx.psu.edu/repos/bgruening/trim_galore/trim_galore/0.2.8.1 0.2.8.1 4983
862 449 2013-08-29 08:59:00 4977 toolshed.g2.bx.psu.edu/repos/bgruening/trim_galore/trim_galore/0.2.8.1 0.2.8.1 4984
863 449 2013-08-29 08:59:00 4978 toolshed.g2.bx.psu.edu/repos/bgruening/trim_galore/trim_galore/0.2.8.1 0.2.8.1 4985
864 449 2013-08-29 08:59:00 4978 toolshed.g2.bx.psu.edu/repos/bgruening/trim_galore/trim_galore/0.2.8.1 0.2.8.1 4986
865 451 2013-09-05 19:05:00 4997 Cut1 1.0.2 4996 smooth_running_window 0.1
866 451 2013-09-05 19:05:00 4999 Cut1 1.0.2 4998 smooth_running_window 0.1
867 451 2013-09-05 19:05:00 5005 toolshed.g2.bx.psu.edu/repos/aaronquinlan/bedtools/bedtools_intersectbed_bam/0.1.0 0.1.0 5003 Filter1 1.1.0
868 451 2013-09-05 19:05:00 5005 toolshed.g2.bx.psu.edu/repos/aaronquinlan/bedtools/bedtools_intersectbed_bam/0.1.0 0.1.0 5004 Filter1 1.1.0
869 451 2013-09-05 19:05:00 5007 toolshed.g2.bx.psu.edu/repos/aaronquinlan/bedtools/bedtools_intersectbed_bam/0.1.0 0.1.0 5004 Filter1 1.1.0
870 451 2013-09-05 19:05:00 4993 toolshed.g2.bx.psu.edu/repos/aaronquinlan/bedtools/bedtools_intersectbed_bam/0.1.0 0.1.0 5006 Filter1 1.1.0
871 451 2013-09-05 19:05:00 4993 toolshed.g2.bx.psu.edu/repos/aaronquinlan/bedtools/bedtools_intersectbed_bam/0.1.0 0.1.0 5008 toolshed.g2.bx.psu.edu/repos/aaronquinlan/bedtools/bedtools_intersectbed_bam/0.1.0 0.1.0
872 451 2013-09-05 19:05:00 5007 toolshed.g2.bx.psu.edu/repos/aaronquinlan/bedtools/bedtools_intersectbed_bam/0.1.0 0.1.0 5008 toolshed.g2.bx.psu.edu/repos/aaronquinlan/bedtools/bedtools_intersectbed_bam/0.1.0 0.1.0
873 451 2013-09-05 19:05:00 5004 Filter1 1.1.0 5011
874 452 2013-09-06 13:03:00 5016 samtools_rmdup 1.0.0 5013 bowtie2 0.1
875 454 2013-09-11 09:15:00 5024 Cut1 1.0.2 5025 Add_a_column1 1.1.0
876 456 2013-09-12 14:07:00 5038 Cut1 1.0.2 5041 Add_a_column1 1.1.0
877 456 2013-09-12 14:07:00 5041 Add_a_column1 1.1.0 5042 Cut1 1.0.2
878 456 2013-09-12 14:07:00 5039 Add_a_column1 1.1.0 5043
879 457 2013-09-16 19:21:00 5045 samtools_rmdup 1.0.0 5046 bismark_bowtie 0.7.12
880 457 2013-09-16 19:21:00 5044 fastq_quality_trimmer 1.0.0 5047
881 458 2013-09-17 07:28:00 5051 methtools_destrand 0.1.1 5048 cshl_sort_header 0.1
882 458 2013-09-17 07:28:00 5050 smooth_running_window 0.1 5051 methtools_destrand 0.1.1
883 458 2013-09-17 07:28:00 5049 methtools_calling 0.1.1 5052
884 459 2013-09-18 08:54:00 5055 Summary_Statistics1 1.1.0 5054 Add_a_column1 1.1.0
885 459 2013-09-18 08:54:00 5058 gops_intersect_1 1.0.0 5059 Cut1 1.0.2
886 459 2013-09-18 08:54:00 5061 gops_intersect_1 1.0.0 5059 Cut1 1.0.2
887 459 2013-09-18 08:54:00 5062 Add_a_column1 1.1.0 5061 gops_intersect_1 1.0.0
888 459 2013-09-18 08:54:00 5053 Summary_Statistics1 1.1.0 5063 Add_a_column1 1.1.0
889 459 2013-09-18 08:54:00 5057 Summary_Statistics1 1.1.0 5064
890 459 2013-09-18 08:54:00 5058 gops_intersect_1 1.0.0 5065
891 459 2013-09-18 08:54:00 5061 gops_intersect_1 1.0.0 5067
892 483 2013-09-23 14:40:00 5191 cshl_awk_tool 1.0.0 5189
893 483 2013-09-23 14:40:00 5192 get_flanks1 1.0.0 5190
894 483 2013-09-23 14:40:00 5194 cshl_find_and_replace 1.0.0 5191 cshl_awk_tool 1.0.0
895 483 2013-09-23 14:40:00 5193 cshl_find_and_replace 1.0.0 5191 cshl_awk_tool 1.0.0
896 483 2013-09-23 14:40:00 5196 CONVERTER_interval_to_bed_0 1.0.0 5194 cshl_find_and_replace 1.0.0
897 483 2013-09-23 14:40:00 5197 barchart_gnuplot 1.0.0 5195 Count1 1.0.0
898 484 2013-09-23 14:40:00 5200 gops_intersect_1 1.0.0 5198
899 484 2013-09-23 14:40:00 5200 gops_intersect_1 1.0.0 5199
900 484 2013-09-23 14:40:00 5202 barchart_gnuplot 1.0.0 5201 Count1 1.0.0
901 486 2013-09-23 14:40:00 5210 gops_intersect_1 1.0.0 5208
902 486 2013-09-23 14:40:00 5210 gops_intersect_1 1.0.0 5209
903 486 2013-09-23 14:40:00 5211 Count1 1.0.0 5210 gops_intersect_1 1.0.0
904 488 2013-09-23 14:41:00 5221 Count1 1.0.0 5220 gops_intersect_1 1.0.0
905 488 2013-09-23 14:41:00 5222 barchart_gnuplot 1.0.0 5221 Count1 1.0.0
906 489 2013-09-23 14:41:00 5225 gops_intersect_1 1.0.0 5223
907 489 2013-09-23 14:41:00 5225 gops_intersect_1 1.0.0 5224
908 489 2013-09-23 14:41:00 5226 Count1 1.0.0 5225 gops_intersect_1 1.0.0
909 490 2013-09-23 14:41:00 5231 Count1 1.0.0 5230 gops_intersect_1 1.0.0
910 490 2013-09-23 14:41:00 5232 barchart_gnuplot 1.0.0 5231 Count1 1.0.0
911 491 2013-09-23 14:42:00 5235 gops_intersect_1 1.0.0 5233
912 491 2013-09-23 14:42:00 5235 gops_intersect_1 1.0.0 5234
913 491 2013-09-23 14:42:00 5236 Count1 1.0.0 5235 gops_intersect_1 1.0.0
914 491 2013-09-23 14:42:00 5237 barchart_gnuplot 1.0.0 5236 Count1 1.0.0
915 492 2013-09-23 14:41:00 5240 gops_intersect_1 1.0.0 5238
916 492 2013-09-23 14:41:00 5240 gops_intersect_1 1.0.0 5239
917 492 2013-09-23 14:41:00 5241 Count1 1.0.0 5240 gops_intersect_1 1.0.0
918 493 2013-09-23 14:41:00 5247 barchart_gnuplot 1.0.0 5246 Count1 1.0.0
919 494 2013-09-23 14:41:00 5251 Count1 1.0.0 5250 gops_intersect_1 1.0.0
920 494 2013-09-23 14:41:00 5252 barchart_gnuplot 1.0.0 5251 Count1 1.0.0
921 495 2013-09-23 14:41:00 5254 Count1 1.0.0 5253 gops_intersect_1 1.0.0
922 495 2013-09-23 14:41:00 5257 barchart_gnuplot 1.0.0 5254 Count1 1.0.0
923 496 2013-09-23 15:20:00 5262 barchart_gnuplot 1.0.0 5261 Count1 1.0.0
924 501 2014-09-11 09:03:00 5279 sort1 1.0.2 5278 Cut1 1.0.2
925 501 2014-09-11 09:03:00 5280 cshl_uniq_tool 1.0.0 5279 sort1 1.0.2
926 502 2013-09-23 15:30:00 5282 Cut1 1.0.2 5281
927 502 2013-09-23 15:30:00 5283 cshl_sort_header 0.1 5282 Cut1 1.0.2
928 506 2013-09-23 15:32:00 5298 Cut1 1.0.2 5297
929 506 2013-09-23 15:32:00 5299 cshl_uniq_tool 1.0.0 5298 Cut1 1.0.2
930 506 2013-09-23 15:32:00 5300 sort1 1.0.2 5299 cshl_uniq_tool 1.0.0
931 507 2013-09-23 15:33:00 5303 sort1 1.0.2 5302 Cut1 1.0.2
932 508 2013-09-23 15:34:00 5310 gops_intersect_1 5306 cshl_find_and_replace
933 508 2013-09-23 15:34:00 5308 Add_a_column1 5307 Add_a_column1
934 508 2013-09-23 15:34:00 5309 Cut1 5308 Add_a_column1
935 508 2013-09-23 15:34:00 5310 gops_intersect_1 5309 Cut1
936 508 2013-09-23 15:34:00 5312 Cut1 5310 gops_intersect_1
937 508 2013-09-23 15:34:00 5313 barchart_gnuplot 5311 Count1
938 508 2013-09-23 15:34:00 5314 cshl_uniq_tool 5312 Cut1
939 511 2013-09-23 15:37:00 5325 cshl_sort_header 0.1 5326 Cut1 1.0.2
940 511 2013-09-23 15:37:00 5326 Cut1 1.0.2 5327
941 514 2013-09-25 15:28:00 5470 fastq_quality_trimmer 1.0.0 5449
942 514 2013-09-25 15:28:00 5471 fastq_quality_trimmer 1.0.0 5450
943 514 2013-09-25 15:28:00 5473 fastq_quality_trimmer 1.0.0 5452
944 514 2013-09-25 15:28:00 5474 smooth_running_window 0.1 5452
945 514 2013-09-25 15:28:00 5476 fastq_quality_trimmer 1.0.0 5454
946 514 2013-09-25 15:28:00 5478 fastq_quality_trimmer 1.0.0 5456
947 514 2013-09-25 15:28:00 5481 fastq_quality_trimmer 1.0.0 5459
948 514 2013-09-25 15:28:00 5485 fastq_quality_trimmer 1.0.0 5462
949 514 2013-09-25 15:28:00 5489 bismark_bowtie 0.7.12 5469 fastq_quality_trimmer 1.0.0
950 514 2013-09-25 15:28:00 5492 bismark_bowtie 0.7.12 5472 fastq_quality_trimmer 1.0.0
951 514 2013-09-25 15:28:00 5494 bismark_bowtie 0.7.12 5475 fastq_quality_trimmer 1.0.0
952 514 2013-09-25 15:28:00 5499 bismark_bowtie 0.7.12 5480 fastq_quality_trimmer 1.0.0
953 514 2013-09-25 15:28:00 5500 bismark_bowtie 0.7.12 5481 fastq_quality_trimmer 1.0.0
954 514 2013-09-25 15:28:00 5501 bismark_bowtie 0.7.12 5482 fastq_quality_trimmer 1.0.0
955 514 2013-09-25 15:28:00 5502 bismark_bowtie 0.7.12 5484 fastq_quality_trimmer 1.0.0
956 514 2013-09-25 15:28:00 5505 samtools_rmdup 1.0.0 5489 bismark_bowtie 0.7.12
957 514 2013-09-25 15:28:00 5506 samtools_rmdup 1.0.0 5490 bismark_bowtie 0.7.12
958 514 2013-09-25 15:28:00 5507 samtools_rmdup 1.0.0 5491 bismark_bowtie 0.7.12
959 514 2013-09-25 15:28:00 5508 samtools_rmdup 1.0.0 5492 bismark_bowtie 0.7.12
960 514 2013-09-25 15:28:00 5509 samtools_rmdup 1.0.0 5493 bismark_bowtie 0.7.12
961 514 2013-09-25 15:28:00 5510 samtools_rmdup 1.0.0 5494 bismark_bowtie 0.7.12
962 514 2013-09-25 15:28:00 5512 samtools_rmdup 1.0.0 5496 bismark_bowtie 0.7.12
963 514 2013-09-25 15:28:00 5516 samtools_rmdup 1.0.0 5500 bismark_bowtie 0.7.12
964 514 2013-09-25 15:28:00 5521 sam_merge2 1.1.2 5505 samtools_rmdup 1.0.0
965 514 2013-09-25 15:28:00 5521 sam_merge2 1.1.2 5506 samtools_rmdup 1.0.0
966 514 2013-09-25 15:28:00 5521 sam_merge2 1.1.2 5507 samtools_rmdup 1.0.0
967 514 2013-09-25 15:28:00 5521 sam_merge2 1.1.2 5508 samtools_rmdup 1.0.0
968 514 2013-09-25 15:28:00 5521 sam_merge2 1.1.2 5509 samtools_rmdup 1.0.0
969 514 2013-09-25 15:28:00 5521 sam_merge2 1.1.2 5510 samtools_rmdup 1.0.0
970 514 2013-09-25 15:28:00 5521 sam_merge2 1.1.2 5511 samtools_rmdup 1.0.0
971 514 2013-09-25 15:28:00 5521 sam_merge2 1.1.2 5512 samtools_rmdup 1.0.0
972 514 2013-09-25 15:28:00 5521 sam_merge2 1.1.2 5513 samtools_rmdup 1.0.0
973 514 2013-09-25 15:28:00 5521 sam_merge2 1.1.2 5514 samtools_rmdup 1.0.0
974 514 2013-09-25 15:28:00 5521 sam_merge2 1.1.2 5515 samtools_rmdup 1.0.0
975 514 2013-09-25 15:28:00 5521 sam_merge2 1.1.2 5516 samtools_rmdup 1.0.0
976 514 2013-09-25 15:28:00 5521 sam_merge2 1.1.2 5517 samtools_rmdup 1.0.0
977 514 2013-09-25 15:28:00 5521 sam_merge2 1.1.2 5518 samtools_rmdup 1.0.0
978 514 2013-09-25 15:28:00 5521 sam_merge2 1.1.2 5519 samtools_rmdup 1.0.0
979 514 2013-09-25 15:28:00 5524 methtools_destrand 0.1.1 5523 cshl_sort_header 0.1
980 514 2013-09-25 15:28:00 5525 smooth_running_window 0.1 5524 methtools_destrand 0.1.1
981 514 2013-09-25 15:28:00 5528 toolshed.g2.bx.psu.edu/repos/aaronquinlan/bedtools/bedtools_intersectbed_bam/0.1.0 0.1.0 5525 smooth_running_window 0.1
982 514 2013-09-25 15:28:00 5529 toolshed.g2.bx.psu.edu/repos/aaronquinlan/bedtools/bedtools_intersectbed_bam/0.1.0 0.1.0 5525 smooth_running_window 0.1
983 514 2013-09-25 15:28:00 5530 methtools_filter 0.1.1 5526 toolshed.g2.bx.psu.edu/repos/aaronquinlan/bedtools/bedtools_intersectbed_bam/0.1.0 0.1.0
984 514 2013-09-25 15:28:00 5530 methtools_filter 0.1.1 5527 toolshed.g2.bx.psu.edu/repos/aaronquinlan/bedtools/bedtools_intersectbed_bam/0.1.0 0.1.0
985 514 2013-09-25 15:28:00 5531 methtools_filter 0.1.1 5528 toolshed.g2.bx.psu.edu/repos/aaronquinlan/bedtools/bedtools_intersectbed_bam/0.1.0 0.1.0
986 514 2013-09-25 15:28:00 5531 methtools_filter 0.1.1 5529 toolshed.g2.bx.psu.edu/repos/aaronquinlan/bedtools/bedtools_intersectbed_bam/0.1.0 0.1.0
987 514 2013-09-25 15:28:00 5536 addValue 1.0.0 5532 methtools_dmr 0.1.1
988 514 2013-09-25 15:28:00 5535 Summary_Statistics1 1.1.0 5532 methtools_dmr 0.1.1
989 514 2013-09-25 15:28:00 5542 mergeCols1 1.0.1 5536 addValue 1.0.0
990 514 2013-09-25 15:28:00 5544 Filter1 1.1.0 5537 toolshed.g2.bx.psu.edu/repos/aaronquinlan/bedtools/bedtools_intersectbed_bam/0.1.0 0.1.0
991 514 2013-09-25 15:28:00 5546 toolshed.g2.bx.psu.edu/repos/aaronquinlan/bedtools/bedtools_intersectbed_bam/0.1.0 0.1.0 5538 Cut1 1.0.2
992 514 2013-09-25 15:28:00 5549 Summary_Statistics1 1.1.0 5540 Filter1 1.1.0
993 514 2013-09-25 15:28:00 5554 Summary_Statistics1 1.1.0 5544 Filter1 1.1.0
994 514 2013-09-25 15:28:00 5555 addValue 1.0.0 5544 Filter1 1.1.0
995 514 2013-09-25 15:28:00 5557 Summary_Statistics1 1.1.0 5545 Filter1 1.1.0
996 514 2013-09-25 15:28:00 5559 mergeCols1 1.0.1 5550 addValue 1.0.0
997 514 2013-09-25 15:28:00 5560 mergeCols1 1.0.1 5551 addValue 1.0.0
998 514 2013-09-25 15:28:00 5563 mergeCols1 1.0.1 5556 addValue 1.0.0
999 514 2013-09-25 15:28:00 5564 Cut1 1.0.2 5559 mergeCols1 1.0.1
1000 514 2013-09-25 15:28:00 5565 Cut1 1.0.2 5560 mergeCols1 1.0.1
1001 514 2013-09-25 15:28:00 5566 Cut1 1.0.2 5562 mergeCols1 1.0.1
1002 514 2013-09-25 15:28:00 5567 Cut1 1.0.2 5563 mergeCols1 1.0.1
1003 516 2013-09-26 10:59:00 5574 Cut1 1.0.2 5575 Add_a_column1 1.1.0
1004 529 2013-09-26 15:26:00 6048 Add_a_column1 1.1.0 6046 Filter1 1.1.0
1005 529 2013-09-26 15:26:00 6049 wig_to_bigWig 1.1.0 6047 Cut1 1.0.2
1006 530 2013-09-26 15:34:00 6055 Filter1 1.1.0 6052
1007 530 2013-09-26 15:34:00 6061 toolshed.g2.bx.psu.edu/repos/aaronquinlan/bedtools/bedtools_intersectbed_bam/0.1.0 0.1.0 6052
1008 530 2013-09-26 15:34:00 6056 Cut1 1.0.2 6053
1009 530 2013-09-26 15:34:00 6057 cshl_sort_header 0.1 6054 methtools_calling 0.1.1
1010 530 2013-09-26 15:34:00 6059 Add_a_column1 1.1.0 6055 Filter1 1.1.0
1011 530 2013-09-26 15:34:00 6077 computeMatrix 1 6056 Cut1 1.0.2
1012 530 2013-09-26 15:34:00 6065 toolshed.g2.bx.psu.edu/repos/aaronquinlan/bedtools/bedtools_intersectbed_bam/0.1.0 0.1.0 6056 Cut1 1.0.2
1013 530 2013-09-26 15:34:00 6082 computeMatrix 1 6056 Cut1 1.0.2
1014 530 2013-09-26 15:34:00 6061 toolshed.g2.bx.psu.edu/repos/aaronquinlan/bedtools/bedtools_intersectbed_bam/0.1.0 0.1.0 6057 cshl_sort_header 0.1
1015 530 2013-09-26 15:34:00 6064 cshl_uniq_tool 1.0.0 6058 cshl_sort_header 0.1
1016 530 2013-09-26 15:34:00 6065 toolshed.g2.bx.psu.edu/repos/aaronquinlan/bedtools/bedtools_intersectbed_bam/0.1.0 0.1.0 6058 cshl_sort_header 0.1
1017 530 2013-09-26 15:34:00 6075 methtools_plot 0.1.1 6061 toolshed.g2.bx.psu.edu/repos/aaronquinlan/bedtools/bedtools_intersectbed_bam/0.1.0 0.1.0
1018 530 2013-09-26 15:34:00 6068 Add_a_column1 1.1.0 6062 Filter1 1.1.0
1019 530 2013-09-26 15:34:00 6075 methtools_plot 0.1.1 6063 toolshed.g2.bx.psu.edu/repos/aaronquinlan/bedtools/bedtools_intersectbed_bam/0.1.0 0.1.0
1020 530 2013-09-26 15:34:00 6069 Cut1 1.0.2 6063 toolshed.g2.bx.psu.edu/repos/aaronquinlan/bedtools/bedtools_intersectbed_bam/0.1.0 0.1.0
1021 530 2013-09-26 15:34:00 6071 Filter1 1.1.0 6064 cshl_uniq_tool 1.0.0
1022 530 2013-09-26 15:34:00 6086 computeMatrix 1 6065 toolshed.g2.bx.psu.edu/repos/aaronquinlan/bedtools/bedtools_intersectbed_bam/0.1.0 0.1.0
1023 530 2013-09-26 15:34:00 6073 Cut1 1.0.2 6068 Add_a_column1 1.1.0
1024 530 2013-09-26 15:34:00 6075 methtools_plot 0.1.1 6070 methtools_dmr 0.1.1
1025 530 2013-09-26 15:34:00 6076 Add_a_column1 1.1.0 6071 Filter1 1.1.0
1026 530 2013-09-26 15:34:00 6077 computeMatrix 1 6072 wig_to_bigWig 1.1.0
1027 530 2013-09-26 15:34:00 6078 wig_to_bigWig 1.1.0 6073 Cut1 1.0.2
1028 530 2013-09-26 15:34:00 6080 Cut1 1.0.2 6076 Add_a_column1 1.1.0
1029 530 2013-09-26 15:34:00 6082 computeMatrix 1 6078 wig_to_bigWig 1.1.0
1030 530 2013-09-26 15:34:00 6083 wig_to_bigWig 1.1.0 6080 Cut1 1.0.2
1031 530 2013-09-26 15:34:00 6086 computeMatrix 1 6083 wig_to_bigWig 1.1.0
1032 530 2013-09-26 15:34:00 6087 heatmapper_deepTools 1 6085 computeMatrix 1
1033 532 2013-09-27 13:06:00 6097 CONVERTER_interval_to_bedstrict_0 1.0.0 6096
1034 533 2013-09-27 15:05:00 6111 computeMatrix 6109 toolshed.g2.bx.psu.edu/repos/ryo-tas/macs14/peakcalling_macs14/1.4.1
1035 533 2013-09-27 15:05:00 6111 computeMatrix 6110 bamCompare_deepTools
1036 534 2013-10-01 14:58:00 6132 tophat2 6115
1037 534 2013-10-01 14:58:00 6132 tophat2 6116
1038 534 2013-10-01 14:58:00 6134 fastqc 6120
1039 534 2013-10-01 14:58:00 6136 Cut1 6126
1040 534 2013-10-01 14:58:00 6139 cufflinks 6133 tophat2
1041 534 2013-10-01 14:58:00 6141 Show beginning1 6138 Cut1
1042 534 2013-10-01 14:58:00 6142 Show tail1 6138 Cut1
1043 534 2013-10-01 14:58:00 6143 cshl_sort_header 6140 cuffdiff
1044 534 2013-10-01 14:58:00 6146 cshl_sort_header 6145 Cut1
1045 535 2013-10-07 15:54:00 6152 ctb_change_title 0.0.1 6148 ctb_online_data_fetch 0.2
1046 535 2013-10-07 15:54:00 6153 Filter1 1.1.0 6149 ctb_online_data_fetch 0.2
1047 535 2013-10-07 15:54:00 6155 Filter1 1.1.0 6151 ctb_pubchem_download_as_smiles 1.0.0
1048 535 2013-10-07 15:54:00 6156 ctb_compound_convert 0.1 6152 ctb_change_title 0.0.1
1049 535 2013-10-07 15:54:00 6163 addValue 1.0.0 6159 ctb_compound_convert 0.1
1050 535 2013-10-07 15:54:00 6164 bg_uniq 0.3 6160 addValue 1.0.0
1051 535 2013-10-07 15:54:00 6170 Cut1 1.0.2 6169 mergeCols1 1.0.1
1052 535 2013-10-07 15:54:00 6171 Filter1 1.1.0 6170 Cut1 1.0.2
1053 535 2013-10-07 15:54:00 6173 bg_uniq 0.3 6172 sed_stream_editor 0.0.1
1054 535 2013-10-07 15:54:00 6176 bg_uniq 0.3 6175 Grep1 1.0.1
1055 538 2013-10-10 11:07:00 6210 Extract_features1 1.0.0 6209 Filter1 1.1.0
1056 542 2013-10-15 14:55:00 6233 Filter1 1.1.0 6231
1057 542 2013-10-15 14:55:00 6234 heatmapper 1.3 6232
1058 542 2013-10-15 14:55:00 6234 heatmapper 1.3 6233 Filter1 1.1.0
1059 542 2013-10-15 14:55:00 6235 Remove beginning1 1.0.0 6234 heatmapper 1.3
1060 542 2013-10-15 14:55:00 6236 Remove_ending 1.0.0 6235 Remove beginning1 1.0.0
1061 558 2013-10-18 12:48:00 6666 toolshed.g2.bx.psu.edu/repos/devteam/ncbi_blast_plus/ncbi_blastn_wrapper/0.0.20 0.0.20 6665
1062 558 2013-10-18 12:48:00 6667 toolshed.g2.bx.psu.edu/repos/devteam/ncbi_blast_plus/blastxml_to_tabular/0.0.11 0.0.11 6666 toolshed.g2.bx.psu.edu/repos/devteam/ncbi_blast_plus/ncbi_blastn_wrapper/0.0.20 0.0.20
1063 573 2013-10-21 07:49:00 10901 Remove beginning1 1.0.0 10826 heatmapper 1.3
1064 573 2013-10-21 07:49:00 10902 Remove beginning1 1.0.0 10827 heatmapper 1.3
1065 573 2013-10-21 07:49:00 10999 Remove beginning1 1.0.0 10831 heatmapper 1.3
1066 573 2013-10-21 07:49:00 10916 heatmapper 1.3 10835 Filter1 1.1.0
1067 573 2013-10-21 07:49:00 10906 heatmapper 1.3 10837 Filter1 1.1.0
1068 573 2013-10-21 07:49:00 11009 heatmapper 1.3 10838 Filter1 1.1.0
1069 573 2013-10-21 07:49:00 10876 Filter1 1.1.0 10839 cshl_word_list_grep 1.0.0
1070 573 2013-10-21 07:49:00 10878 Filter1 1.1.0 10839 cshl_word_list_grep 1.0.0
1071 573 2013-10-21 07:49:00 10882 Filter1 1.1.0 10839 cshl_word_list_grep 1.0.0
1072 573 2013-10-21 07:49:00 10965 Filter1 1.1.0 10840 cshl_word_list_grep 1.0.0
1073 573 2013-10-21 07:49:00 10969 Filter1 1.1.0 10840 cshl_word_list_grep 1.0.0
1074 573 2013-10-21 07:49:00 10972 Filter1 1.1.0 10840 cshl_word_list_grep 1.0.0
1075 573 2013-10-21 07:49:00 10973 Filter1 1.1.0 10840 cshl_word_list_grep 1.0.0
1076 573 2013-10-21 07:49:00 11083 Filter1 1.1.0 10841 cshl_word_list_grep 1.0.0
1077 573 2013-10-21 07:49:00 11085 Filter1 1.1.0 10841 cshl_word_list_grep 1.0.0
1078 573 2013-10-21 07:49:00 11086 Filter1 1.1.0 10841 cshl_word_list_grep 1.0.0
1079 573 2013-10-21 07:49:00 11089 Filter1 1.1.0 10841 cshl_word_list_grep 1.0.0
1080 573 2013-10-21 07:49:00 10914 Filter1 1.1.0 10842 cshl_word_list_grep 1.0.0
1081 573 2013-10-21 07:49:00 11091 Filter1 1.1.0 10842 cshl_word_list_grep 1.0.0
1082 573 2013-10-21 07:49:00 10963 Remove_ending 1.0.0 10846 Remove beginning1 1.0.0
1083 573 2013-10-21 07:49:00 11020 Cut1 1.0.2 10850 Filter1 1.1.0
1084 573 2013-10-21 07:49:00 10885 Paste1 1.0.0 10853 Cut1 1.0.2
1085 573 2013-10-21 07:49:00 10847 Paste1 1.0.0 10856 Paste1 1.0.0
1086 573 2013-10-21 07:49:00 10995 Remove beginning1 1.0.0 10864 heatmapper 1.3
1087 573 2013-10-21 07:49:00 10997 Remove beginning1 1.0.0 10867 heatmapper 1.3
1088 573 2013-10-21 07:49:00 11006 Remove_ending 1.0.0 10872 Remove beginning1 1.0.0
1089 573 2013-10-21 07:49:00 10861 heatmapper 1.3 10874 Filter1 1.1.0
1090 573 2013-10-21 07:49:00 10860 heatmapper 1.3 10875 Filter1 1.1.0
1091 573 2013-10-21 07:49:00 11028 heatmapper 1.3 10877 Filter1 1.1.0
1092 573 2013-10-21 07:49:00 10857 heatmapper 1.3 10878 Filter1 1.1.0
1093 573 2013-10-21 07:49:00 10873 heatmapper 1.3 10879 Filter1 1.1.0
1094 573 2013-10-21 07:49:00 10904 heatmapper 1.3 10880 Filter1 1.1.0
1095 573 2013-10-21 07:49:00 11106 Paste1 1.0.0 10885 Paste1 1.0.0
1096 573 2013-10-21 07:49:00 11106 Paste1 1.0.0 10886 Cut1 1.0.2
1097 573 2013-10-21 07:49:00 10885 Paste1 1.0.0 10887 Paste1 1.0.0
1098 573 2013-10-21 07:49:00 11093 Remove_ending 1.0.0 10891 Remove beginning1 1.0.0
1099 573 2013-10-21 07:49:00 10937 Remove_ending 1.0.0 10893 Remove beginning1 1.0.0
1100 573 2013-10-21 07:49:00 10921 Remove_ending 1.0.0 10896 Remove beginning1 1.0.0
1101 573 2013-10-21 07:49:00 10884 Remove_ending 1.0.0 10897 Remove beginning1 1.0.0
1102 573 2013-10-21 07:49:00 10985 Remove_ending 1.0.0 10899 Remove beginning1 1.0.0
1103 573 2013-10-21 07:49:00 10961 Remove_ending 1.0.0 10900 Remove beginning1 1.0.0
1104 573 2013-10-21 07:49:00 10927 Remove_ending 1.0.0 10902 Remove beginning1 1.0.0
1105 573 2013-10-21 07:49:00 11081 Remove beginning1 1.0.0 10905 heatmapper 1.3
1106 573 2013-10-21 07:49:00 10976 heatmapper 1.3 10910 heatmapper 1.3
1107 573 2013-10-21 07:49:00 10977 Remove beginning1 1.0.0 10910 heatmapper 1.3
1108 573 2013-10-21 07:49:00 11072 heatmapper 1.3 10911 Filter1 1.1.0
1109 573 2013-10-21 07:49:00 11080 Remove beginning1 1.0.0 10916 heatmapper 1.3
1110 573 2013-10-21 07:49:00 11070 heatmapper 1.3 10917 Filter1 1.1.0
1111 573 2013-10-21 07:49:00 11042 cat1 1.0.0 10919 Remove_ending 1.0.0
1112 573 2013-10-21 07:49:00 11099 Remove_ending 1.0.0 10920 Remove beginning1 1.0.0
1113 573 2013-10-21 07:49:00 11017 Cut1 1.0.2 10925 Filter1 1.1.0
1114 573 2013-10-21 07:49:00 11045 Remove_ending 1.0.0 10926 Remove beginning1 1.0.0
1115 573 2013-10-21 07:49:00 11042 cat1 1.0.0 10927 Remove_ending 1.0.0
1116 573 2013-10-21 07:49:00 11042 cat1 1.0.0 10929 Remove_ending 1.0.0
1117 573 2013-10-21 07:49:00 11056 Cut1 1.0.2 10930 cat1 1.0.0
1118 573 2013-10-21 07:49:00 11005 Remove beginning1 1.0.0 10935 heatmapper 1.3
1119 573 2013-10-21 07:49:00 10852 Remove beginning1 1.0.0 10941 heatmapper 1.3
1120 573 2013-10-21 07:49:00 10890 Remove beginning1 1.0.0 10942 heatmapper 1.3
1121 573 2013-10-21 07:49:00 10819 Remove beginning1 1.0.0 10947 heatmapper 1.3
1122 573 2013-10-21 07:49:00 10941 heatmapper 1.3 10949 Filter1 1.1.0
1123 573 2013-10-21 07:49:00 10944 heatmapper 1.3 10950 Filter1 1.1.0
1124 573 2013-10-21 07:49:00 11015 heatmapper 1.3 10951 Filter1 1.1.0
1125 573 2013-10-21 07:49:00 11012 heatmapper 1.3 10952 Filter1 1.1.0
1126 573 2013-10-21 07:49:00 11010 heatmapper 1.3 10954 Filter1 1.1.0
1127 573 2013-10-21 07:49:00 11003 heatmapper 1.3 10957 Filter1 1.1.0
1128 573 2013-10-21 07:49:00 11042 cat1 1.0.0 10959 Remove_ending 1.0.0
1129 573 2013-10-21 07:49:00 10847 Paste1 1.0.0 10960 Cut1 1.0.2
1130 573 2013-10-21 07:49:00 11042 cat1 1.0.0 10961 Remove_ending 1.0.0
1131 573 2013-10-21 07:49:00 11101 Remove_ending 1.0.0 10962 Remove beginning1 1.0.0
1132 573 2013-10-21 07:49:00 10862 heatmapper 1.3 10965 Filter1 1.1.0
1133 573 2013-10-21 07:49:00 10866 heatmapper 1.3 10969 Filter1 1.1.0
1134 573 2013-10-21 07:49:00 10867 heatmapper 1.3 10970 Filter1 1.1.0
1135 573 2013-10-21 07:49:00 10869 heatmapper 1.3 10972 Filter1 1.1.0
1136 573 2013-10-21 07:49:00 10827 heatmapper 1.3 10973 Filter1 1.1.0
1137 573 2013-10-21 07:49:00 11050 Remove_ending 1.0.0 10975 Remove beginning1 1.0.0
1138 573 2013-10-21 07:49:00 11048 Remove_ending 1.0.0 10977 Remove beginning1 1.0.0
1139 573 2013-10-21 07:49:00 11043 Remove_ending 1.0.0 10978 Remove beginning1 1.0.0
1140 573 2013-10-21 07:49:00 11053 Remove_ending 1.0.0 10980 Remove beginning1 1.0.0
1141 573 2013-10-21 07:49:00 10821 Remove_ending 1.0.0 10981 Remove beginning1 1.0.0
1142 573 2013-10-21 07:49:00 11042 cat1 1.0.0 10985 Remove_ending 1.0.0
1143 573 2013-10-21 07:49:00 11042 cat1 1.0.0 10986 Remove_ending 1.0.0
1144 573 2013-10-21 07:49:00 10934 Remove_ending 1.0.0 10987 Remove beginning1 1.0.0
1145 573 2013-10-21 07:49:00 10933 Remove_ending 1.0.0 10988 Remove beginning1 1.0.0
1146 573 2013-10-21 07:49:00 11055 Remove_ending 1.0.0 10990 Remove beginning1 1.0.0
1147 573 2013-10-21 07:49:00 11094 Remove_ending 1.0.0 10991 Remove beginning1 1.0.0
1148 573 2013-10-21 07:49:00 10959 Remove_ending 1.0.0 10992 Remove beginning1 1.0.0
1149 573 2013-10-21 07:49:00 11018 Cut1 1.0.2 10993 Filter1 1.1.0
1150 573 2013-10-21 07:49:00 10986 Remove_ending 1.0.0 10995 Remove beginning1 1.0.0
1151 573 2013-10-21 07:49:00 10843 Remove beginning1 1.0.0 11002 heatmapper 1.3
1152 573 2013-10-21 07:49:00 11040 Remove beginning1 1.0.0 11003 heatmapper 1.3
1153 573 2013-10-21 07:49:00 11051 Remove_ending 1.0.0 11004 Remove beginning1 1.0.0
1154 573 2013-10-21 07:49:00 11052 Remove_ending 1.0.0 11005 Remove beginning1 1.0.0
1155 573 2013-10-21 07:49:00 11037 Remove beginning1 1.0.0 11010 heatmapper 1.3
1156 573 2013-10-21 07:49:00 11036 Remove beginning1 1.0.0 11013 heatmapper 1.3
1157 573 2013-10-21 07:49:00 11038 Remove beginning1 1.0.0 11015 heatmapper 1.3
1158 573 2013-10-21 07:49:00 11022 cshl_word_list_grep 1.0.0 11017 Cut1 1.0.2
1159 573 2013-10-21 07:49:00 10840 cshl_word_list_grep 1.0.0 11021 Cut1 1.0.2
1160 573 2013-10-21 07:49:00 10835 Filter1 1.1.0 11022 cshl_word_list_grep 1.0.0
1161 573 2013-10-21 07:49:00 10837 Filter1 1.1.0 11022 cshl_word_list_grep 1.0.0
1162 573 2013-10-21 07:49:00 10845 Filter1 1.1.0 11022 cshl_word_list_grep 1.0.0
1163 573 2013-10-21 07:49:00 10952 Filter1 1.1.0 11022 cshl_word_list_grep 1.0.0
1164 573 2013-10-21 07:49:00 10954 Filter1 1.1.0 11022 cshl_word_list_grep 1.0.0
1165 573 2013-10-21 07:49:00 11057 Filter1 1.1.0 11024 cshl_word_list_grep 1.0.0
1166 573 2013-10-21 07:49:00 11058 Filter1 1.1.0 11024 cshl_word_list_grep 1.0.0
1167 573 2013-10-21 07:49:00 11059 Filter1 1.1.0 11024 cshl_word_list_grep 1.0.0
1168 573 2013-10-21 07:49:00 11060 Filter1 1.1.0 11024 cshl_word_list_grep 1.0.0
1169 573 2013-10-21 07:49:00 11061 Filter1 1.1.0 11024 cshl_word_list_grep 1.0.0
1170 573 2013-10-21 07:49:00 11062 Filter1 1.1.0 11024 cshl_word_list_grep 1.0.0
1171 573 2013-10-21 07:49:00 11064 Filter1 1.1.0 11024 cshl_word_list_grep 1.0.0
1172 573 2013-10-21 07:49:00 10955 Filter1 1.1.0 11025 cshl_word_list_grep 1.0.0
1173 573 2013-10-21 07:49:00 11065 Filter1 1.1.0 11025 cshl_word_list_grep 1.0.0
1174 573 2013-10-21 07:49:00 11066 Filter1 1.1.0 11025 cshl_word_list_grep 1.0.0
1175 573 2013-10-21 07:49:00 10893 Remove beginning1 1.0.0 11026 heatmapper 1.3
1176 573 2013-10-21 07:49:00 11042 cat1 1.0.0 11027 Remove_ending 1.0.0
1177 573 2013-10-21 07:49:00 11102 Remove_ending 1.0.0 11030 Remove beginning1 1.0.0
1178 573 2013-10-21 07:49:00 10822 Remove_ending 1.0.0 11039 Remove beginning1 1.0.0
1179 573 2013-10-21 07:49:00 10994 Remove_ending 1.0.0 11041 Remove beginning1 1.0.0
1180 573 2013-10-21 07:49:00 10854 Cut1 1.0.2 11042 cat1 1.0.0
1181 573 2013-10-21 07:49:00 10856 Paste1 1.0.0 11046 Cut1 1.0.2
1182 573 2013-10-21 07:49:00 10870 Remove_ending 1.0.0 11047 Remove beginning1 1.0.0
1183 573 2013-10-21 07:49:00 10856 Paste1 1.0.0 11056 Cut1 1.0.2
1184 573 2013-10-21 07:49:00 10907 heatmapper 1.3 11057 Filter1 1.1.0
1185 573 2013-10-21 07:49:00 10910 heatmapper 1.3 11058 Filter1 1.1.0
1186 573 2013-10-21 07:49:00 10936 heatmapper 1.3 11059 Filter1 1.1.0
1187 573 2013-10-21 07:49:00 10908 heatmapper 1.3 11060 Filter1 1.1.0
1188 573 2013-10-21 07:49:00 10948 heatmapper 1.3 11063 Filter1 1.1.0
1189 573 2013-10-21 07:49:00 10942 heatmapper 1.3 11065 Filter1 1.1.0
1190 573 2013-10-21 07:49:00 10947 heatmapper 1.3 11066 Filter1 1.1.0
1191 573 2013-10-21 07:49:00 11019 Cut1 1.0.2 11067 Filter1 1.1.0
1192 573 2013-10-21 07:49:00 11030 Remove beginning1 1.0.0 11074 heatmapper 1.3
1193 573 2013-10-21 07:49:00 10998 Remove beginning1 1.0.0 11076 heatmapper 1.3
1194 573 2013-10-21 07:49:00 10981 Remove beginning1 1.0.0 11077 heatmapper 1.3
1195 573 2013-10-21 07:49:00 11098 Remove_ending 1.0.0 11079 Remove beginning1 1.0.0
1196 573 2013-10-21 07:49:00 10817 Remove_ending 1.0.0 11080 Remove beginning1 1.0.0
1197 573 2013-10-21 07:49:00 10818 Remove_ending 1.0.0 11081 Remove beginning1 1.0.0
1198 573 2013-10-21 07:49:00 10833 heatmapper 1.3 11083 Filter1 1.1.0
1199 573 2013-10-21 07:49:00 10830 heatmapper 1.3 11086 Filter1 1.1.0
1200 573 2013-10-21 07:49:00 10831 heatmapper 1.3 11087 Filter1 1.1.0
1201 573 2013-10-21 07:49:00 10824 heatmapper 1.3 11088 Filter1 1.1.0
1202 573 2013-10-21 07:49:00 10825 heatmapper 1.3 11089 Filter1 1.1.0
1203 573 2013-10-21 07:49:00 11077 heatmapper 1.3 11091 Filter1 1.1.0
1204 573 2013-10-21 07:49:00 11042 cat1 1.0.0 11094 Remove_ending 1.0.0
1205 573 2013-10-21 07:49:00 10851 Remove beginning1 1.0.0 11100 heatmapper 1.3
1206 573 2013-10-21 07:49:00 10824 heatmapper 1.3 11103
1207 573 2013-10-21 07:49:00 10825 heatmapper 1.3 11103
1208 573 2013-10-21 07:49:00 10827 heatmapper 1.3 11103
1209 573 2013-10-21 07:49:00 10830 heatmapper 1.3 11103
1210 573 2013-10-21 07:49:00 10831 heatmapper 1.3 11103
1211 573 2013-10-21 07:49:00 10833 heatmapper 1.3 11103
1212 573 2013-10-21 07:49:00 10857 heatmapper 1.3 11103
1213 573 2013-10-21 07:49:00 10860 heatmapper 1.3 11103
1214 573 2013-10-21 07:49:00 10861 heatmapper 1.3 11103
1215 573 2013-10-21 07:49:00 10862 heatmapper 1.3 11103
1216 573 2013-10-21 07:49:00 10866 heatmapper 1.3 11103
1217 573 2013-10-21 07:49:00 10867 heatmapper 1.3 11103
1218 573 2013-10-21 07:49:00 10869 heatmapper 1.3 11103
1219 573 2013-10-21 07:49:00 10873 heatmapper 1.3 11103
1220 573 2013-10-21 07:49:00 10904 heatmapper 1.3 11103
1221 573 2013-10-21 07:49:00 10906 heatmapper 1.3 11103
1222 573 2013-10-21 07:49:00 10907 heatmapper 1.3 11103
1223 573 2013-10-21 07:49:00 10908 heatmapper 1.3 11103
1224 573 2013-10-21 07:49:00 10910 heatmapper 1.3 11103
1225 573 2013-10-21 07:49:00 10916 heatmapper 1.3 11103
1226 573 2013-10-21 07:49:00 10936 heatmapper 1.3 11103
1227 573 2013-10-21 07:49:00 10941 heatmapper 1.3 11103
1228 573 2013-10-21 07:49:00 10942 heatmapper 1.3 11103
1229 573 2013-10-21 07:49:00 10944 heatmapper 1.3 11103
1230 573 2013-10-21 07:49:00 10947 heatmapper 1.3 11103
1231 573 2013-10-21 07:49:00 10948 heatmapper 1.3 11103
1232 573 2013-10-21 07:49:00 10976 heatmapper 1.3 11103
1233 573 2013-10-21 07:49:00 11003 heatmapper 1.3 11103
1234 573 2013-10-21 07:49:00 11009 heatmapper 1.3 11103
1235 573 2013-10-21 07:49:00 11010 heatmapper 1.3 11103
1236 573 2013-10-21 07:49:00 11012 heatmapper 1.3 11103
1237 573 2013-10-21 07:49:00 11015 heatmapper 1.3 11103
1238 573 2013-10-21 07:49:00 11028 heatmapper 1.3 11103
1239 573 2013-10-21 07:49:00 11070 heatmapper 1.3 11103
1240 573 2013-10-21 07:49:00 11072 heatmapper 1.3 11103
1241 573 2013-10-21 07:49:00 11077 heatmapper 1.3 11103
1242 573 2013-10-21 07:49:00 10840 cshl_word_list_grep 1.0.0 11104
1243 573 2013-10-21 07:49:00 11022 cshl_word_list_grep 1.0.0 11104
1244 573 2013-10-21 07:49:00 10848 Filter1 1.1.0 11105
1245 573 2013-10-21 07:49:00 10928 Filter1 1.1.0 11105
1246 573 2013-10-21 07:49:00 11068 Filter1 1.1.0 11105
1247 576 2013-10-21 09:06:00 11204 Cut1 1.0.2 11205 Add_a_column1 1.1.0
1248 576 2013-10-21 09:06:00 11203 Cut1 1.0.2 11206 Add_a_column1 1.1.0
1249 576 2013-10-21 09:06:00 11205 Add_a_column1 1.1.0 11207 Filter1 1.1.0
1250 576 2013-10-21 09:06:00 11207 Filter1 1.1.0 11208 toolshed.g2.bx.psu.edu/repos/aaronquinlan/bedtools/bedtools_intersectbed_bam/0.1.0 0.1.0
1251 576 2013-10-21 09:06:00 11208 toolshed.g2.bx.psu.edu/repos/aaronquinlan/bedtools/bedtools_intersectbed_bam/0.1.0 0.1.0 11210 smooth_running_window 0.1
1252 576 2013-10-21 09:06:00 11210 smooth_running_window 0.1 11211 Filter1 1.1.0
1253 576 2013-10-21 09:06:00 11212 methtools_destrand 0.1.1 11213 cshl_sort_header 0.1
1254 576 2013-10-21 09:06:00 11213 cshl_sort_header 0.1 11214 Cut1 1.0.2
1255 576 2013-10-21 09:06:00 11215 Add_a_column1 1.1.0 11216 Cut1 1.0.2
1256 576 2013-10-21 09:06:00 11221 cat1 1.0.0 11222
1257 576 2013-10-21 09:06:00 11221 cat1 1.0.0 11223
1258 576 2013-10-21 09:06:00 11221 cat1 1.0.0 11224
1259 576 2013-10-21 09:06:00 11221 cat1 1.0.0 11225
1260 576 2013-10-21 09:06:00 11221 cat1 1.0.0 11226
1261 576 2013-10-21 09:06:00 11221 cat1 1.0.0 11227
1262 576 2013-10-21 09:06:00 11221 cat1 1.0.0 11228
1263 576 2013-10-21 09:06:00 11221 cat1 1.0.0 11229
1264 576 2013-10-21 09:06:00 11221 cat1 1.0.0 11230
1265 576 2013-10-21 09:06:00 11221 cat1 1.0.0 11231
1266 576 2013-10-21 09:06:00 11221 cat1 1.0.0 11232
1267 576 2013-10-21 09:06:00 11221 cat1 1.0.0 11233
1268 576 2013-10-21 09:06:00 11221 cat1 1.0.0 11234
1269 576 2013-10-21 09:06:00 11221 cat1 1.0.0 11235
1270 576 2013-10-21 09:06:00 11221 cat1 1.0.0 11236
1271 576 2013-10-21 09:06:00 11221 cat1 1.0.0 11237
1272 576 2013-10-21 09:06:00 11221 cat1 1.0.0 11238
1273 576 2013-10-21 09:06:00 11221 cat1 1.0.0 11239
1274 576 2013-10-21 09:06:00 11221 cat1 1.0.0 11240
1275 576 2013-10-21 09:06:00 11221 cat1 1.0.0 11241
1276 576 2013-10-21 09:06:00 11221 cat1 1.0.0 11242
1277 576 2013-10-21 09:06:00 11221 cat1 1.0.0 11243
1278 577 2013-10-21 10:42:00 11502 cat1 1.0.0 11244 Remove_ending 1.0.0
1279 577 2013-10-21 10:42:00 11502 cat1 1.0.0 11245 Remove_ending 1.0.0
1280 577 2013-10-21 10:42:00 11502 cat1 1.0.0 11246 Remove_ending 1.0.0
1281 577 2013-10-21 10:42:00 11502 cat1 1.0.0 11247 Remove_ending 1.0.0
1282 577 2013-10-21 10:42:00 11502 cat1 1.0.0 11248 Remove_ending 1.0.0
1283 577 2013-10-21 10:42:00 11502 cat1 1.0.0 11249 Remove_ending 1.0.0
1284 577 2013-10-21 10:42:00 11502 cat1 1.0.0 11250 Remove_ending 1.0.0
1285 577 2013-10-21 10:42:00 11502 cat1 1.0.0 11251 Remove_ending 1.0.0
1286 577 2013-10-21 10:42:00 11529 Remove_ending 1.0.0 11252 Remove beginning1 1.0.0
1287 577 2013-10-21 10:42:00 11502 cat1 1.0.0 11255 Remove_ending 1.0.0
1288 577 2013-10-21 10:42:00 11363 cat1 1.0.0 11256 Remove_ending 1.0.0
1289 577 2013-10-21 10:42:00 11328 Remove beginning1 1.0.0 11257 heatmapper 1.3
1290 577 2013-10-21 10:42:00 11334 Remove beginning1 1.0.0 11259 heatmapper 1.3
1291 577 2013-10-21 10:42:00 11335 Remove beginning1 1.0.0 11260 heatmapper 1.3
1292 577 2013-10-21 10:42:00 11353 Remove beginning1 1.0.0 11262 heatmapper 1.3
1293 577 2013-10-21 10:42:00 11432 Remove beginning1 1.0.0 11264 heatmapper 1.3
1294 577 2013-10-21 10:42:00 11324 Remove beginning1 1.0.0 11265 heatmapper 1.3
1295 577 2013-10-21 10:42:00 11327 Remove beginning1 1.0.0 11266 heatmapper 1.3
1296 577 2013-10-21 10:42:00 11349 heatmapper 1.3 11268 Filter1 1.1.0
1297 577 2013-10-21 10:42:00 11307 Filter1 1.1.0 11272 cshl_word_list_grep 1.0.0
1298 577 2013-10-21 10:42:00 11401 Filter1 1.1.0 11273 cshl_word_list_grep 1.0.0
1299 577 2013-10-21 10:42:00 11402 Filter1 1.1.0 11273 cshl_word_list_grep 1.0.0
1300 577 2013-10-21 10:42:00 11406 Filter1 1.1.0 11273 cshl_word_list_grep 1.0.0
1301 577 2013-10-21 10:42:00 11515 Filter1 1.1.0 11274 cshl_word_list_grep 1.0.0
1302 577 2013-10-21 10:42:00 11345 Filter1 1.1.0 11275 cshl_word_list_grep 1.0.0
1303 577 2013-10-21 10:42:00 11347 Filter1 1.1.0 11275 cshl_word_list_grep 1.0.0
1304 577 2013-10-21 10:42:00 11348 Filter1 1.1.0 11275 cshl_word_list_grep 1.0.0
1305 577 2013-10-21 10:42:00 11351 Filter1 1.1.0 11275 cshl_word_list_grep 1.0.0
1306 577 2013-10-21 10:42:00 11524 Filter1 1.1.0 11275 cshl_word_list_grep 1.0.0
1307 577 2013-10-21 10:42:00 11415 Remove_ending 1.0.0 11276 Remove beginning1 1.0.0
1308 577 2013-10-21 10:42:00 11444 heatmapper 1.3 11278 Filter1 1.1.0
1309 577 2013-10-21 10:42:00 11322 Paste1 1.0.0 11280 Paste1 1.0.0
1310 577 2013-10-21 10:42:00 11365 Remove_ending 1.0.0 11285 Remove beginning1 1.0.0
1311 577 2013-10-21 10:42:00 11318 Paste1 1.0.0 11286 Cut1 1.0.2
1312 577 2013-10-21 10:42:00 11322 Paste1 1.0.0 11288 Cut1 1.0.2
1313 577 2013-10-21 10:42:00 11280 Paste1 1.0.0 11289 Paste1 1.0.0
1314 577 2013-10-21 10:42:00 11523 cat1 1.0.0 11292 Remove_ending 1.0.0
1315 577 2013-10-21 10:42:00 11434 Remove beginning1 1.0.0 11296 heatmapper 1.3
1316 577 2013-10-21 10:42:00 11430 Remove beginning1 1.0.0 11300 heatmapper 1.3
1317 577 2013-10-21 10:42:00 11439 Remove_ending 1.0.0 11305 Remove beginning1 1.0.0
1318 577 2013-10-21 10:42:00 11422 Remove beginning1 1.0.0 11306 heatmapper 1.3
1319 577 2013-10-21 10:42:00 11294 heatmapper 1.3 11307 Filter1 1.1.0
1320 577 2013-10-21 10:42:00 11293 heatmapper 1.3 11308 Filter1 1.1.0
1321 577 2013-10-21 10:42:00 11459 heatmapper 1.3 11309 Filter1 1.1.0
1322 577 2013-10-21 10:42:00 11290 heatmapper 1.3 11311 Filter1 1.1.0
1323 577 2013-10-21 10:42:00 11306 heatmapper 1.3 11312 Filter1 1.1.0
1324 577 2013-10-21 10:42:00 11337 heatmapper 1.3 11313 Filter1 1.1.0
1325 577 2013-10-21 10:42:00 11342 heatmapper 1.3 11314 Filter1 1.1.0
1326 577 2013-10-21 10:42:00 11523 cat1 1.0.0 11317 Remove_ending 1.0.0
1327 577 2013-10-21 10:42:00 11318 Paste1 1.0.0 11320 Paste1 1.0.0
1328 577 2013-10-21 10:42:00 11356 Remove_ending 1.0.0 11323 Remove beginning1 1.0.0
1329 577 2013-10-21 10:42:00 11526 Remove_ending 1.0.0 11324 Remove beginning1 1.0.0
1330 577 2013-10-21 10:42:00 11370 Remove_ending 1.0.0 11326 Remove beginning1 1.0.0
1331 577 2013-10-21 10:42:00 11354 Remove_ending 1.0.0 11329 Remove beginning1 1.0.0
1332 577 2013-10-21 10:42:00 11371 Remove_ending 1.0.0 11331 Remove beginning1 1.0.0
1333 577 2013-10-21 10:42:00 11364 Remove_ending 1.0.0 11334 Remove beginning1 1.0.0
1334 577 2013-10-21 10:42:00 11359 Remove beginning1 1.0.0 11336 heatmapper 1.3
1335 577 2013-10-21 10:42:00 11514 Remove beginning1 1.0.0 11338 heatmapper 1.3
1336 577 2013-10-21 10:42:00 11466 Remove beginning1 1.0.0 11339 heatmapper 1.3
1337 577 2013-10-21 10:42:00 11411 Remove beginning1 1.0.0 11340 heatmapper 1.3
1338 577 2013-10-21 10:42:00 11409 heatmapper 1.3 11343 heatmapper 1.3
1339 577 2013-10-21 10:42:00 11505 heatmapper 1.3 11344 Filter1 1.1.0
1340 577 2013-10-21 10:42:00 11506 heatmapper 1.3 11345 Filter1 1.1.0
1341 577 2013-10-21 10:42:00 11507 heatmapper 1.3 11346 Filter1 1.1.0
1342 577 2013-10-21 10:42:00 11508 heatmapper 1.3 11347 Filter1 1.1.0
1343 577 2013-10-21 10:42:00 11503 heatmapper 1.3 11350 Filter1 1.1.0
1344 577 2013-10-21 10:42:00 11475 cat1 1.0.0 11352 Remove_ending 1.0.0
1345 577 2013-10-21 10:42:00 11523 cat1 1.0.0 11354 Remove_ending 1.0.0
1346 577 2013-10-21 10:42:00 11363 cat1 1.0.0 11356 Remove_ending 1.0.0
1347 577 2013-10-21 10:42:00 11523 cat1 1.0.0 11357 Remove_ending 1.0.0
1348 577 2013-10-21 10:42:00 11478 Remove_ending 1.0.0 11359 Remove beginning1 1.0.0
1349 577 2013-10-21 10:42:00 11475 cat1 1.0.0 11360 Remove_ending 1.0.0
1350 577 2013-10-21 10:42:00 11454 Cut1 1.0.2 11361 Filter1 1.1.0
1351 577 2013-10-21 10:42:00 11475 cat1 1.0.0 11362 Remove_ending 1.0.0
1352 577 2013-10-21 10:42:00 11533 heatmapper 1.3 11362 Remove_ending 1.0.0
1353 577 2013-10-21 10:42:00 11489 Cut1 1.0.2 11363 cat1 1.0.0
1354 577 2013-10-21 10:42:00 11523 cat1 1.0.0 11364 Remove_ending 1.0.0
1355 577 2013-10-21 10:42:00 11363 cat1 1.0.0 11365 Remove_ending 1.0.0
1356 577 2013-10-21 10:42:00 11438 Remove beginning1 1.0.0 11368 heatmapper 1.3
1357 577 2013-10-21 10:42:00 11285 Remove beginning1 1.0.0 11374 heatmapper 1.3
1358 577 2013-10-21 10:42:00 11423 Remove beginning1 1.0.0 11377 heatmapper 1.3
1359 577 2013-10-21 10:42:00 11252 Remove beginning1 1.0.0 11380 heatmapper 1.3
1360 577 2013-10-21 10:42:00 11267 Remove beginning1 1.0.0 11381 heatmapper 1.3
1361 577 2013-10-21 10:42:00 11374 heatmapper 1.3 11382 Filter1 1.1.0
1362 577 2013-10-21 10:42:00 11377 heatmapper 1.3 11383 Filter1 1.1.0
1363 577 2013-10-21 10:42:00 11448 heatmapper 1.3 11384 Filter1 1.1.0
1364 577 2013-10-21 10:42:00 11445 heatmapper 1.3 11385 Filter1 1.1.0
1365 577 2013-10-21 10:42:00 11376 heatmapper 1.3 11388 Filter1 1.1.0
1366 577 2013-10-21 10:42:00 11435 heatmapper 1.3 11389 Filter1 1.1.0
1367 577 2013-10-21 10:42:00 11447 heatmapper 1.3 11391 Filter1 1.1.0
1368 577 2013-10-21 10:42:00 11475 cat1 1.0.0 11392 Remove_ending 1.0.0
1369 577 2013-10-21 10:42:00 11280 Paste1 1.0.0 11393 Cut1 1.0.2
1370 577 2013-10-21 10:42:00 11475 cat1 1.0.0 11394 Remove_ending 1.0.0
1371 577 2013-10-21 10:42:00 11363 cat1 1.0.0 11396 Remove_ending 1.0.0
1372 577 2013-10-21 10:42:00 11300 heatmapper 1.3 11403 Filter1 1.1.0
1373 577 2013-10-21 10:42:00 11301 heatmapper 1.3 11404 Filter1 1.1.0
1374 577 2013-10-21 10:42:00 11302 heatmapper 1.3 11405 Filter1 1.1.0
1375 577 2013-10-21 10:42:00 11259 heatmapper 1.3 11407 Filter1 1.1.0
1376 577 2013-10-21 10:42:00 11482 Remove beginning1 1.0.0 11409 heatmapper 1.3
1377 577 2013-10-21 10:42:00 11487 Remove_ending 1.0.0 11412 Remove beginning1 1.0.0
1378 577 2013-10-21 10:42:00 11254 Remove_ending 1.0.0 11414 Remove beginning1 1.0.0
1379 577 2013-10-21 10:42:00 11363 cat1 1.0.0 11415 Remove_ending 1.0.0
1380 577 2013-10-21 10:42:00 11475 cat1 1.0.0 11418 Remove_ending 1.0.0
1381 577 2013-10-21 10:42:00 11475 cat1 1.0.0 11419 Remove_ending 1.0.0
1382 577 2013-10-21 10:42:00 11367 Remove_ending 1.0.0 11420 Remove beginning1 1.0.0
1383 577 2013-10-21 10:42:00 11366 Remove_ending 1.0.0 11421 Remove beginning1 1.0.0
1384 577 2013-10-21 10:42:00 11488 Remove_ending 1.0.0 11423 Remove beginning1 1.0.0
1385 577 2013-10-21 10:42:00 11392 Remove_ending 1.0.0 11425 Remove beginning1 1.0.0
1386 577 2013-10-21 10:42:00 11363 cat1 1.0.0 11427 Remove_ending 1.0.0
1387 577 2013-10-21 10:42:00 11253 Remove_ending 1.0.0 11431 Remove beginning1 1.0.0
1388 577 2013-10-21 10:42:00 11292 Remove_ending 1.0.0 11432 Remove beginning1 1.0.0
1389 577 2013-10-21 10:42:00 11363 cat1 1.0.0 11433 Remove_ending 1.0.0
1390 577 2013-10-21 10:42:00 11362 Remove_ending 1.0.0 11434 Remove beginning1 1.0.0
1391 577 2013-10-21 10:42:00 11473 Remove beginning1 1.0.0 11436 heatmapper 1.3
1392 577 2013-10-21 10:42:00 11484 Remove_ending 1.0.0 11437 Remove beginning1 1.0.0
1393 577 2013-10-21 10:42:00 11485 Remove_ending 1.0.0 11438 Remove beginning1 1.0.0
1394 577 2013-10-21 10:42:00 11464 cat1 1.0.0 11439 Remove_ending 1.0.0
1395 577 2013-10-21 10:42:00 11464 cat1 1.0.0 11440 Remove_ending 1.0.0
1396 577 2013-10-21 10:42:00 11468 Remove beginning1 1.0.0 11441 heatmapper 1.3
1397 577 2013-10-21 10:42:00 11471 Remove beginning1 1.0.0 11448 heatmapper 1.3
1398 577 2013-10-21 10:42:00 11455 cshl_word_list_grep 1.0.0 11450 Cut1 1.0.2
1399 577 2013-10-21 10:42:00 11457 cshl_word_list_grep 1.0.0 11452 Cut1 1.0.2
1400 577 2013-10-21 10:42:00 11270 Filter1 1.1.0 11455 cshl_word_list_grep 1.0.0
1401 577 2013-10-21 10:42:00 11271 Filter1 1.1.0 11455 cshl_word_list_grep 1.0.0
1402 577 2013-10-21 10:42:00 11277 Filter1 1.1.0 11455 cshl_word_list_grep 1.0.0
1403 577 2013-10-21 10:42:00 11385 Filter1 1.1.0 11455 cshl_word_list_grep 1.0.0
1404 577 2013-10-21 10:42:00 11386 Filter1 1.1.0 11455 cshl_word_list_grep 1.0.0
1405 577 2013-10-21 10:42:00 11275 cshl_word_list_grep 1.0.0 11456 Cut1 1.0.2
1406 577 2013-10-21 10:42:00 11490 Filter1 1.1.0 11457 cshl_word_list_grep 1.0.0
1407 577 2013-10-21 10:42:00 11491 Filter1 1.1.0 11457 cshl_word_list_grep 1.0.0
1408 577 2013-10-21 10:42:00 11492 Filter1 1.1.0 11457 cshl_word_list_grep 1.0.0
1409 577 2013-10-21 10:42:00 11493 Filter1 1.1.0 11457 cshl_word_list_grep 1.0.0
1410 577 2013-10-21 10:42:00 11494 Filter1 1.1.0 11457 cshl_word_list_grep 1.0.0
1411 577 2013-10-21 10:42:00 11495 Filter1 1.1.0 11457 cshl_word_list_grep 1.0.0
1412 577 2013-10-21 10:42:00 11496 Filter1 1.1.0 11457 cshl_word_list_grep 1.0.0
1413 577 2013-10-21 10:42:00 11497 Filter1 1.1.0 11457 cshl_word_list_grep 1.0.0
1414 577 2013-10-21 10:42:00 11382 Filter1 1.1.0 11458 cshl_word_list_grep 1.0.0
1415 577 2013-10-21 10:42:00 11383 Filter1 1.1.0 11458 cshl_word_list_grep 1.0.0
1416 577 2013-10-21 10:42:00 11384 Filter1 1.1.0 11458 cshl_word_list_grep 1.0.0
1417 577 2013-10-21 10:42:00 11389 Filter1 1.1.0 11458 cshl_word_list_grep 1.0.0
1418 577 2013-10-21 10:42:00 11391 Filter1 1.1.0 11458 cshl_word_list_grep 1.0.0
1419 577 2013-10-21 10:42:00 11498 Filter1 1.1.0 11458 cshl_word_list_grep 1.0.0
1420 577 2013-10-21 10:42:00 11499 Filter1 1.1.0 11458 cshl_word_list_grep 1.0.0
1421 577 2013-10-21 10:42:00 11475 cat1 1.0.0 11460 Remove_ending 1.0.0
1422 577 2013-10-21 10:42:00 11393 Cut1 1.0.2 11464 cat1 1.0.0
1423 577 2013-10-21 10:42:00 11249 Remove_ending 1.0.0 11465 Remove beginning1 1.0.0
1424 577 2013-10-21 10:42:00 11248 Remove_ending 1.0.0 11466 Remove beginning1 1.0.0
1425 577 2013-10-21 10:42:00 11247 Remove_ending 1.0.0 11467 Remove beginning1 1.0.0
1426 577 2013-10-21 10:42:00 11246 Remove_ending 1.0.0 11468 Remove beginning1 1.0.0
1427 577 2013-10-21 10:42:00 11245 Remove_ending 1.0.0 11469 Remove beginning1 1.0.0
1428 577 2013-10-21 10:42:00 11244 Remove_ending 1.0.0 11470 Remove beginning1 1.0.0
1429 577 2013-10-21 10:42:00 11256 Remove_ending 1.0.0 11471 Remove beginning1 1.0.0
1430 577 2013-10-21 10:42:00 11433 Remove_ending 1.0.0 11473 Remove beginning1 1.0.0
1431 577 2013-10-21 10:42:00 11427 Remove_ending 1.0.0 11474 Remove beginning1 1.0.0
1432 577 2013-10-21 10:42:00 11287 Cut1 1.0.2 11475 cat1 1.0.0
1433 577 2013-10-21 10:42:00 11464 cat1 1.0.0 11476 Remove_ending 1.0.0
1434 577 2013-10-21 10:42:00 11303 Remove_ending 1.0.0 11480 Remove beginning1 1.0.0
1435 577 2013-10-21 10:42:00 11464 cat1 1.0.0 11481 Remove_ending 1.0.0
1436 577 2013-10-21 10:42:00 11464 cat1 1.0.0 11483 Remove_ending 1.0.0
1437 577 2013-10-21 10:42:00 11464 cat1 1.0.0 11484 Remove_ending 1.0.0
1438 577 2013-10-21 10:42:00 11464 cat1 1.0.0 11485 Remove_ending 1.0.0
1439 577 2013-10-21 10:42:00 11464 cat1 1.0.0 11486 Remove_ending 1.0.0
1440 577 2013-10-21 10:42:00 11464 cat1 1.0.0 11487 Remove_ending 1.0.0
1441 577 2013-10-21 10:42:00 11363 cat1 1.0.0 11488 Remove_ending 1.0.0
1442 577 2013-10-21 10:42:00 11343 heatmapper 1.3 11491 Filter1 1.1.0
1443 577 2013-10-21 10:42:00 11369 heatmapper 1.3 11492 Filter1 1.1.0
1444 577 2013-10-21 10:42:00 11341 heatmapper 1.3 11493 Filter1 1.1.0
1445 577 2013-10-21 10:42:00 11379 heatmapper 1.3 11494 Filter1 1.1.0
1446 577 2013-10-21 10:42:00 11368 heatmapper 1.3 11495 Filter1 1.1.0
1447 577 2013-10-21 10:42:00 11381 heatmapper 1.3 11496 Filter1 1.1.0
1448 577 2013-10-21 10:42:00 11378 heatmapper 1.3 11497 Filter1 1.1.0
1449 577 2013-10-21 10:42:00 11375 heatmapper 1.3 11498 Filter1 1.1.0
1450 577 2013-10-21 10:42:00 11479 Cut1 1.0.2 11502 cat1 1.0.0
1451 577 2013-10-21 10:42:00 11511 Remove beginning1 1.0.0 11504 heatmapper 1.3
1452 577 2013-10-21 10:42:00 11480 Remove beginning1 1.0.0 11506 heatmapper 1.3
1453 577 2013-10-21 10:42:00 11395 Remove beginning1 1.0.0 11508 heatmapper 1.3
1454 577 2013-10-21 10:42:00 11414 Remove beginning1 1.0.0 11510 heatmapper 1.3
1455 577 2013-10-21 10:42:00 11291 Remove_ending 1.0.0 11511 Remove beginning1 1.0.0
1456 577 2013-10-21 10:42:00 11531 Remove_ending 1.0.0 11512 Remove beginning1 1.0.0
1457 577 2013-10-21 10:42:00 11251 Remove_ending 1.0.0 11514 Remove beginning1 1.0.0
1458 577 2013-10-21 10:42:00 11265 heatmapper 1.3 11515 Filter1 1.1.0
1459 577 2013-10-21 10:42:00 11266 heatmapper 1.3 11516 Filter1 1.1.0
1460 577 2013-10-21 10:42:00 11261 heatmapper 1.3 11517 Filter1 1.1.0
1461 577 2013-10-21 10:42:00 11262 heatmapper 1.3 11518 Filter1 1.1.0
1462 577 2013-10-21 10:42:00 11263 heatmapper 1.3 11519 Filter1 1.1.0
1463 577 2013-10-21 10:42:00 11264 heatmapper 1.3 11520 Filter1 1.1.0
1464 577 2013-10-21 10:42:00 11257 heatmapper 1.3 11521 Filter1 1.1.0
1465 577 2013-10-21 10:42:00 11258 heatmapper 1.3 11522 Filter1 1.1.0
1466 577 2013-10-21 10:42:00 11510 heatmapper 1.3 11524 Filter1 1.1.0
1467 577 2013-10-21 10:42:00 11523 cat1 1.0.0 11526 Remove_ending 1.0.0
1468 577 2013-10-21 10:42:00 11475 cat1 1.0.0 11527 Remove_ending 1.0.0
1469 577 2013-10-21 10:42:00 11523 cat1 1.0.0 11528 Remove_ending 1.0.0
1470 577 2013-10-21 10:42:00 11363 cat1 1.0.0 11529 Remove_ending 1.0.0
1471 577 2013-10-21 10:42:00 11523 cat1 1.0.0 11530 Remove_ending 1.0.0
1472 577 2013-10-21 10:42:00 11523 cat1 1.0.0 11532 Remove_ending 1.0.0
1473 577 2013-10-21 10:42:00 11257 heatmapper 1.3 11536
1474 577 2013-10-21 10:42:00 11258 heatmapper 1.3 11536
1475 577 2013-10-21 10:42:00 11259 heatmapper 1.3 11536
1476 577 2013-10-21 10:42:00 11261 heatmapper 1.3 11536
1477 577 2013-10-21 10:42:00 11262 heatmapper 1.3 11536
1478 577 2013-10-21 10:42:00 11263 heatmapper 1.3 11536
1479 577 2013-10-21 10:42:00 11264 heatmapper 1.3 11536
1480 577 2013-10-21 10:42:00 11265 heatmapper 1.3 11536
1481 577 2013-10-21 10:42:00 11266 heatmapper 1.3 11536
1482 577 2013-10-21 10:42:00 11290 heatmapper 1.3 11536
1483 577 2013-10-21 10:42:00 11293 heatmapper 1.3 11536
1484 577 2013-10-21 10:42:00 11294 heatmapper 1.3 11536
1485 577 2013-10-21 10:42:00 11300 heatmapper 1.3 11536
1486 577 2013-10-21 10:42:00 11301 heatmapper 1.3 11536
1487 577 2013-10-21 10:42:00 11302 heatmapper 1.3 11536
1488 577 2013-10-21 10:42:00 11306 heatmapper 1.3 11536
1489 577 2013-10-21 10:42:00 11337 heatmapper 1.3 11536
1490 577 2013-10-21 10:42:00 11341 heatmapper 1.3 11536
1491 577 2013-10-21 10:42:00 11342 heatmapper 1.3 11536
1492 577 2013-10-21 10:42:00 11343 heatmapper 1.3 11536
1493 577 2013-10-21 10:42:00 11349 heatmapper 1.3 11536
1494 577 2013-10-21 10:42:00 11368 heatmapper 1.3 11536
1495 577 2013-10-21 10:42:00 11369 heatmapper 1.3 11536
1496 577 2013-10-21 10:42:00 11374 heatmapper 1.3 11536
1497 577 2013-10-21 10:42:00 11375 heatmapper 1.3 11536
1498 577 2013-10-21 10:42:00 11376 heatmapper 1.3 11536
1499 577 2013-10-21 10:42:00 11377 heatmapper 1.3 11536
1500 577 2013-10-21 10:42:00 11378 heatmapper 1.3 11536
1501 577 2013-10-21 10:42:00 11379 heatmapper 1.3 11536
1502 577 2013-10-21 10:42:00 11381 heatmapper 1.3 11536
1503 577 2013-10-21 10:42:00 11409 heatmapper 1.3 11536
1504 577 2013-10-21 10:42:00 11435 heatmapper 1.3 11536
1505 577 2013-10-21 10:42:00 11444 heatmapper 1.3 11536
1506 577 2013-10-21 10:42:00 11445 heatmapper 1.3 11536
1507 577 2013-10-21 10:42:00 11447 heatmapper 1.3 11536
1508 577 2013-10-21 10:42:00 11448 heatmapper 1.3 11536
1509 577 2013-10-21 10:42:00 11459 heatmapper 1.3 11536
1510 577 2013-10-21 10:42:00 11503 heatmapper 1.3 11536
1511 577 2013-10-21 10:42:00 11505 heatmapper 1.3 11536
1512 577 2013-10-21 10:42:00 11506 heatmapper 1.3 11536
1513 577 2013-10-21 10:42:00 11507 heatmapper 1.3 11536
1514 577 2013-10-21 10:42:00 11508 heatmapper 1.3 11536
1515 577 2013-10-21 10:42:00 11510 heatmapper 1.3 11536
1516 577 2013-10-21 10:42:00 11533 heatmapper 1.3 11536
1517 577 2013-10-21 10:42:00 11275 cshl_word_list_grep 1.0.0 11537
1518 577 2013-10-21 10:42:00 11455 cshl_word_list_grep 1.0.0 11537
1519 577 2013-10-21 10:42:00 11457 cshl_word_list_grep 1.0.0 11537
1520 577 2013-10-21 10:42:00 11281 Filter1 1.1.0 11538
1521 577 2013-10-21 10:42:00 11283 Filter1 1.1.0 11538
1522 577 2013-10-21 10:42:00 11361 Filter1 1.1.0 11538
1523 577 2013-10-21 10:42:00 11426 Filter1 1.1.0 11538
1524 578 2013-10-21 10:57:00 11798 cat1 1.0.0 11540 Remove_ending 1.0.0
1525 578 2013-10-21 10:57:00 11798 cat1 1.0.0 11541 Remove_ending 1.0.0
1526 578 2013-10-21 10:57:00 11798 cat1 1.0.0 11542 Remove_ending 1.0.0
1527 578 2013-10-21 10:57:00 11798 cat1 1.0.0 11543 Remove_ending 1.0.0
1528 578 2013-10-21 10:57:00 11798 cat1 1.0.0 11544 Remove_ending 1.0.0
1529 578 2013-10-21 10:57:00 11798 cat1 1.0.0 11545 Remove_ending 1.0.0
1530 578 2013-10-21 10:57:00 11798 cat1 1.0.0 11546 Remove_ending 1.0.0
1531 578 2013-10-21 10:57:00 11798 cat1 1.0.0 11547 Remove_ending 1.0.0
1532 578 2013-10-21 10:57:00 11617 cat1 1.0.0 11549 Remove_ending 1.0.0
1533 578 2013-10-21 10:57:00 11617 cat1 1.0.0 11550 Remove_ending 1.0.0
1534 578 2013-10-21 10:57:00 11798 cat1 1.0.0 11551 Remove_ending 1.0.0
1535 578 2013-10-21 10:57:00 11659 cat1 1.0.0 11552 Remove_ending 1.0.0
1536 578 2013-10-21 10:57:00 11625 Remove beginning1 1.0.0 11554 heatmapper 1.3
1537 578 2013-10-21 10:57:00 11631 Remove beginning1 1.0.0 11556 heatmapper 1.3
1538 578 2013-10-21 10:57:00 11621 Remove beginning1 1.0.0 11557 heatmapper 1.3
1539 578 2013-10-21 10:57:00 11634 heatmapper 1.3 11565 Filter1 1.1.0
1540 578 2013-10-21 10:57:00 11635 heatmapper 1.3 11566 Filter1 1.1.0
1541 578 2013-10-21 10:57:00 11603 Filter1 1.1.0 11568 cshl_word_list_grep 1.0.0
1542 578 2013-10-21 10:57:00 11604 Filter1 1.1.0 11568 cshl_word_list_grep 1.0.0
1543 578 2013-10-21 10:57:00 11605 Filter1 1.1.0 11568 cshl_word_list_grep 1.0.0
1544 578 2013-10-21 10:57:00 11607 Filter1 1.1.0 11568 cshl_word_list_grep 1.0.0
1545 578 2013-10-21 10:57:00 11611 Filter1 1.1.0 11568 cshl_word_list_grep 1.0.0
1546 578 2013-10-21 10:57:00 11612 Filter1 1.1.0 11568 cshl_word_list_grep 1.0.0
1547 578 2013-10-21 10:57:00 11695 Filter1 1.1.0 11569 cshl_word_list_grep 1.0.0
1548 578 2013-10-21 10:57:00 11697 Filter1 1.1.0 11569 cshl_word_list_grep 1.0.0
1549 578 2013-10-21 10:57:00 11698 Filter1 1.1.0 11569 cshl_word_list_grep 1.0.0
1550 578 2013-10-21 10:57:00 11699 Filter1 1.1.0 11569 cshl_word_list_grep 1.0.0
1551 578 2013-10-21 10:57:00 11700 Filter1 1.1.0 11569 cshl_word_list_grep 1.0.0
1552 578 2013-10-21 10:57:00 11701 Filter1 1.1.0 11569 cshl_word_list_grep 1.0.0
1553 578 2013-10-21 10:57:00 11703 Filter1 1.1.0 11570 cshl_word_list_grep 1.0.0
1554 578 2013-10-21 10:57:00 11811 Filter1 1.1.0 11570 cshl_word_list_grep 1.0.0
1555 578 2013-10-21 10:57:00 11812 Filter1 1.1.0 11570 cshl_word_list_grep 1.0.0
1556 578 2013-10-21 10:57:00 11813 Filter1 1.1.0 11570 cshl_word_list_grep 1.0.0
1557 578 2013-10-21 10:57:00 11816 Filter1 1.1.0 11570 cshl_word_list_grep 1.0.0
1558 578 2013-10-21 10:57:00 11643 Filter1 1.1.0 11571 cshl_word_list_grep 1.0.0
1559 578 2013-10-21 10:57:00 11820 Filter1 1.1.0 11571 cshl_word_list_grep 1.0.0
1560 578 2013-10-21 10:57:00 11821 Filter1 1.1.0 11571 cshl_word_list_grep 1.0.0
1561 578 2013-10-21 10:57:00 11711 Remove_ending 1.0.0 11572 Remove beginning1 1.0.0
1562 578 2013-10-21 10:57:00 11618 Paste1 1.0.0 11576 Paste1 1.0.0
1563 578 2013-10-21 10:57:00 11712 Remove_ending 1.0.0 11580 Remove beginning1 1.0.0
1564 578 2013-10-21 10:57:00 11661 Remove_ending 1.0.0 11581 Remove beginning1 1.0.0
1565 578 2013-10-21 10:57:00 11616 Paste1 1.0.0 11583 Cut1 1.0.2
1566 578 2013-10-21 10:57:00 11618 Paste1 1.0.0 11584 Cut1 1.0.2
1567 578 2013-10-21 10:57:00 11576 Paste1 1.0.0 11585 Paste1 1.0.0
1568 578 2013-10-21 10:57:00 11713 Remove beginning1 1.0.0 11586 heatmapper 1.3
1569 578 2013-10-21 10:57:00 11617 cat1 1.0.0 11587 Remove_ending 1.0.0
1570 578 2013-10-21 10:57:00 11716 Remove beginning1 1.0.0 11589 heatmapper 1.3
1571 578 2013-10-21 10:57:00 11724 Remove beginning1 1.0.0 11593 heatmapper 1.3
1572 578 2013-10-21 10:57:00 11720 Remove beginning1 1.0.0 11594 heatmapper 1.3
1573 578 2013-10-21 10:57:00 11628 Remove beginning1 1.0.0 11598 heatmapper 1.3
1574 578 2013-10-21 10:57:00 11617 cat1 1.0.0 11599 Remove_ending 1.0.0
1575 578 2013-10-21 10:57:00 11617 cat1 1.0.0 11600 Remove_ending 1.0.0
1576 578 2013-10-21 10:57:00 11735 Remove_ending 1.0.0 11601 Remove beginning1 1.0.0
1577 578 2013-10-21 10:57:00 11602 heatmapper 1.3 11608 Filter1 1.1.0
1578 578 2013-10-21 10:57:00 11633 heatmapper 1.3 11609 Filter1 1.1.0
1579 578 2013-10-21 10:57:00 11616 Paste1 1.0.0 11618 Paste1 1.0.0
1580 578 2013-10-21 10:57:00 11652 Remove_ending 1.0.0 11619 Remove beginning1 1.0.0
1581 578 2013-10-21 10:57:00 11822 Remove_ending 1.0.0 11620 Remove beginning1 1.0.0
1582 578 2013-10-21 10:57:00 11650 Remove_ending 1.0.0 11625 Remove beginning1 1.0.0
1583 578 2013-10-21 10:57:00 11714 Remove_ending 1.0.0 11628 Remove beginning1 1.0.0
1584 578 2013-10-21 10:57:00 11690 Remove_ending 1.0.0 11629 Remove beginning1 1.0.0
1585 578 2013-10-21 10:57:00 11660 Remove_ending 1.0.0 11630 Remove beginning1 1.0.0
1586 578 2013-10-21 10:57:00 11656 Remove_ending 1.0.0 11631 Remove beginning1 1.0.0
1587 578 2013-10-21 10:57:00 11655 Remove beginning1 1.0.0 11632 heatmapper 1.3
1588 578 2013-10-21 10:57:00 11693 Remove beginning1 1.0.0 11633 heatmapper 1.3
1589 578 2013-10-21 10:57:00 11762 Remove beginning1 1.0.0 11635 heatmapper 1.3
1590 578 2013-10-21 10:57:00 11705 heatmapper 1.3 11639 heatmapper 1.3
1591 578 2013-10-21 10:57:00 11801 heatmapper 1.3 11640 Filter1 1.1.0
1592 578 2013-10-21 10:57:00 11802 heatmapper 1.3 11641 Filter1 1.1.0
1593 578 2013-10-21 10:57:00 11803 heatmapper 1.3 11642 Filter1 1.1.0
1594 578 2013-10-21 10:57:00 11804 heatmapper 1.3 11643 Filter1 1.1.0
1595 578 2013-10-21 10:57:00 11809 Remove beginning1 1.0.0 11645 heatmapper 1.3
1596 578 2013-10-21 10:57:00 11799 heatmapper 1.3 11646 Filter1 1.1.0
1597 578 2013-10-21 10:57:00 11828 Remove_ending 1.0.0 11649 Remove beginning1 1.0.0
1598 578 2013-10-21 10:57:00 11659 cat1 1.0.0 11652 Remove_ending 1.0.0
1599 578 2013-10-21 10:57:00 11750 Cut1 1.0.2 11657 Filter1 1.1.0
1600 578 2013-10-21 10:57:00 11785 Cut1 1.0.2 11659 cat1 1.0.0
1601 578 2013-10-21 10:57:00 11659 cat1 1.0.0 11661 Remove_ending 1.0.0
1602 578 2013-10-21 10:57:00 11734 Remove beginning1 1.0.0 11664 heatmapper 1.3
1603 578 2013-10-21 10:57:00 11709 Remove beginning1 1.0.0 11665 heatmapper 1.3
1604 578 2013-10-21 10:57:00 11581 Remove beginning1 1.0.0 11670 heatmapper 1.3
1605 578 2013-10-21 10:57:00 11672 heatmapper 1.3 11684 Filter1 1.1.0
1606 578 2013-10-21 10:57:00 11732 heatmapper 1.3 11686 Filter1 1.1.0
1607 578 2013-10-21 10:57:00 11743 heatmapper 1.3 11687 Filter1 1.1.0
1608 578 2013-10-21 10:57:00 11576 Paste1 1.0.0 11689 Cut1 1.0.2
1609 578 2013-10-21 10:57:00 11659 cat1 1.0.0 11692 Remove_ending 1.0.0
1610 578 2013-10-21 10:57:00 11773 Remove_ending 1.0.0 11693 Remove beginning1 1.0.0
1611 578 2013-10-21 10:57:00 11592 heatmapper 1.3 11695 Filter1 1.1.0
1612 578 2013-10-21 10:57:00 11598 heatmapper 1.3 11701 Filter1 1.1.0
1613 578 2013-10-21 10:57:00 11556 heatmapper 1.3 11702 Filter1 1.1.0
1614 578 2013-10-21 10:57:00 11555 heatmapper 1.3 11703 Filter1 1.1.0
1615 578 2013-10-21 10:57:00 11779 Remove_ending 1.0.0 11704 Remove beginning1 1.0.0
1616 578 2013-10-21 10:57:00 11777 Remove_ending 1.0.0 11706 Remove beginning1 1.0.0
1617 578 2013-10-21 10:57:00 11550 Remove_ending 1.0.0 11710 Remove beginning1 1.0.0
1618 578 2013-10-21 10:57:00 11659 cat1 1.0.0 11711 Remove_ending 1.0.0
1619 578 2013-10-21 10:57:00 11617 cat1 1.0.0 11712 Remove_ending 1.0.0
1620 578 2013-10-21 10:57:00 11663 Remove_ending 1.0.0 11716 Remove beginning1 1.0.0
1621 578 2013-10-21 10:57:00 11662 Remove_ending 1.0.0 11717 Remove beginning1 1.0.0
1622 578 2013-10-21 10:57:00 11669 Remove_ending 1.0.0 11718 Remove beginning1 1.0.0
1623 578 2013-10-21 10:57:00 11659 cat1 1.0.0 11723 Remove_ending 1.0.0
1624 578 2013-10-21 10:57:00 11756 Remove_ending 1.0.0 11725 Remove beginning1 1.0.0
1625 578 2013-10-21 10:57:00 11648 Remove_ending 1.0.0 11726 Remove beginning1 1.0.0
1626 578 2013-10-21 10:57:00 11588 Remove_ending 1.0.0 11728 Remove beginning1 1.0.0
1627 578 2013-10-21 10:57:00 11659 cat1 1.0.0 11729 Remove_ending 1.0.0
1628 578 2013-10-21 10:57:00 11572 Remove beginning1 1.0.0 11731 heatmapper 1.3
1629 578 2013-10-21 10:57:00 11761 Remove beginning1 1.0.0 11738 heatmapper 1.3
1630 578 2013-10-21 10:57:00 11768 Remove beginning1 1.0.0 11741 heatmapper 1.3
1631 578 2013-10-21 10:57:00 11765 Remove beginning1 1.0.0 11742 heatmapper 1.3
1632 578 2013-10-21 10:57:00 11770 Remove beginning1 1.0.0 11743 heatmapper 1.3
1633 578 2013-10-21 10:57:00 11767 Remove beginning1 1.0.0 11744 heatmapper 1.3
1634 578 2013-10-21 10:57:00 11751 cshl_word_list_grep 1.0.0 11746 Cut1 1.0.2
1635 578 2013-10-21 10:57:00 11753 cshl_word_list_grep 1.0.0 11748 Cut1 1.0.2
1636 578 2013-10-21 10:57:00 11569 cshl_word_list_grep 1.0.0 11750 Cut1 1.0.2
1637 578 2013-10-21 10:57:00 11564 Filter1 1.1.0 11751 cshl_word_list_grep 1.0.0
1638 578 2013-10-21 10:57:00 11681 Filter1 1.1.0 11751 cshl_word_list_grep 1.0.0
1639 578 2013-10-21 10:57:00 11682 Filter1 1.1.0 11751 cshl_word_list_grep 1.0.0
1640 578 2013-10-21 10:57:00 11683 Filter1 1.1.0 11751 cshl_word_list_grep 1.0.0
1641 578 2013-10-21 10:57:00 11610 Filter1 1.1.0 11753 cshl_word_list_grep 1.0.0
1642 578 2013-10-21 10:57:00 11788 Filter1 1.1.0 11753 cshl_word_list_grep 1.0.0
1643 578 2013-10-21 10:57:00 11790 Filter1 1.1.0 11753 cshl_word_list_grep 1.0.0
1644 578 2013-10-21 10:57:00 11791 Filter1 1.1.0 11753 cshl_word_list_grep 1.0.0
1645 578 2013-10-21 10:57:00 11793 Filter1 1.1.0 11753 cshl_word_list_grep 1.0.0
1646 578 2013-10-21 10:57:00 11678 Filter1 1.1.0 11754 cshl_word_list_grep 1.0.0
1647 578 2013-10-21 10:57:00 11679 Filter1 1.1.0 11754 cshl_word_list_grep 1.0.0
1648 578 2013-10-21 10:57:00 11680 Filter1 1.1.0 11754 cshl_word_list_grep 1.0.0
1649 578 2013-10-21 10:57:00 11684 Filter1 1.1.0 11754 cshl_word_list_grep 1.0.0
1650 578 2013-10-21 10:57:00 11686 Filter1 1.1.0 11754 cshl_word_list_grep 1.0.0
1651 578 2013-10-21 10:57:00 11687 Filter1 1.1.0 11754 cshl_word_list_grep 1.0.0
1652 578 2013-10-21 10:57:00 11794 Filter1 1.1.0 11754 cshl_word_list_grep 1.0.0
1653 578 2013-10-21 10:57:00 11622 Remove beginning1 1.0.0 11755 heatmapper 1.3
1654 578 2013-10-21 10:57:00 11627 Remove beginning1 1.0.0 11757 heatmapper 1.3
1655 578 2013-10-21 10:57:00 11545 Remove_ending 1.0.0 11761 Remove beginning1 1.0.0
1656 578 2013-10-21 10:57:00 11544 Remove_ending 1.0.0 11762 Remove beginning1 1.0.0
1657 578 2013-10-21 10:57:00 11543 Remove_ending 1.0.0 11763 Remove beginning1 1.0.0
1658 578 2013-10-21 10:57:00 11542 Remove_ending 1.0.0 11764 Remove beginning1 1.0.0
1659 578 2013-10-21 10:57:00 11541 Remove_ending 1.0.0 11765 Remove beginning1 1.0.0
1660 578 2013-10-21 10:57:00 11552 Remove_ending 1.0.0 11767 Remove beginning1 1.0.0
1661 578 2013-10-21 10:57:00 11583 Cut1 1.0.2 11771 cat1 1.0.0
1662 578 2013-10-21 10:57:00 11585 Paste1 1.0.0 11775 Cut1 1.0.2
1663 578 2013-10-21 10:57:00 11599 Remove_ending 1.0.0 11776 Remove beginning1 1.0.0
1664 578 2013-10-21 10:57:00 11758 Remove_ending 1.0.0 11778 Remove beginning1 1.0.0
1665 578 2013-10-21 10:57:00 11659 cat1 1.0.0 11784 Remove_ending 1.0.0
1666 578 2013-10-21 10:57:00 11585 Paste1 1.0.0 11785 Cut1 1.0.2
1667 578 2013-10-21 10:57:00 11664 heatmapper 1.3 11791 Filter1 1.1.0
1668 578 2013-10-21 10:57:00 11677 heatmapper 1.3 11792 Filter1 1.1.0
1669 578 2013-10-21 10:57:00 11674 heatmapper 1.3 11793 Filter1 1.1.0
1670 578 2013-10-21 10:57:00 11671 heatmapper 1.3 11794 Filter1 1.1.0
1671 578 2013-10-21 10:57:00 11676 heatmapper 1.3 11795 Filter1 1.1.0
1672 578 2013-10-21 10:57:00 11748 Cut1 1.0.2 11796 Filter1 1.1.0
1673 578 2013-10-21 10:57:00 11752 Cut1 1.0.2 11797 Filter1 1.1.0
1674 578 2013-10-21 10:57:00 11775 Cut1 1.0.2 11798 cat1 1.0.0
1675 578 2013-10-21 10:57:00 11808 Remove beginning1 1.0.0 11799 heatmapper 1.3
1676 578 2013-10-21 10:57:00 11710 Remove beginning1 1.0.0 11806 heatmapper 1.3
1677 578 2013-10-21 10:57:00 11827 Remove_ending 1.0.0 11808 Remove beginning1 1.0.0
1678 578 2013-10-21 10:57:00 11547 Remove_ending 1.0.0 11810 Remove beginning1 1.0.0
1679 578 2013-10-21 10:57:00 11561 heatmapper 1.3 11811 Filter1 1.1.0
1680 578 2013-10-21 10:57:00 11562 heatmapper 1.3 11812 Filter1 1.1.0
1681 578 2013-10-21 10:57:00 11557 heatmapper 1.3 11813 Filter1 1.1.0
1682 578 2013-10-21 10:57:00 11558 heatmapper 1.3 11814 Filter1 1.1.0
1683 578 2013-10-21 10:57:00 11560 heatmapper 1.3 11816 Filter1 1.1.0
1684 578 2013-10-21 10:57:00 11553 heatmapper 1.3 11817 Filter1 1.1.0
1685 578 2013-10-21 10:57:00 11554 heatmapper 1.3 11818 Filter1 1.1.0
1686 578 2013-10-21 10:57:00 11582 Cut1 1.0.2 11819 cat1 1.0.0
1687 578 2013-10-21 10:57:00 11805 heatmapper 1.3 11821 Filter1 1.1.0
1688 578 2013-10-21 10:57:00 11659 cat1 1.0.0 11825 Remove_ending 1.0.0
1689 578 2013-10-21 10:57:00 11617 cat1 1.0.0 11827 Remove_ending 1.0.0
1690 578 2013-10-21 10:57:00 11580 Remove beginning1 1.0.0 11829 heatmapper 1.3
1691 578 2013-10-21 10:57:00 11617 cat1 1.0.0 11830 Remove_ending 1.0.0
1692 578 2013-10-21 10:57:00 11617 cat1 1.0.0 11831 Remove_ending 1.0.0
1693 578 2013-10-21 10:57:00 11553 heatmapper 1.3 11832
1694 578 2013-10-21 10:57:00 11554 heatmapper 1.3 11832
1695 578 2013-10-21 10:57:00 11555 heatmapper 1.3 11832
1696 578 2013-10-21 10:57:00 11556 heatmapper 1.3 11832
1697 578 2013-10-21 10:57:00 11557 heatmapper 1.3 11832
1698 578 2013-10-21 10:57:00 11558 heatmapper 1.3 11832
1699 578 2013-10-21 10:57:00 11560 heatmapper 1.3 11832
1700 578 2013-10-21 10:57:00 11561 heatmapper 1.3 11832
1701 578 2013-10-21 10:57:00 11562 heatmapper 1.3 11832
1702 578 2013-10-21 10:57:00 11592 heatmapper 1.3 11832
1703 578 2013-10-21 10:57:00 11598 heatmapper 1.3 11832
1704 578 2013-10-21 10:57:00 11602 heatmapper 1.3 11832
1705 578 2013-10-21 10:57:00 11633 heatmapper 1.3 11832
1706 578 2013-10-21 10:57:00 11634 heatmapper 1.3 11832
1707 578 2013-10-21 10:57:00 11635 heatmapper 1.3 11832
1708 578 2013-10-21 10:57:00 11664 heatmapper 1.3 11832
1709 578 2013-10-21 10:57:00 11671 heatmapper 1.3 11832
1710 578 2013-10-21 10:57:00 11672 heatmapper 1.3 11832
1711 578 2013-10-21 10:57:00 11674 heatmapper 1.3 11832
1712 578 2013-10-21 10:57:00 11676 heatmapper 1.3 11832
1713 578 2013-10-21 10:57:00 11677 heatmapper 1.3 11832
1714 578 2013-10-21 10:57:00 11705 heatmapper 1.3 11832
1715 578 2013-10-21 10:57:00 11732 heatmapper 1.3 11832
1716 578 2013-10-21 10:57:00 11743 heatmapper 1.3 11832
1717 578 2013-10-21 10:57:00 11799 heatmapper 1.3 11832
1718 578 2013-10-21 10:57:00 11801 heatmapper 1.3 11832
1719 578 2013-10-21 10:57:00 11802 heatmapper 1.3 11832
1720 578 2013-10-21 10:57:00 11803 heatmapper 1.3 11832
1721 578 2013-10-21 10:57:00 11804 heatmapper 1.3 11832
1722 578 2013-10-21 10:57:00 11805 heatmapper 1.3 11832
1723 578 2013-10-21 10:57:00 11569 cshl_word_list_grep 1.0.0 11833
1724 578 2013-10-21 10:57:00 11751 cshl_word_list_grep 1.0.0 11833
1725 578 2013-10-21 10:57:00 11753 cshl_word_list_grep 1.0.0 11833
1726 578 2013-10-21 10:57:00 11577 Filter1 1.1.0 11834
1727 578 2013-10-21 10:57:00 11654 Filter1 1.1.0 11834
1728 578 2013-10-21 10:57:00 11722 Filter1 1.1.0 11834
1729 578 2013-10-21 10:57:00 11797 Filter1 1.1.0 11834
1730 581 2013-10-22 21:26:00 11934 Remove_ending 1.0.0 11900 Remove beginning1 1.0.0
1731 581 2013-10-22 21:26:00 11930 Remove_ending 1.0.0 11904 Remove beginning1 1.0.0
1732 581 2013-10-22 21:26:00 11929 Remove_ending 1.0.0 11905 Remove beginning1 1.0.0
1733 581 2013-10-22 21:26:00 11936 Remove_ending 1.0.0 11906 Remove beginning1 1.0.0
1734 581 2013-10-22 21:26:00 11931 Remove_ending 1.0.0 11907 Remove beginning1 1.0.0
1735 581 2013-10-22 21:26:00 11922 heatmapper 1.3 11909 Filter1 1.1.0
1736 581 2013-10-22 21:26:00 11924 heatmapper 1.3 11911 Filter1 1.1.0
1737 581 2013-10-22 21:26:00 11917 Cut1 1.0.2 11918 cat1 1.0.0
1738 581 2013-10-22 21:26:00 11903 Remove beginning1 1.0.0 11919 heatmapper 1.3
1739 581 2013-10-22 21:26:00 11905 Remove beginning1 1.0.0 11921 heatmapper 1.3
1740 581 2013-10-22 21:26:00 11904 Remove beginning1 1.0.0 11922 heatmapper 1.3
1741 581 2013-10-22 21:26:00 11899 Remove beginning1 1.0.0 11923 heatmapper 1.3
1742 581 2013-10-22 21:26:00 11900 Remove beginning1 1.0.0 11926 heatmapper 1.3
1743 581 2013-10-22 21:26:00 11907 Remove beginning1 1.0.0 11927 heatmapper 1.3
1744 581 2013-10-22 21:26:00 11910 Filter1 1.1.0 11937
1745 581 2013-10-22 21:26:00 11913 Filter1 1.1.0 11937
1746 581 2013-10-22 21:26:00 11916 Filter1 1.1.0 11937
1747 581 2013-10-22 21:26:00 11922 heatmapper 1.3 11938
1748 581 2013-10-22 21:26:00 11924 heatmapper 1.3 11938
1749 584 2013-10-22 10:25:00 11966 Filter1 1.1.0 11963 Filter1 1.1.0
1750 584 2013-10-22 10:25:00 11968 Filter1 1.1.0 11963 Filter1 1.1.0
1751 584 2013-10-22 10:25:00 11969 Filter1 1.1.0 11963 Filter1 1.1.0
1752 584 2013-10-22 10:25:00 11970 Cut1 1.0.2 11965 Filter1 1.1.0
1753 584 2013-10-22 10:25:00 11972 Cut1 1.0.2 11967 Filter1 1.1.0
1754 584 2013-10-22 10:25:00 11977 Cut1 1.0.2 11968 Filter1 1.1.0
1755 584 2013-10-22 10:25:00 11974 Cut1 1.0.2 11969 Filter1 1.1.0
1756 584 2013-10-22 10:25:00 11979 cshl_word_list_grep 1.0.0 11970 Cut1 1.0.2
1757 584 2013-10-22 10:25:00 11981 cshl_word_list_grep 1.0.0 11972 Cut1 1.0.2
1758 584 2013-10-22 10:25:00 11978 cshl_word_list_grep 1.0.0 11973 Cut1 1.0.2
1759 584 2013-10-22 10:25:00 11980 cshl_word_list_grep 1.0.0 11975 Cut1 1.0.2
1760 584 2013-10-22 10:25:00 11962 cshl_word_list_grep 1.0.0 11976 Cut1 1.0.2
1761 584 2013-10-22 10:25:00 11962 cshl_word_list_grep 1.0.0 11982
1762 584 2013-10-22 10:25:00 11978 cshl_word_list_grep 1.0.0 11982
1763 584 2013-10-22 10:25:00 11979 cshl_word_list_grep 1.0.0 11982
1764 584 2013-10-22 10:25:00 11980 cshl_word_list_grep 1.0.0 11982
1765 584 2013-10-22 10:25:00 11981 cshl_word_list_grep 1.0.0 11982
1766 604 2013-10-24 19:24:00 12198 bowtie2 0.2 12201
1767 605 2014-02-28 15:14:00 12211 Remove_ending 1.0.0 12206 Remove beginning1 1.0.0
1768 605 2014-02-28 15:14:00 12233 Remove_ending 1.0.0 12207 Remove beginning1 1.0.0
1769 605 2014-02-28 15:14:00 12239 Remove_ending 1.0.0 12209 Remove beginning1 1.0.0
1770 605 2014-02-28 15:14:00 12234 Remove_ending 1.0.0 12210 Remove beginning1 1.0.0
1771 605 2014-02-28 15:14:00 12225 heatmapper 1.3 12212 Filter1 1.1.0
1772 605 2014-02-28 15:14:00 12229 heatmapper 1.3 12216 Filter1 1.1.0
1773 605 2014-02-28 15:14:00 12231 heatmapper 1.3 12218 Filter1 1.1.0
1774 605 2014-02-28 15:14:00 12230 heatmapper 1.3 12223 Filter1 1.1.0
1775 605 2014-02-28 15:14:00 12209 Remove beginning1 1.0.0 12227 heatmapper 1.3
1776 605 2014-02-28 15:14:00 12204 Remove beginning1 1.0.0 12228 heatmapper 1.3
1777 605 2014-02-28 15:14:00 12210 Remove beginning1 1.0.0 12230 heatmapper 1.3
1778 605 2014-02-28 15:14:00 12205 Remove beginning1 1.0.0 12231 heatmapper 1.3
1779 605 2014-02-28 15:14:00 12212 Filter1 1.1.0 12240
1780 605 2014-02-28 15:14:00 12213 Filter1 1.1.0 12240
1781 605 2014-02-28 15:14:00 12214 Filter1 1.1.0 12240
1782 605 2014-02-28 15:14:00 12215 Filter1 1.1.0 12240
1783 605 2014-02-28 15:14:00 12217 Filter1 1.1.0 12240
1784 605 2014-02-28 15:14:00 12218 Filter1 1.1.0 12240
1785 605 2014-02-28 15:14:00 12225 heatmapper 1.3 12241
1786 605 2014-02-28 15:14:00 12229 heatmapper 1.3 12241
1787 605 2014-02-28 15:14:00 12230 heatmapper 1.3 12241
1788 605 2014-02-28 15:14:00 12231 heatmapper 1.3 12241
1789 611 2013-10-25 07:31:00 12298 rmcontamination 0.1 12296
1790 611 2013-10-25 07:31:00 12301 antismash 2.0.2.1 12300 prokaryotic_ncbi_submission 0.1.1
1791 619 2013-10-25 09:33:00 12370 antismash 2.0.2.1 12369 eukaryotic_ncbi_submission 0.1.2
1792 621 2013-10-27 07:31:00 12378 toolshed.g2.bx.psu.edu/repos/bgruening/unique/bg_uniq/0.3 0.3 12377 toolshed.g2.bx.psu.edu/repos/bjoern-gruening/sed_wrapper/sed_stream_editor/0.0.1 0.0.1
1793 621 2013-10-27 07:31:00 12380 Grep1 1.0.1 12379 toolshed.g2.bx.psu.edu/repos/bgruening/openbabel/ctb_remIons/1.0 1
1794 621 2013-10-27 07:31:00 12383 Cut1 1.0.2 12382 mergeCols1 1.0.1
1795 621 2013-10-27 07:31:00 12384 Filter1 1.1.0 12383 Cut1 1.0.2
1796 621 2013-10-27 07:31:00 12393 Filter1 1.1.0 12389 toolshed.g2.bx.psu.edu/repos/bgruening/chemical_data_sources/ctb_pubchem_download_as_smiles/1.0.0 1.0.0
1797 621 2013-10-27 07:31:00 12394 toolshed.g2.bx.psu.edu/repos/bgruening/openbabel/ctb_change_title/0.0.1 0.0.1 12390 toolshed.g2.bx.psu.edu/repos/bgruening/chemical_data_sources/ctb_online_data_fetch/0.2 0.2
1798 621 2013-10-27 07:31:00 12398 toolshed.g2.bx.psu.edu/repos/bgruening/openbabel/ctb_compound_convert/0.1 0.1 12394 toolshed.g2.bx.psu.edu/repos/bgruening/openbabel/ctb_change_title/0.0.1 0.0.1
1799 621 2013-10-27 07:31:00 12403 toolshed.g2.bx.psu.edu/repos/bgruening/unique/bg_uniq/0.3 0.3 12399 addValue 1.0.0
1800 621 2013-10-27 07:31:00 12404 toolshed.g2.bx.psu.edu/repos/bgruening/unique/bg_uniq/0.3 0.3 12400 addValue 1.0.0
1801 621 2013-10-27 07:31:00 12381 toolshed.g2.bx.psu.edu/repos/bgruening/unique/bg_uniq/0.3 0.3 12401 addValue 1.0.0
1802 621 2013-10-27 07:31:00 12382 mergeCols1 1.0.1 12405 cat1 1.0.0
1803 625 2013-11-03 20:33:00 12448 Filter1 12442
1804 625 2013-11-03 20:33:00 12459 cshl_word_list_grep 12443
1805 625 2013-11-03 20:33:00 12460 cshl_word_list_grep 12443
1806 625 2013-11-03 20:33:00 12461 cshl_word_list_grep 12444
1807 625 2013-11-03 20:33:00 12449 Filter1 12447 Remove beginning1
1808 625 2013-11-03 20:33:00 12452 sort1 12449 Filter1
1809 625 2013-11-03 20:33:00 12454 Grouping1 12451 toolshed.g2.bx.psu.edu/repos/aaronquinlan/bedtools/bedtools_intersectbed_bam/0.1.0
1810 625 2013-11-03 20:33:00 12455 join1 12453 Grouping1
1811 625 2013-11-03 20:33:00 12455 join1 12454 Grouping1
1812 625 2013-11-03 20:33:00 12458 Filter1 12457 join1
1813 625 2013-11-03 20:33:00 12459 cshl_word_list_grep 12457 join1
1814 625 2013-11-03 20:33:00 12460 cshl_word_list_grep 12457 join1
1815 625 2013-11-03 20:33:00 12461 cshl_word_list_grep 12457 join1
1816 625 2013-11-03 20:33:00 12462 Filter1 12458 Filter1
1817 634 2013-11-04 14:27:00 12553 Cut1 1.0.2 12551 join1 2.0.2
1818 634 2013-11-04 14:27:00 12556 Grouping1 2.0.0 12554 toolshed.g2.bx.psu.edu/repos/aaronquinlan/bedtools/bedtools_intersectbed_bam/0.1.0 0.1.0
1819 634 2013-11-04 14:27:00 12554 toolshed.g2.bx.psu.edu/repos/aaronquinlan/bedtools/bedtools_intersectbed_bam/0.1.0 0.1.0 12555 Filter1 1.1.0
1820 634 2013-11-04 14:27:00 12557 toolshed.g2.bx.psu.edu/repos/aaronquinlan/bedtools/bedtools_intersectbed_bam/0.1.0 0.1.0 12555 Filter1 1.1.0
1821 634 2013-11-04 14:27:00 12558 join1 2.0.2 12556 Grouping1 2.0.0
1822 634 2013-11-04 14:27:00 12559 Grouping1 2.0.0 12557 toolshed.g2.bx.psu.edu/repos/aaronquinlan/bedtools/bedtools_intersectbed_bam/0.1.0 0.1.0
1823 634 2013-11-04 14:27:00 12558 join1 2.0.2 12559 Grouping1 2.0.0
1824 634 2013-11-04 14:27:00 12554 toolshed.g2.bx.psu.edu/repos/aaronquinlan/bedtools/bedtools_intersectbed_bam/0.1.0 0.1.0 12561
1825 634 2013-11-04 14:27:00 12557 toolshed.g2.bx.psu.edu/repos/aaronquinlan/bedtools/bedtools_intersectbed_bam/0.1.0 0.1.0 12563
1826 635 2013-11-06 02:07:00 12567 blockbuster 0.1 12564 sort1 1.0.2
1827 635 2013-11-06 02:07:00 12564 sort1 1.0.2 12565 blockclust 0.1
1828 635 2013-11-06 02:07:00 12566 blockclust 0.1 12567 blockbuster 0.1
1829 638 2013-11-05 22:36:00 12580 cshl_word_list_grep 1.0.0 12575 Cut1 1.0.2
1830 638 2013-11-05 22:36:00 12581 cshl_word_list_grep 1.0.0 12576 Cut1 1.0.2
1831 638 2013-11-05 22:36:00 12584 Filter1 1.1.0 12583 Filter1 1.1.0
1832 638 2013-11-05 22:36:00 12586 Filter1 1.1.0 12583 Filter1 1.1.0
1833 638 2013-11-05 22:36:00 12587 Filter1 1.1.0 12583 Filter1 1.1.0
1834 638 2013-11-05 22:36:00 12575 Cut1 1.0.2 12584 Filter1 1.1.0
1835 638 2013-11-05 22:36:00 12576 Cut1 1.0.2 12585 Filter1 1.1.0
1836 638 2013-11-05 22:36:00 12580 cshl_word_list_grep 1.0.0 12588
1837 638 2013-11-05 22:36:00 12581 cshl_word_list_grep 1.0.0 12588
1838 638 2013-11-05 22:36:00 12583 Filter1 1.1.0 12589
1839 644 2013-11-06 00:51:00 12627 sort1 1.0.2 12628 blockclust 0.1
1840 644 2013-11-06 00:51:00 12632 Extract genomic DNA 1 2.2.2 12629 blockclust 0.1
1841 646 2013-11-06 03:38:00 12642 Extract genomic DNA 1 2.2.2 12640 blockclust 0.1
1842 646 2013-11-06 03:38:00 12643 blockclust 0.1 12640 blockclust 0.1
1843 646 2013-11-06 03:38:00 12643 blockclust 0.1 12640 blockclust 0.1
1844 646 2013-11-06 03:38:00 12643 blockclust 0.1 12641 infernal_cmsearch 1.1.0.1
1845 646 2013-11-06 03:38:00 12641 infernal_cmsearch 1.1.0.1 12642 Extract genomic DNA 1 2.2.2
1846 647 2013-11-06 03:38:00 12645 blockclust 0.1 12646 blockbuster 0.1
1847 661 2013-11-08 15:36:00 12688 toolshed.g2.bx.psu.edu/repos/bgruening/openbabel/ctb_compound_convert/0.1 0.1 12687 toolshed.g2.bx.psu.edu/repos/bgruening/unique/bg_uniq/0.3 0.3
1848 664 2013-11-08 22:15:00 12695 samtools_rmdup 1.0.0 12696 tophat2 0.5
1849 668 2013-11-11 15:32:00 12713 toolshed.g2.bx.psu.edu/repos/bgruening/unique/bg_uniq/0.3 12712 fragmenter
1850 668 2013-11-11 15:32:00 12714 toolshed.g2.bx.psu.edu/repos/bgruening/openbabel/ctb_compound_convert/0.1 12713 toolshed.g2.bx.psu.edu/repos/bgruening/unique/bg_uniq/0.3
1851 669 2013-11-11 15:35:00 12716 toolshed.g2.bx.psu.edu/repos/bgruening/openbabel/ctb_compound_convert/0.1 0.1 12715 toolshed.g2.bx.psu.edu/repos/bgruening/openbabel/ctb_filter/1.0 1
1852 669 2013-11-11 15:35:00 12715 toolshed.g2.bx.psu.edu/repos/bgruening/openbabel/ctb_filter/1.0 1 12717 toolshed.g2.bx.psu.edu/repos/bgruening/openbabel/ctb_remSmall/1.0 1
1853 669 2013-11-11 15:35:00 12718 toolshed.g2.bx.psu.edu/repos/bgruening/openbabel/ctb_remIons/1.0 1 12719
1854 670 2013-11-11 15:48:00 12722 toolshed.g2.bx.psu.edu/repos/bgruening/openbabel/ctb_compound_convert/0.1 0.1 12721 bgchem_fragment_merger 0.1
1855 678 2013-11-13 09:31:00 12792 join1 2.0.2 12780 Cut1 1.0.2
1856 678 2013-11-13 09:31:00 12799 join1 2.0.2 12783 Cut1 1.0.2
1857 678 2013-11-13 09:31:00 12798 join1 2.0.2 12787 Cut1 1.0.2
1858 678 2013-11-13 09:31:00 12791 join1 2.0.2 12789 Cut1 1.0.2
1859 678 2013-11-13 09:31:00 12799 join1 2.0.2 12792 join1 2.0.2
1860 678 2013-11-13 09:31:00 12792 join1 2.0.2 12794 join1 2.0.2
1861 678 2013-11-13 09:31:00 12791 join1 2.0.2 12796 join1 2.0.2
1862 678 2013-11-13 09:31:00 12798 join1 2.0.2 12799 join1 2.0.2
1863 678 2013-11-13 09:31:00 12780 Cut1 1.0.2 12800
1864 678 2013-11-13 09:31:00 12782 Cut1 1.0.2 12802
1865 678 2013-11-13 09:31:00 12784 Cut1 1.0.2 12804
1866 678 2013-11-13 09:31:00 12785 Cut1 1.0.2 12805
1867 678 2013-11-13 09:31:00 12788 Cut1 1.0.2 12808
1868 682 2013-11-13 13:42:00 12888 Paste1 1.0.0 12861 Cut1 1.0.2
1869 682 2013-11-13 13:42:00 12887 Paste1 1.0.0 12862 Cut1 1.0.2
1870 682 2013-11-13 13:42:00 12886 Paste1 1.0.0 12863 Cut1 1.0.2
1871 682 2013-11-13 13:42:00 12885 Paste1 1.0.0 12864 Cut1 1.0.2
1872 682 2013-11-13 13:42:00 12883 Paste1 1.0.0 12865 Cut1 1.0.2
1873 682 2013-11-13 13:42:00 12883 Paste1 1.0.0 12866 Cut1 1.0.2
1874 682 2013-11-13 13:42:00 12889 Paste1 1.0.0 12868 Cut1 1.0.2
1875 682 2013-11-13 13:42:00 12884 Paste1 1.0.0 12869 Cut1 1.0.2
1876 682 2013-11-13 13:42:00 12871 Paste1 1.0.0 12870 Cut1 1.0.2
1877 682 2013-11-13 13:42:00 12865 Cut1 1.0.2 12873 sort1 1.0.2
1878 682 2013-11-13 13:42:00 12868 Cut1 1.0.2 12874 sort1 1.0.2
1879 682 2013-11-13 13:42:00 12867 Cut1 1.0.2 12875 sort1 1.0.2
1880 682 2013-11-13 13:42:00 12861 Cut1 1.0.2 12877 sort1 1.0.2
1881 682 2013-11-13 13:42:00 12889 Paste1 1.0.0 12882 Paste1 1.0.0
1882 682 2013-11-13 13:42:00 12871 Paste1 1.0.0 12884 Paste1 1.0.0
1883 682 2013-11-13 13:42:00 12884 Paste1 1.0.0 12885 Paste1 1.0.0
1884 682 2013-11-13 13:42:00 12885 Paste1 1.0.0 12886 Paste1 1.0.0
1885 682 2013-11-13 13:42:00 12886 Paste1 1.0.0 12887 Paste1 1.0.0
1886 682 2013-11-13 13:42:00 12887 Paste1 1.0.0 12888 Paste1 1.0.0
1887 682 2013-11-13 13:42:00 12888 Paste1 1.0.0 12889 Paste1 1.0.0
1888 682 2013-11-13 13:42:00 12872 sort1 1.0.2 12890
1889 682 2013-11-13 13:42:00 12874 sort1 1.0.2 12892
1890 682 2013-11-13 13:42:00 12877 sort1 1.0.2 12895
1891 682 2013-11-13 13:42:00 12878 sort1 1.0.2 12896
1892 682 2013-11-13 13:42:00 12881 sort1 1.0.2 12899
1893 685 2013-11-13 17:06:00 12930 bamCoverage_deepTools 1 12931 sam_merge2 1.1.2
1894 685 2013-11-13 17:06:00 12934 bowtie2 0.2 12932 toolshed.g2.bx.psu.edu/repos/bgruening/trim_galore/trim_galore/0.2.8.1 0.2.8.1
1895 685 2013-11-13 17:06:00 12934 bowtie2 0.2 12932 toolshed.g2.bx.psu.edu/repos/bgruening/trim_galore/trim_galore/0.2.8.1 0.2.8.1
1896 685 2013-11-13 17:06:00 12932 toolshed.g2.bx.psu.edu/repos/bgruening/trim_galore/trim_galore/0.2.8.1 0.2.8.1 12938
1897 685 2013-11-13 17:06:00 12932 toolshed.g2.bx.psu.edu/repos/bgruening/trim_galore/trim_galore/0.2.8.1 0.2.8.1 12939
1898 690 2013-11-13 21:03:00 12986 heatmapper 1.3 12984
1899 690 2013-11-13 21:03:00 12986 heatmapper 1.3 12985
1900 690 2013-11-13 21:03:00 12987 Cut1 1.0.2 12986 heatmapper 1.3
1901 696 2013-11-14 20:39:00 13090 Paste1 1.0.0 13085 Cut1 1.0.2
1902 696 2013-11-14 20:39:00 13090 Paste1 1.0.0 13087 Paste1 1.0.0
1903 696 2013-11-14 20:39:00 13094 Cut1 1.0.2 13091 heatmapper 1.3
1904 696 2013-11-14 20:39:00 13086 Cut1 1.0.2 13093 heatmapper 1.3
1905 696 2013-11-14 20:39:00 13092 heatmapper 1.3 13097
1906 696 2013-11-14 20:39:00 13092 heatmapper 1.3 13098
1907 697 2013-11-14 20:40:00 13105 Cut1 1.0.2 13102 heatmapper 1.3
1908 697 2013-11-14 20:40:00 13101 Cut1 1.0.2 13112 heatmapper 1.3
1909 697 2013-11-14 20:40:00 13103 Cut1 1.0.2 13114 heatmapper 1.3
1910 698 2013-11-15 21:05:00 13122 computeMatrix 1 13121 bamCoverage_deepTools 1
1911 698 2013-11-15 21:05:00 13126 heatmapper_deepTools 1 13122 computeMatrix 1
1912 698 2013-11-15 21:05:00 13122 computeMatrix 1 13123
1913 698 2013-11-15 21:05:00 13128 correctGCBias 1.0.1 13124
1914 698 2013-11-15 21:05:00 13130 bamFingerprint 1 13124
1915 698 2013-11-15 21:05:00 13130 bamFingerprint 1 13124
1916 698 2013-11-15 21:05:00 13128 correctGCBias 1.0.1 13129 deeptools_computeGCBias 1.0.1
1917 700 2013-11-15 21:24:00 13135 toolshed.g2.bx.psu.edu/repos/bgruening/deeptools/deeptools_computeMatrix/1.0 1 13132
1918 700 2013-11-15 21:24:00 13136 toolshed.g2.bx.psu.edu/repos/bgruening/deeptools/deeptools_bamCoverage/1.0 1 13133
1919 700 2013-11-15 21:24:00 13135 toolshed.g2.bx.psu.edu/repos/bgruening/deeptools/deeptools_computeMatrix/1.0 1 13133
1920 700 2013-11-15 21:24:00 13137 toolshed.g2.bx.psu.edu/repos/bgruening/deeptools/deeptools_bamCompare/1.0 1 13133
1921 700 2013-11-15 21:24:00 13137 toolshed.g2.bx.psu.edu/repos/bgruening/deeptools/deeptools_bamCompare/1.0 1 13134
1922 700 2013-11-15 21:24:00 13143 toolshed.g2.bx.psu.edu/repos/bgruening/deeptools/deeptools_correctGCBias/1.0.1 1.0.1 13134
1923 700 2013-11-15 21:24:00 13141 toolshed.g2.bx.psu.edu/repos/bgruening/deeptools/deeptools_heatmapper/1.0 1 13135 toolshed.g2.bx.psu.edu/repos/bgruening/deeptools/deeptools_computeMatrix/1.0 1
1924 700 2013-11-15 21:24:00 13143 toolshed.g2.bx.psu.edu/repos/bgruening/deeptools/deeptools_correctGCBias/1.0.1 1.0.1 13139 toolshed.g2.bx.psu.edu/repos/bgruening/deeptools/deeptools_computeGCBias/1.0.1 1.0.1
1925 702 2013-11-15 22:23:00 13161 toolshed.g2.bx.psu.edu/repos/aaronquinlan/bedtools/bedtools_intersectbed_bam/0.1.0 0.1.0 13160 Cut1 1.0.2
1926 702 2013-11-15 22:23:00 13161 toolshed.g2.bx.psu.edu/repos/aaronquinlan/bedtools/bedtools_intersectbed_bam/0.1.0 0.1.0 13162
1927 702 2013-11-15 22:23:00 13160 Cut1 1.0.2 13165 addValue 1.0.0
1928 703 2013-11-17 19:53:00 13174 toolshed.g2.bx.psu.edu/repos/devteam/bwa_wrappers/bwa_wrapper/1.2.3 1.2.3 13169
1929 703 2013-11-17 19:53:00 13174 toolshed.g2.bx.psu.edu/repos/devteam/bwa_wrappers/bwa_wrapper/1.2.3 1.2.3 13170
1930 703 2013-11-17 19:53:00 13175 toolshed.g2.bx.psu.edu/repos/devteam/sam_bitwise_flag_filter/sam_bw_filter/1.0.0 1.0.0 13173 toolshed.g2.bx.psu.edu/repos/devteam/bwa_wrappers/bwa_wrapper/1.2.3 1.2.3
1931 703 2013-11-17 19:53:00 13176 toolshed.g2.bx.psu.edu/repos/devteam/sam_bitwise_flag_filter/sam_bw_filter/1.0.0 1.0.0 13174 toolshed.g2.bx.psu.edu/repos/devteam/bwa_wrappers/bwa_wrapper/1.2.3 1.2.3
1932 703 2013-11-17 19:53:00 13177 toolshed.g2.bx.psu.edu/repos/devteam/sam_to_bam/sam_to_bam/1.1.2 1.1.2 13175 toolshed.g2.bx.psu.edu/repos/devteam/sam_bitwise_flag_filter/sam_bw_filter/1.0.0 1.0.0
1933 703 2013-11-17 19:53:00 13182 toolshed.g2.bx.psu.edu/repos/blankenberg/naive_variant_caller/naive_variant_caller/0.0.1 13181 toolshed.g2.bx.psu.edu/repos/devteam/sam_merge/sam_merge2/1.1.2 1.1.2
1934 703 2013-11-17 19:53:00 13183 toolshed.g2.bx.psu.edu/repos/devteam/freebayes/freebayes/0.0.3 0.0.3 13181 toolshed.g2.bx.psu.edu/repos/devteam/sam_merge/sam_merge2/1.1.2 1.1.2
1935 703 2013-11-17 19:53:00 13185 Filter1 1.1.0 13184 toolshed.g2.bx.psu.edu/repos/nick/allele_counts/allele_counts_1/1.1
1936 713 2013-11-24 11:36:00 13266 toolshed.g2.bx.psu.edu/repos/devteam/bwa_wrappers/bwa_wrapper/1.2.3 1.2.3 13260
1937 713 2013-11-24 11:36:00 13266 toolshed.g2.bx.psu.edu/repos/devteam/bwa_wrappers/bwa_wrapper/1.2.3 1.2.3 13261
1938 713 2013-11-24 11:36:00 13267 toolshed.g2.bx.psu.edu/repos/devteam/bwa_wrappers/bwa_wrapper/1.2.3 1.2.3 13262
1939 713 2013-11-24 11:36:00 13267 toolshed.g2.bx.psu.edu/repos/devteam/bwa_wrappers/bwa_wrapper/1.2.3 1.2.3 13263
1940 713 2013-11-24 11:36:00 13268 toolshed.g2.bx.psu.edu/repos/devteam/sam_bitwise_flag_filter/sam_bw_filter/1.0.0 1.0.0 13266 toolshed.g2.bx.psu.edu/repos/devteam/bwa_wrappers/bwa_wrapper/1.2.3 1.2.3
1941 713 2013-11-24 11:36:00 13269 toolshed.g2.bx.psu.edu/repos/devteam/sam_bitwise_flag_filter/sam_bw_filter/1.0.0 1.0.0 13267 toolshed.g2.bx.psu.edu/repos/devteam/bwa_wrappers/bwa_wrapper/1.2.3 1.2.3
1942 713 2013-11-24 11:36:00 13270 toolshed.g2.bx.psu.edu/repos/devteam/sam_to_bam/sam_to_bam/1.1.2 1.1.2 13268 toolshed.g2.bx.psu.edu/repos/devteam/sam_bitwise_flag_filter/sam_bw_filter/1.0.0 1.0.0
1943 713 2013-11-24 11:36:00 13272 toolshed.g2.bx.psu.edu/repos/devteam/picard/picard_ARRG/1.56.0 1.56.0 13270 toolshed.g2.bx.psu.edu/repos/devteam/sam_to_bam/sam_to_bam/1.1.2 1.1.2
1944 713 2013-11-24 11:36:00 13273 toolshed.g2.bx.psu.edu/repos/devteam/picard/picard_ARRG/1.56.0 1.56.0 13271 toolshed.g2.bx.psu.edu/repos/devteam/sam_to_bam/sam_to_bam/1.1.2 1.1.2
1945 713 2013-11-24 11:36:00 13276 toolshed.g2.bx.psu.edu/repos/devteam/freebayes/freebayes/0.0.3 0.0.3 13274 toolshed.g2.bx.psu.edu/repos/devteam/sam_merge/sam_merge2/1.1.2 1.1.2
1946 717 2013-12-09 21:29:00 13316 cor2 1.0.0 13317 Cut1 1.0.2
1947 717 2013-12-09 21:29:00 13320 Grouping1 2.0.0 13319 toolshed.g2.bx.psu.edu/repos/aaronquinlan/bedtools/bedtools_intersectbed_bam/0.1.0 0.1.0
1948 717 2013-12-09 21:29:00 13318 Filter1 1.1.0 13322
1949 718 2013-12-10 08:51:00 13328 addValue 1.0.0 13326 Cut1 1.0.2
1950 718 2013-12-10 08:51:00 13329 Cut1 1.0.2 13327 Remove beginning1 1.0.0
1951 718 2013-12-10 08:51:00 13331 Paste1 1.0.0 13328 addValue 1.0.0
1952 718 2013-12-10 08:51:00 13331 Paste1 1.0.0 13329 Cut1 1.0.2
1953 718 2013-12-10 08:51:00 13325 Grep1 1.0.1 13332
1954 734 2014-01-13 08:35:00 13513 toolshed.g2.bx.psu.edu/repos/iuc/gatk2/gatk2_haplotype_caller/0.0.7 0.0.7 13514 toolshed.g2.bx.psu.edu/repos/iuc/gatk2/gatk2_print_reads/0.0.7 0.0.7
1955 734 2014-01-13 08:35:00 13517 toolshed.g2.bx.psu.edu/repos/iuc/gatk2/gatk2_indel_realigner/0.0.7 0.0.7 13515 toolshed.g2.bx.psu.edu/repos/iuc/gatk2/gatk2_realigner_target_creator/0.0.7 0.0.7
1956 734 2014-01-13 08:35:00 13514 toolshed.g2.bx.psu.edu/repos/iuc/gatk2/gatk2_print_reads/0.0.7 0.0.7 13516 toolshed.g2.bx.psu.edu/repos/iuc/gatk2/gatk2_base_recalibrator/0.0.7 0.0.7
1957 734 2014-01-13 08:35:00 13514 toolshed.g2.bx.psu.edu/repos/iuc/gatk2/gatk2_print_reads/0.0.7 0.0.7 13517 toolshed.g2.bx.psu.edu/repos/iuc/gatk2/gatk2_indel_realigner/0.0.7 0.0.7
1958 734 2014-01-13 08:35:00 13516 toolshed.g2.bx.psu.edu/repos/iuc/gatk2/gatk2_base_recalibrator/0.0.7 0.0.7 13517 toolshed.g2.bx.psu.edu/repos/iuc/gatk2/gatk2_indel_realigner/0.0.7 0.0.7
1959 734 2014-01-13 08:35:00 13516 toolshed.g2.bx.psu.edu/repos/iuc/gatk2/gatk2_base_recalibrator/0.0.7 0.0.7 13518
1960 734 2014-01-13 08:35:00 13517 toolshed.g2.bx.psu.edu/repos/iuc/gatk2/gatk2_indel_realigner/0.0.7 0.0.7 13518
1961 734 2014-01-13 08:35:00 13516 toolshed.g2.bx.psu.edu/repos/iuc/gatk2/gatk2_base_recalibrator/0.0.7 0.0.7 13519
1962 734 2014-01-13 08:35:00 13517 toolshed.g2.bx.psu.edu/repos/iuc/gatk2/gatk2_indel_realigner/0.0.7 0.0.7 13519
1963 734 2014-01-13 08:35:00 13516 toolshed.g2.bx.psu.edu/repos/iuc/gatk2/gatk2_base_recalibrator/0.0.7 0.0.7 13520
1964 734 2014-01-13 08:35:00 13517 toolshed.g2.bx.psu.edu/repos/iuc/gatk2/gatk2_indel_realigner/0.0.7 0.0.7 13520
1965 734 2014-01-13 08:35:00 13517 toolshed.g2.bx.psu.edu/repos/iuc/gatk2/gatk2_indel_realigner/0.0.7 0.0.7 13521
1966 743 2014-02-27 10:34:00 13631 cshl_word_list_grep 1.0.0 13625 Cut1 1.0.2
1967 743 2014-02-27 10:34:00 13633 cshl_word_list_grep 1.0.0 13627 Cut1 1.0.2
1968 743 2014-02-27 10:34:00 13634 cshl_word_list_grep 1.0.0 13628 Cut1 1.0.2
1969 743 2014-02-27 10:34:00 13635 cshl_word_list_grep 1.0.0 13630 Cut1 1.0.2
1970 743 2014-02-27 10:34:00 13639 Filter1 1.1.0 13637 Filter1 1.1.0
1971 743 2014-02-27 10:34:00 13640 Filter1 1.1.0 13637 Filter1 1.1.0
1972 743 2014-02-27 10:34:00 13641 Filter1 1.1.0 13637 Filter1 1.1.0
1973 743 2014-02-27 10:34:00 13626 Cut1 1.0.2 13639 Filter1 1.1.0
1974 743 2014-02-27 10:34:00 13628 Cut1 1.0.2 13641 Filter1 1.1.0
1975 743 2014-02-27 10:34:00 13629 cshl_word_list_grep 1.0.0 13642 Cut1 1.0.2
1976 743 2014-02-27 10:34:00 13629 cshl_word_list_grep 1.0.0 13644
1977 743 2014-02-27 10:34:00 13631 cshl_word_list_grep 1.0.0 13644
1978 743 2014-02-27 10:34:00 13633 cshl_word_list_grep 1.0.0 13644
1979 743 2014-02-27 10:34:00 13634 cshl_word_list_grep 1.0.0 13644
1980 743 2014-02-27 10:34:00 13635 cshl_word_list_grep 1.0.0 13644
1981 743 2014-02-27 10:34:00 13637 Filter1 1.1.0 13645
1982 749 2014-02-03 15:45:00 13705 toolshed.g2.bx.psu.edu/repos/iuc/gatk2/gatk2_print_reads/0.0.7 0.0.7 13703 toolshed.g2.bx.psu.edu/repos/iuc/gatk2/gatk2_indel_realigner/0.0.7 0.0.7
1983 749 2014-02-03 15:45:00 13706 toolshed.g2.bx.psu.edu/repos/iuc/gatk2/gatk2_base_recalibrator/0.0.7 0.0.7 13703 toolshed.g2.bx.psu.edu/repos/iuc/gatk2/gatk2_indel_realigner/0.0.7 0.0.7
1984 749 2014-02-03 15:45:00 13705 toolshed.g2.bx.psu.edu/repos/iuc/gatk2/gatk2_print_reads/0.0.7 0.0.7 13706 toolshed.g2.bx.psu.edu/repos/iuc/gatk2/gatk2_base_recalibrator/0.0.7 0.0.7
1985 749 2014-02-03 15:45:00 13707 toolshed.g2.bx.psu.edu/repos/iuc/gatk2/gatk2_variant_select/0.0.7 0.0.7 13708 toolshed.g2.bx.psu.edu/repos/iuc/gatk2/gatk2_haplotype_caller/0.0.7 0.0.7
1986 749 2014-02-03 15:45:00 13704 toolshed.g2.bx.psu.edu/repos/iuc/gatk2/gatk2_realigner_target_creator/0.0.7 0.0.7 13709
1987 749 2014-02-03 15:45:00 13706 toolshed.g2.bx.psu.edu/repos/iuc/gatk2/gatk2_base_recalibrator/0.0.7 0.0.7 13709
1988 749 2014-02-03 15:45:00 13704 toolshed.g2.bx.psu.edu/repos/iuc/gatk2/gatk2_realigner_target_creator/0.0.7 0.0.7 13710
1989 749 2014-02-03 15:45:00 13704 toolshed.g2.bx.psu.edu/repos/iuc/gatk2/gatk2_realigner_target_creator/0.0.7 0.0.7 13711
1990 749 2014-02-03 15:45:00 13706 toolshed.g2.bx.psu.edu/repos/iuc/gatk2/gatk2_base_recalibrator/0.0.7 0.0.7 13711
1991 749 2014-02-03 15:45:00 13706 toolshed.g2.bx.psu.edu/repos/iuc/gatk2/gatk2_base_recalibrator/0.0.7 0.0.7 13712
1992 760 2014-02-04 19:19:00 13755 toolshed.g2.bx.psu.edu/repos/iuc/gatk2/gatk2_variant_select/0.0.7 0.0.7 13759
1993 765 2014-02-05 18:03:00 13788 toolshed.g2.bx.psu.edu/repos/devteam/cufflinks/cufflinks/0.0.6 0.0.6 13786 toolshed.g2.bx.psu.edu/repos/devteam/samtools_rmdup/samtools_rmdup/1.0.0 1.0.0
1994 765 2014-02-05 18:03:00 13789 bamCoverage_deepTools 1 13786 toolshed.g2.bx.psu.edu/repos/devteam/samtools_rmdup/samtools_rmdup/1.0.0 1.0.0
1995 765 2014-02-05 18:03:00 13786 toolshed.g2.bx.psu.edu/repos/devteam/samtools_rmdup/samtools_rmdup/1.0.0 1.0.0 13787 tophat2 0.6
1996 765 2014-02-05 18:03:00 13785 toolshed.g2.bx.psu.edu/repos/bgruening/trim_galore/trim_galore/0.2.8.1 0.2.8.1 13791
1997 765 2014-02-05 18:03:00 13785 toolshed.g2.bx.psu.edu/repos/bgruening/trim_galore/trim_galore/0.2.8.1 0.2.8.1 13792
1998 765 2014-02-05 18:03:00 13788 toolshed.g2.bx.psu.edu/repos/devteam/cufflinks/cufflinks/0.0.6 0.0.6 13794
1999 775 2014-02-06 20:19:00 13846 toolshed.g2.bx.psu.edu/repos/iuc/snpeff/snpEff/3.4 3.4 13847
2000 783 2014-02-10 15:01:00 13927 bowtie2 13895
2001 783 2014-02-10 15:01:00 13928 bowtie2 13895
2002 783 2014-02-10 15:01:00 13927 bowtie2 13896
2003 783 2014-02-10 15:01:00 13928 bowtie2 13896
2004 783 2014-02-10 15:01:00 13929 bowtie2 13897
2005 783 2014-02-10 15:01:00 13929 bowtie2 13898
2006 783 2014-02-10 15:01:00 13931 bowtie2 13899
2007 783 2014-02-10 15:01:00 13932 bowtie2 13899
2008 783 2014-02-10 15:01:00 13931 bowtie2 13900
2009 783 2014-02-10 15:01:00 13932 bowtie2 13900
2010 783 2014-02-10 15:01:00 13948 toolshed.g2.bx.psu.edu/repos/iuc/gatk2/gatk2_realigner_target_creator/0.0.7 13901
2011 783 2014-02-10 15:01:00 13970 toolshed.g2.bx.psu.edu/repos/iuc/gatk2/gatk2_realigner_target_creator/0.0.7 13901
2012 783 2014-02-10 15:01:00 13973 toolshed.g2.bx.psu.edu/repos/iuc/gatk2/gatk2_indel_realigner/0.0.7 13901
2013 783 2014-02-10 15:01:00 13974 toolshed.g2.bx.psu.edu/repos/iuc/gatk2/gatk2_base_recalibrator/0.0.7 13901
2014 783 2014-02-10 15:01:00 13971 toolshed.g2.bx.psu.edu/repos/iuc/gatk2/gatk2_realigner_target_creator/0.0.7 13901
2015 783 2014-02-10 15:01:00 13972 toolshed.g2.bx.psu.edu/repos/iuc/gatk2/gatk2_realigner_target_creator/0.0.7 13901
2016 783 2014-02-10 15:01:00 13970 toolshed.g2.bx.psu.edu/repos/iuc/gatk2/gatk2_realigner_target_creator/0.0.7 13902
2017 783 2014-02-10 15:01:00 13973 toolshed.g2.bx.psu.edu/repos/iuc/gatk2/gatk2_indel_realigner/0.0.7 13902
2018 783 2014-02-10 15:01:00 13974 toolshed.g2.bx.psu.edu/repos/iuc/gatk2/gatk2_base_recalibrator/0.0.7 13902
2019 783 2014-02-10 15:01:00 13971 toolshed.g2.bx.psu.edu/repos/iuc/gatk2/gatk2_realigner_target_creator/0.0.7 13902
2020 783 2014-02-10 15:01:00 13972 toolshed.g2.bx.psu.edu/repos/iuc/gatk2/gatk2_realigner_target_creator/0.0.7 13902
2021 783 2014-02-10 15:01:00 13942 toolshed.g2.bx.psu.edu/repos/aaronquinlan/bedtools/bedtools_intersectbed_bam/0.1.0 13903
2022 783 2014-02-10 15:01:00 13948 toolshed.g2.bx.psu.edu/repos/iuc/gatk2/gatk2_realigner_target_creator/0.0.7 13903
2023 783 2014-02-10 15:01:00 13970 toolshed.g2.bx.psu.edu/repos/iuc/gatk2/gatk2_realigner_target_creator/0.0.7 13903
2024 783 2014-02-10 15:01:00 13973 toolshed.g2.bx.psu.edu/repos/iuc/gatk2/gatk2_indel_realigner/0.0.7 13903
2025 783 2014-02-10 15:01:00 13974 toolshed.g2.bx.psu.edu/repos/iuc/gatk2/gatk2_base_recalibrator/0.0.7 13903
2026 783 2014-02-10 15:01:00 13971 toolshed.g2.bx.psu.edu/repos/iuc/gatk2/gatk2_realigner_target_creator/0.0.7 13903
2027 783 2014-02-10 15:01:00 13972 toolshed.g2.bx.psu.edu/repos/iuc/gatk2/gatk2_realigner_target_creator/0.0.7 13903
2028 783 2014-02-10 15:01:00 13934 toolshed.g2.bx.psu.edu/repos/aaronquinlan/bedtools/bedtools_intersectbed_bam/0.1.0 13916 toolshed.g2.bx.psu.edu/repos/aaronquinlan/bedtools/bedtools_intersectbed_bam/0.1.0
2029 783 2014-02-10 15:01:00 13934 toolshed.g2.bx.psu.edu/repos/aaronquinlan/bedtools/bedtools_intersectbed_bam/0.1.0 13917 toolshed.g2.bx.psu.edu/repos/aaronquinlan/bedtools/bedtools_intersectbed_bam/0.1.0
2030 783 2014-02-10 15:01:00 13936 toolshed.g2.bx.psu.edu/repos/iuc/gatk2/gatk2_variant_filtration/0.0.7 13923 toolshed.g2.bx.psu.edu/repos/iuc/gatk2/gatk2_variant_filtration/0.0.7
2031 783 2014-02-10 15:01:00 13937 toolshed.g2.bx.psu.edu/repos/devteam/vcftools_isec/vcftools_isec/0.1 13924 toolshed.g2.bx.psu.edu/repos/iuc/gatk2/gatk2_variant_select/0.0.7
2032 783 2014-02-10 15:01:00 13951 toolshed.g2.bx.psu.edu/repos/devteam/vcftools_isec/vcftools_isec/0.1 13925 toolshed.g2.bx.psu.edu/repos/iuc/gatk2/gatk2_variant_select/0.0.7
2033 783 2014-02-10 15:01:00 13937 toolshed.g2.bx.psu.edu/repos/devteam/vcftools_isec/vcftools_isec/0.1 13926 toolshed.g2.bx.psu.edu/repos/iuc/gatk2/gatk2_variant_select/0.0.7
2034 783 2014-02-10 15:01:00 13940 toolshed.g2.bx.psu.edu/repos/devteam/samtools_rmdup/samtools_rmdup/1.0.0 13932 bowtie2
2035 783 2014-02-10 15:01:00 13942 toolshed.g2.bx.psu.edu/repos/aaronquinlan/bedtools/bedtools_intersectbed_bam/0.1.0 13934 toolshed.g2.bx.psu.edu/repos/aaronquinlan/bedtools/bedtools_intersectbed_bam/0.1.0
2036 783 2014-02-10 15:01:00 13943 toolshed.g2.bx.psu.edu/repos/iuc/snpeff/snpSift_filter/3.4 13937 toolshed.g2.bx.psu.edu/repos/devteam/vcftools_isec/vcftools_isec/0.1
2037 783 2014-02-10 15:01:00 13944 toolshed.g2.bx.psu.edu/repos/iuc/snpeff/snpSift_filter/3.4 13937 toolshed.g2.bx.psu.edu/repos/devteam/vcftools_isec/vcftools_isec/0.1
2038 783 2014-02-10 15:01:00 13945 toolshed.g2.bx.psu.edu/repos/iuc/snpeff/snpSift_filter/3.4 13937 toolshed.g2.bx.psu.edu/repos/devteam/vcftools_isec/vcftools_isec/0.1
2039 783 2014-02-10 15:01:00 13946 toolshed.g2.bx.psu.edu/repos/iuc/snpeff/snpSift_filter/3.4 13937 toolshed.g2.bx.psu.edu/repos/devteam/vcftools_isec/vcftools_isec/0.1
2040 783 2014-02-10 15:01:00 13948 toolshed.g2.bx.psu.edu/repos/iuc/gatk2/gatk2_realigner_target_creator/0.0.7 13939 toolshed.g2.bx.psu.edu/repos/devteam/samtools_rmdup/samtools_rmdup/1.0.0
2041 783 2014-02-10 15:01:00 13968 cshl_word_list_grep 13941 Cut1
2042 783 2014-02-10 15:01:00 13951 toolshed.g2.bx.psu.edu/repos/devteam/vcftools_isec/vcftools_isec/0.1 13946 toolshed.g2.bx.psu.edu/repos/iuc/snpeff/snpSift_filter/3.4
2043 783 2014-02-10 15:01:00 13964 toolshed.g2.bx.psu.edu/repos/iuc/gatk2/gatk2_print_reads/0.0.7 13955 toolshed.g2.bx.psu.edu/repos/iuc/gatk2/gatk2_indel_realigner/0.0.7
2044 783 2014-02-10 15:01:00 13964 toolshed.g2.bx.psu.edu/repos/iuc/gatk2/gatk2_print_reads/0.0.7 13959 toolshed.g2.bx.psu.edu/repos/iuc/gatk2/gatk2_base_recalibrator/0.0.7
2045 783 2014-02-10 15:01:00 13968 cshl_word_list_grep 13961 toolshed.g2.bx.psu.edu/repos/iuc/snpeff/snpSift_filter/3.4
2046 783 2014-02-10 15:01:00 13970 toolshed.g2.bx.psu.edu/repos/iuc/gatk2/gatk2_realigner_target_creator/0.0.7 13962 toolshed.g2.bx.psu.edu/repos/iuc/gatk2/gatk2_print_reads/0.0.7
2047 783 2014-02-10 15:01:00 13973 toolshed.g2.bx.psu.edu/repos/iuc/gatk2/gatk2_indel_realigner/0.0.7 13962 toolshed.g2.bx.psu.edu/repos/iuc/gatk2/gatk2_print_reads/0.0.7
2048 783 2014-02-10 15:01:00 13971 toolshed.g2.bx.psu.edu/repos/iuc/gatk2/gatk2_realigner_target_creator/0.0.7 13962 toolshed.g2.bx.psu.edu/repos/iuc/gatk2/gatk2_print_reads/0.0.7
2049 783 2014-02-10 15:01:00 13972 toolshed.g2.bx.psu.edu/repos/iuc/gatk2/gatk2_realigner_target_creator/0.0.7 13962 toolshed.g2.bx.psu.edu/repos/iuc/gatk2/gatk2_print_reads/0.0.7
2050 783 2014-02-10 15:01:00 13973 toolshed.g2.bx.psu.edu/repos/iuc/gatk2/gatk2_indel_realigner/0.0.7 13970 toolshed.g2.bx.psu.edu/repos/iuc/gatk2/gatk2_realigner_target_creator/0.0.7
2051 783 2014-02-10 15:01:00 13974 toolshed.g2.bx.psu.edu/repos/iuc/gatk2/gatk2_base_recalibrator/0.0.7 13973 toolshed.g2.bx.psu.edu/repos/iuc/gatk2/gatk2_indel_realigner/0.0.7
2052 785 2014-02-11 08:40:00 14019 fastqc 0.52 14011
2053 785 2014-02-11 08:40:00 14023 bowtie2 0.2 14012
2054 785 2014-02-11 08:40:00 14023 bowtie2 0.2 14013
2055 785 2014-02-11 08:40:00 14022 fastqc 0.52 14013
2056 785 2014-02-11 08:40:00 14025 fastqc 0.52 14015
2057 785 2014-02-11 08:40:00 14027 fastqc 0.52 14016
2058 785 2014-02-11 08:40:00 14029 bowtie2 0.2 14016
2059 785 2014-02-11 08:40:00 14029 bowtie2 0.2 14017
2060 785 2014-02-11 08:40:00 14032 toolshed.g2.bx.psu.edu/repos/devteam/samtools_rmdup/samtools_rmdup/1.0.0 1.0.0 14023 bowtie2 0.2
2061 785 2014-02-11 08:40:00 14033 toolshed.g2.bx.psu.edu/repos/devteam/samtools_flagstat/samtools_flagstat/1.0.0 1.0.0 14023 bowtie2 0.2
2062 785 2014-02-11 08:40:00 14035 toolshed.g2.bx.psu.edu/repos/devteam/samtools_flagstat/samtools_flagstat/1.0.0 1.0.0 14026 bowtie2 0.2
2063 785 2014-02-11 08:40:00 14036 toolshed.g2.bx.psu.edu/repos/devteam/samtools_rmdup/samtools_rmdup/1.0.0 1.0.0 14029 bowtie2 0.2
2064 785 2014-02-11 08:40:00 14038 toolshed.g2.bx.psu.edu/repos/devteam/samtools_flagstat/samtools_flagstat/1.0.0 1.0.0 14030 toolshed.g2.bx.psu.edu/repos/devteam/samtools_rmdup/samtools_rmdup/1.0.0 1.0.0
2065 785 2014-02-11 08:40:00 14043 toolshed.g2.bx.psu.edu/repos/ziru-zhou/macs2/modencode_peakcalling_macs2/2.0.10.2 2.0.10.2 14034 toolshed.g2.bx.psu.edu/repos/devteam/samtools_rmdup/samtools_rmdup/1.0.0 1.0.0
2066 785 2014-02-11 08:40:00 14043 toolshed.g2.bx.psu.edu/repos/ziru-zhou/macs2/modencode_peakcalling_macs2/2.0.10.2 2.0.10.2 14036 toolshed.g2.bx.psu.edu/repos/devteam/samtools_rmdup/samtools_rmdup/1.0.0 1.0.0
2067 793 2014-02-12 22:15:00 14059 openms_id_mapper 0.1.0 14057 openms_id_file_converter 0.1.0
2068 793 2014-02-12 22:15:00 14059 openms_id_mapper 0.1.0 14058 silac_analyzer 0.1.0
2069 795 2014-02-17 10:47:00 14071 toolshed.g2.bx.psu.edu/repos/devteam/samtools_rmdup/samtools_rmdup/1.0.0 1.0.0 14069 toolshed.g2.bx.psu.edu/repos/devteam/bowtie2/bowtie2/0.2 0.2
2070 795 2014-02-17 10:47:00 14068 toolshed.g2.bx.psu.edu/repos/iuc/gatk2/gatk2_print_reads/0.0.7 0.0.7 14072 toolshed.g2.bx.psu.edu/repos/iuc/gatk2/gatk2_base_recalibrator/0.0.7 0.0.7
2071 795 2014-02-17 10:47:00 14068 toolshed.g2.bx.psu.edu/repos/iuc/gatk2/gatk2_print_reads/0.0.7 0.0.7 14073 toolshed.g2.bx.psu.edu/repos/iuc/gatk2/gatk2_indel_realigner/0.0.7 0.0.7
2072 795 2014-02-17 10:47:00 14072 toolshed.g2.bx.psu.edu/repos/iuc/gatk2/gatk2_base_recalibrator/0.0.7 0.0.7 14073 toolshed.g2.bx.psu.edu/repos/iuc/gatk2/gatk2_indel_realigner/0.0.7 0.0.7
2073 795 2014-02-17 10:47:00 14069 toolshed.g2.bx.psu.edu/repos/devteam/bowtie2/bowtie2/0.2 0.2 14074
2074 795 2014-02-17 10:47:00 14069 toolshed.g2.bx.psu.edu/repos/devteam/bowtie2/bowtie2/0.2 0.2 14075
2075 795 2014-02-17 10:47:00 14072 toolshed.g2.bx.psu.edu/repos/iuc/gatk2/gatk2_base_recalibrator/0.0.7 0.0.7 14076
2076 795 2014-02-17 10:47:00 14072 toolshed.g2.bx.psu.edu/repos/iuc/gatk2/gatk2_base_recalibrator/0.0.7 0.0.7 14077
2077 795 2014-02-17 10:47:00 14072 toolshed.g2.bx.psu.edu/repos/iuc/gatk2/gatk2_base_recalibrator/0.0.7 0.0.7 14078
2078 796 2014-02-17 19:35:00 14089 bowtie2 14079
2079 796 2014-02-17 19:35:00 14088 fastqc 14080
2080 796 2014-02-17 19:35:00 14089 bowtie2 14080
2081 796 2014-02-17 19:35:00 14091 fastqc 14082
2082 796 2014-02-17 19:35:00 14093 fastqc 14083
2083 796 2014-02-17 19:35:00 14095 bowtie2 14083
2084 796 2014-02-17 19:35:00 14094 fastqc 14084
2085 796 2014-02-17 19:35:00 14095 bowtie2 14084
2086 796 2014-02-17 19:35:00 14096 fastqc 14085
2087 796 2014-02-17 19:35:00 14097 fastqc 14086
2088 796 2014-02-17 19:35:00 14100 toolshed.g2.bx.psu.edu/repos/devteam/samtools_flagstat/samtools_flagstat/1.0.0 14089 bowtie2
2089 796 2014-02-17 19:35:00 14102 toolshed.g2.bx.psu.edu/repos/devteam/samtools_flagstat/samtools_flagstat/1.0.0 14092 bowtie2
2090 796 2014-02-17 19:35:00 14103 toolshed.g2.bx.psu.edu/repos/devteam/samtools_rmdup/samtools_rmdup/1.0.0 14095 bowtie2
2091 796 2014-02-17 19:35:00 14104 toolshed.g2.bx.psu.edu/repos/devteam/samtools_flagstat/samtools_flagstat/1.0.0 14095 bowtie2
2092 796 2014-02-17 19:35:00 14106 toolshed.g2.bx.psu.edu/repos/devteam/samtools_flagstat/samtools_flagstat/1.0.0 14098 bowtie2
2093 796 2014-02-17 19:35:00 14107 toolshed.g2.bx.psu.edu/repos/devteam/samtools_flagstat/samtools_flagstat/1.0.0 14099 toolshed.g2.bx.psu.edu/repos/devteam/samtools_rmdup/samtools_rmdup/1.0.0
2094 796 2014-02-17 19:35:00 14109 toolshed.g2.bx.psu.edu/repos/ziru-zhou/macs2/modencode_peakcalling_macs2/2.0.10.2 14099 toolshed.g2.bx.psu.edu/repos/devteam/samtools_rmdup/samtools_rmdup/1.0.0
2095 796 2014-02-17 19:35:00 14108 toolshed.g2.bx.psu.edu/repos/devteam/samtools_flagstat/samtools_flagstat/1.0.0 14101 toolshed.g2.bx.psu.edu/repos/devteam/samtools_rmdup/samtools_rmdup/1.0.0
2096 796 2014-02-17 19:35:00 14109 toolshed.g2.bx.psu.edu/repos/ziru-zhou/macs2/modencode_peakcalling_macs2/2.0.10.2 14101 toolshed.g2.bx.psu.edu/repos/devteam/samtools_rmdup/samtools_rmdup/1.0.0
2097 796 2014-02-17 19:35:00 14110 toolshed.g2.bx.psu.edu/repos/devteam/samtools_flagstat/samtools_flagstat/1.0.0 14103 toolshed.g2.bx.psu.edu/repos/devteam/samtools_rmdup/samtools_rmdup/1.0.0
2098 797 2014-02-18 07:45:00 14120 openms_id_file_converter 0.1.0 14115
2099 797 2014-02-18 07:45:00 14121 openms_id_mapper 0.1.0 14118 openms_id_file_converter 0.1.0
2100 797 2014-02-18 07:45:00 14121 openms_id_mapper 0.1.0 14119 silac_analyzer 0.1.0
2101 797 2014-02-18 07:45:00 14122 openms_protein_quantifier 0.1.0 14120 openms_id_file_converter 0.1.0
2102 797 2014-02-18 07:45:00 14122 openms_protein_quantifier 0.1.0 14121 openms_id_mapper 0.1.0
2103 804 2014-02-19 15:18:00 14140 rmcontamination 0.1 14139
2104 804 2014-02-19 15:18:00 14143 eukaryotic_ncbi_submission 0.1.2 14141 scaffold2fasta 0.1
2105 804 2014-02-19 15:18:00 14143 eukaryotic_ncbi_submission 0.1.2 14141 scaffold2fasta 0.1
2106 804 2014-02-19 15:18:00 14142 eukaryotic_ncbi_submission 0.1.2 14141 scaffold2fasta 0.1
2107 804 2014-02-19 15:18:00 14142 eukaryotic_ncbi_submission 0.1.2 14141 scaffold2fasta 0.1
2108 804 2014-02-19 15:18:00 14146 antismash 2.0.2.1 14143 eukaryotic_ncbi_submission 0.1.2
2109 806 2014-02-19 15:23:00 14150 bismark_bowtie2 0.7.12 14148
2110 806 2014-02-19 15:23:00 14151 bamCoverage_deepTools 1 14149 toolshed.g2.bx.psu.edu/repos/devteam/bowtie2/bowtie2/0.2 0.2
2111 812 2014-03-10 12:55:00 14183 toolshed.g2.bx.psu.edu/repos/galaxyp/msconvert/msconvert3_raw/0.2.1 0.2.1 14181
2112 812 2014-03-10 12:55:00 14186 proteomics_search_tandem_1 1.0.1 14182
2113 812 2014-03-10 12:55:00 14186 proteomics_search_tandem_1 1.0.1 14184 toolshed.g2.bx.psu.edu/repos/galaxyp/msconvert/msconvert3_raw/0.2.1 0.2.1
2114 812 2014-03-10 12:55:00 14188 openms_id_file_converter 0.1.0 14187 toolshed.g2.bx.psu.edu/repos/iracooke/tpp_prophets/proteomics_search_peptide_prophet_1/1.0.1 1.0.1
2115 812 2014-03-10 12:55:00 14189 toolshed.g2.bx.psu.edu/repos/iracooke/tpp_prophets/proteomics_search_protein_prophet_1/1.0.1 1.0.1 14187 toolshed.g2.bx.psu.edu/repos/iracooke/tpp_prophets/proteomics_search_peptide_prophet_1/1.0.1 1.0.1
2116 813 2014-02-28 08:53:00 14194 Convert characters1 14193
2117 813 2014-02-28 08:53:00 14195 join1 14194 Convert characters1
2118 813 2014-02-28 08:53:00 14197 toolshed.g2.bx.psu.edu/repos/devteam/merge_cols/mergeCols1/1.0.1 14196 toolshed.g2.bx.psu.edu/repos/devteam/add_value/addValue/1.0.0
2119 815 2014-02-28 08:57:00 14211 toolshed.g2.bx.psu.edu/repos/devteam/merge_cols/mergeCols1/1.0.1 1.0.1 14210 toolshed.g2.bx.psu.edu/repos/devteam/add_value/addValue/1.0.0 1.0.0
2120 816 2014-02-28 12:05:00 14217 toolshed.g2.bx.psu.edu/repos/devteam/samtools_flagstat/samtools_flagstat/1.0.0 1.0.0 14213 toolshed.g2.bx.psu.edu/repos/devteam/samtools_rmdup/samtools_rmdup/1.0.0 1.0.0
2121 816 2014-02-28 12:05:00 14216 bamCoverage_deepTools 1 14213 toolshed.g2.bx.psu.edu/repos/devteam/samtools_rmdup/samtools_rmdup/1.0.0 1.0.0
2122 820 2014-02-28 15:58:00 14246 toolshed.g2.bx.psu.edu/repos/aaronquinlan/bedtools/bedtools_coveragebed_counts/0.1.0 0.1.0 14244
2123 820 2014-02-28 15:58:00 14246 toolshed.g2.bx.psu.edu/repos/aaronquinlan/bedtools/bedtools_coveragebed_counts/0.1.0 0.1.0 14245
2124 820 2014-02-28 15:58:00 14250 join1 2.0.2 14246 toolshed.g2.bx.psu.edu/repos/aaronquinlan/bedtools/bedtools_coveragebed_counts/0.1.0 0.1.0
2125 820 2014-02-28 15:58:00 14249 Grouping1 2.0.0 14248 Add_a_column1 1.1.0
2126 820 2014-02-28 15:58:00 14250 join1 2.0.2 14249 Grouping1 2.0.0
2127 820 2014-02-28 15:58:00 14254 Grouping1 2.0.0 14251 Add_a_column1 1.1.0
2128 824 2014-03-02 20:08:00 14280 Add_a_column1 1.1.0 14279 toolshed.g2.bx.psu.edu/repos/aaronquinlan/bedtools/bedtools_coveragebed_counts/0.1.0 0.1.0
2129 824 2014-03-02 20:08:00 14281 Add_a_column1 1.1.0 14280 Add_a_column1 1.1.0
2130 828 2014-03-03 11:52:00 14324 toolshed.g2.bx.psu.edu/repos/iuc/gatk2/gatk2_indel_realigner/0.0.7 0.0.7 14321 toolshed.g2.bx.psu.edu/repos/iuc/gatk2/gatk2_realigner_target_creator/0.0.7 0.0.7
2131 828 2014-03-03 11:52:00 14324 toolshed.g2.bx.psu.edu/repos/iuc/gatk2/gatk2_indel_realigner/0.0.7 0.0.7 14322 toolshed.g2.bx.psu.edu/repos/devteam/samtools_rmdup/samtools_rmdup/1.0.0 1.0.0
2132 828 2014-03-03 11:52:00 14319 toolshed.g2.bx.psu.edu/repos/iuc/gatk2/gatk2_print_reads/0.0.7 0.0.7 14323 toolshed.g2.bx.psu.edu/repos/iuc/gatk2/gatk2_base_recalibrator/0.0.7 0.0.7
2133 828 2014-03-03 11:52:00 14319 toolshed.g2.bx.psu.edu/repos/iuc/gatk2/gatk2_print_reads/0.0.7 0.0.7 14324 toolshed.g2.bx.psu.edu/repos/iuc/gatk2/gatk2_indel_realigner/0.0.7 0.0.7
2134 828 2014-03-03 11:52:00 14320 toolshed.g2.bx.psu.edu/repos/devteam/bowtie2/bowtie2/0.2 0.2 14326
2135 828 2014-03-03 11:52:00 14320 toolshed.g2.bx.psu.edu/repos/devteam/bowtie2/bowtie2/0.2 0.2 14327
2136 828 2014-03-03 11:52:00 14324 toolshed.g2.bx.psu.edu/repos/iuc/gatk2/gatk2_indel_realigner/0.0.7 0.0.7 14328
2137 828 2014-03-03 11:52:00 14324 toolshed.g2.bx.psu.edu/repos/iuc/gatk2/gatk2_indel_realigner/0.0.7 0.0.7 14329
2138 829 2014-03-03 14:04:00 14352 cshl_word_list_grep 14330
2139 829 2014-03-03 14:04:00 14355 cshl_word_list_grep 14330
2140 829 2014-03-03 14:04:00 14335 toolshed.g2.bx.psu.edu/repos/aaronquinlan/bedtools/bedtools_coveragebed_counts/0.1.0 14331
2141 829 2014-03-03 14:04:00 14336 Filter1 14334 Filter1
2142 829 2014-03-03 14:04:00 14341 Filter1 14334 Filter1
2143 829 2014-03-03 14:04:00 14343 Cut1 14336 Filter1
2144 829 2014-03-03 14:04:00 14345 Cut1 14338 Filter1
2145 829 2014-03-03 14:04:00 14347 Cut1 14340 Filter1
2146 829 2014-03-03 14:04:00 14348 Cut1 14341 Filter1
2147 829 2014-03-03 14:04:00 14352 cshl_word_list_grep 14345 Cut1
2148 829 2014-03-03 14:04:00 14355 cshl_word_list_grep 14348 Cut1
2149 829 2014-03-03 14:04:00 14359 join1 14349 Add_a_column1
2150 829 2014-03-03 14:04:00 14356 toolshed.g2.bx.psu.edu/repos/aaronquinlan/bedtools/bedtools_coveragebed_counts/0.1.0 14350 cshl_word_list_grep
2151 829 2014-03-03 14:04:00 14358 Add_a_column1 14357 Add_a_column1
2152 829 2014-03-03 14:04:00 14359 join1 14358 Add_a_column1
2153 829 2014-03-03 14:04:00 14360 Add_a_column1 14359 join1
2154 829 2014-03-03 14:04:00 14361 Grouping1 14360 Add_a_column1
2155 829 2014-03-03 14:04:00 14364 Paste1 14361 Grouping1
2156 829 2014-03-03 14:04:00 14364 Paste1 14362 Grouping1
2157 829 2014-03-03 14:04:00 14366 Cut1 14365 Paste1
2158 834 2014-03-03 14:52:00 14429 Grouping1 2.0.0 14430 Add_a_column1 1.1.0
2159 834 2014-03-03 14:52:00 14434 Add_a_column1 1.1.0 14432 Add_a_column1 1.1.0
2160 834 2014-03-03 14:52:00 14435 Add_a_column1 1.1.0 14433 toolshed.g2.bx.psu.edu/repos/aaronquinlan/bedtools/bedtools_coveragebed_counts/0.1.0 0.1.0
2161 834 2014-03-03 14:52:00 14437 Add_a_column1 1.1.0 14435 Add_a_column1 1.1.0
2162 866 2014-03-09 18:14:00 14967 Cut1 1.0.2 14965 toolshed.g2.bx.psu.edu/repos/devteam/ncbi_blast_plus/ncbi_tblastn_wrapper/0.0.20 0.0.20
2163 866 2014-03-09 18:14:00 14969 Add_a_column1 1.1.0 14967 Cut1 1.0.2
2164 866 2014-03-09 18:14:00 14970 Add_a_column1 1.1.0 14968 Cut1 1.0.2
2165 866 2014-03-09 18:14:00 14971 Add_a_column1 1.1.0 14969 Add_a_column1 1.1.0
2166 866 2014-03-09 18:14:00 14959 Add_a_column1 1.1.0 14971 Add_a_column1 1.1.0
2167 866 2014-03-09 18:14:00 14965 toolshed.g2.bx.psu.edu/repos/devteam/ncbi_blast_plus/ncbi_tblastn_wrapper/0.0.20 0.0.20 14973
2168 866 2014-03-09 18:14:00 14966 toolshed.g2.bx.psu.edu/repos/devteam/ncbi_blast_plus/ncbi_tblastn_wrapper/0.0.20 0.0.20 14974
2169 868 2014-03-09 20:22:00 14996 toolshed.g2.bx.psu.edu/repos/iuc/gatk2/gatk2_print_reads/0.0.7 0.0.7 14993 toolshed.g2.bx.psu.edu/repos/iuc/gatk2/gatk2_base_recalibrator/0.0.7 0.0.7
2170 868 2014-03-09 20:22:00 14996 toolshed.g2.bx.psu.edu/repos/iuc/gatk2/gatk2_print_reads/0.0.7 0.0.7 14994 toolshed.g2.bx.psu.edu/repos/iuc/gatk2/gatk2_indel_realigner/0.0.7 0.0.7
2171 868 2014-03-09 20:22:00 14997 toolshed.g2.bx.psu.edu/repos/iuc/gatk2/gatk2_haplotype_caller/0.0.7 0.0.7 14995 toolshed.g2.bx.psu.edu/repos/iuc/gatk2/gatk2_reduce_reads/0.0.7 0.0.7
2172 868 2014-03-09 20:22:00 14992 toolshed.g2.bx.psu.edu/repos/devteam/picard/picard_ReorderSam/1.56.0 1.56.0 14998 toolshed.g2.bx.psu.edu/repos/devteam/picard/rgPicardMarkDups/1.56.0 1.56.0
2173 868 2014-03-09 20:22:00 14998 toolshed.g2.bx.psu.edu/repos/devteam/picard/rgPicardMarkDups/1.56.0 1.56.0 14999 toolshed.g2.bx.psu.edu/repos/devteam/bowtie2/bowtie2/0.2 0.2
2174 868 2014-03-09 20:22:00 14997 toolshed.g2.bx.psu.edu/repos/iuc/gatk2/gatk2_haplotype_caller/0.0.7 0.0.7 15002
2175 869 2014-03-10 12:53:00 15006 toolshed.g2.bx.psu.edu/repos/galaxyp/msconvert/msconvert3/0.2.1 0.2.1 15005
2176 872 2014-03-10 13:17:00 15038 toolshed.g2.bx.psu.edu/repos/iuc/gatk2/gatk2_haplotype_caller/0.0.7 0.0.7 15035 toolshed.g2.bx.psu.edu/repos/iuc/gatk2/gatk2_reduce_reads/0.0.7 0.0.7
2177 872 2014-03-10 13:17:00 15032 toolshed.g2.bx.psu.edu/repos/devteam/picard/picard_ReorderSam/1.56.0 1.56.0 15042 toolshed.g2.bx.psu.edu/repos/devteam/picard/rgPicardMarkDups/1.56.0 1.56.0
2178 872 2014-03-10 13:17:00 15042 toolshed.g2.bx.psu.edu/repos/devteam/picard/rgPicardMarkDups/1.56.0 1.56.0 15043 toolshed.g2.bx.psu.edu/repos/devteam/bowtie2/bowtie2/0.2 0.2
2179 872 2014-03-10 13:17:00 15038 toolshed.g2.bx.psu.edu/repos/iuc/gatk2/gatk2_haplotype_caller/0.0.7 0.0.7 15046
2180 872 2014-03-10 13:17:00 15043 toolshed.g2.bx.psu.edu/repos/devteam/bowtie2/bowtie2/0.2 0.2 15050
2181 872 2014-03-10 13:17:00 15043 toolshed.g2.bx.psu.edu/repos/devteam/bowtie2/bowtie2/0.2 0.2 15051
2182 879 2014-03-11 19:51:00 15121 toolshed.g2.bx.psu.edu/repos/devteam/vcftools_merge/vcftools_merge/0.1 0.1 15128
2183 879 2014-03-11 19:51:00 15121 toolshed.g2.bx.psu.edu/repos/devteam/vcftools_merge/vcftools_merge/0.1 0.1 15129
2184 879 2014-03-11 19:51:00 15127 toolshed.g2.bx.psu.edu/repos/devteam/vcftools_merge/vcftools_merge/0.1 0.1 15133
2185 879 2014-03-11 19:51:00 15127 toolshed.g2.bx.psu.edu/repos/devteam/vcftools_merge/vcftools_merge/0.1 0.1 15134
2186 887 2014-03-14 14:28:00 15220 toolshed.g2.bx.psu.edu/repos/devteam/fastqc/fastqc/0.52 15212
2187 887 2014-03-14 14:28:00 15221 toolshed.g2.bx.psu.edu/repos/devteam/fastqc/fastqc/0.52 15213
2188 887 2014-03-14 14:28:00 15223 toolshed.g2.bx.psu.edu/repos/devteam/fastqc/fastqc/0.52 15214
2189 887 2014-03-14 14:28:00 15225 toolshed.g2.bx.psu.edu/repos/devteam/bowtie2/bowtie2/0.2 15214
2190 887 2014-03-14 14:28:00 15224 toolshed.g2.bx.psu.edu/repos/devteam/fastqc/fastqc/0.52 15215
2191 887 2014-03-14 14:28:00 15225 toolshed.g2.bx.psu.edu/repos/devteam/bowtie2/bowtie2/0.2 15215
2192 887 2014-03-14 14:28:00 15227 toolshed.g2.bx.psu.edu/repos/devteam/fastqc/fastqc/0.52 15217
2193 887 2014-03-14 14:28:00 15236 toolshed.g2.bx.psu.edu/repos/ziru-zhou/macs2/modencode_peakcalling_macs2/2.0.10.2 15232 toolshed.g2.bx.psu.edu/repos/devteam/samtools_rmdup/samtools_rmdup/1.0.0
2194 887 2014-03-14 14:28:00 15236 toolshed.g2.bx.psu.edu/repos/ziru-zhou/macs2/modencode_peakcalling_macs2/2.0.10.2 15233 toolshed.g2.bx.psu.edu/repos/devteam/samtools_rmdup/samtools_rmdup/1.0.0
2195 887 2014-03-14 14:28:00 15237 toolshed.g2.bx.psu.edu/repos/ziru-zhou/macs2/modencode_peakcalling_macs2/2.0.10.2 15234 toolshed.g2.bx.psu.edu/repos/devteam/samtools_rmdup/samtools_rmdup/1.0.0
2196 887 2014-03-14 14:28:00 15237 toolshed.g2.bx.psu.edu/repos/ziru-zhou/macs2/modencode_peakcalling_macs2/2.0.10.2 15235 toolshed.g2.bx.psu.edu/repos/devteam/samtools_rmdup/samtools_rmdup/1.0.0
2197 892 2014-03-14 15:14:00 15263 toolshed.g2.bx.psu.edu/repos/devteam/emboss_5/EMBOSS: shuffleseq87/5.0.0 5.0.0 15262
2198 892 2014-03-14 15:14:00 15265 toolshed.g2.bx.psu.edu/repos/devteam/add_value/addValue/1.0.0 1.0.0 15264 fasta2tab 1.1.0
2199 893 2014-03-14 20:04:00 15268 toolshed.g2.bx.psu.edu/repos/iuc/snpeff/snpEff/3.4 3.4 15269 toolshed.g2.bx.psu.edu/repos/devteam/vcftools_isec/vcftools_isec/0.1 0.1
2200 893 2014-03-14 20:04:00 15272 toolshed.g2.bx.psu.edu/repos/devteam/vcftools_merge/vcftools_merge/0.1 0.1 15276
2201 893 2014-03-14 20:04:00 15272 toolshed.g2.bx.psu.edu/repos/devteam/vcftools_merge/vcftools_merge/0.1 0.1 15277
2202 893 2014-03-14 20:04:00 15274 toolshed.g2.bx.psu.edu/repos/devteam/vcftools_merge/vcftools_merge/0.1 0.1 15280
2203 893 2014-03-14 20:04:00 15274 toolshed.g2.bx.psu.edu/repos/devteam/vcftools_merge/vcftools_merge/0.1 0.1 15281
2204 897 2014-03-16 20:33:00 15316 toolshed.g2.bx.psu.edu/repos/devteam/fastqc/fastqc/0.52 15308
2205 897 2014-03-16 20:33:00 15319 toolshed.g2.bx.psu.edu/repos/devteam/bowtie2/bowtie2/0.2 15308
2206 897 2014-03-16 20:33:00 15321 toolshed.g2.bx.psu.edu/repos/devteam/bowtie2/bowtie2/0.2 15308
2207 897 2014-03-16 20:33:00 15318 toolshed.g2.bx.psu.edu/repos/devteam/fastqc/fastqc/0.52 15309
2208 897 2014-03-16 20:33:00 15319 toolshed.g2.bx.psu.edu/repos/devteam/bowtie2/bowtie2/0.2 15309
2209 897 2014-03-16 20:33:00 15321 toolshed.g2.bx.psu.edu/repos/devteam/bowtie2/bowtie2/0.2 15309
2210 897 2014-03-16 20:33:00 15322 toolshed.g2.bx.psu.edu/repos/devteam/fastqc/fastqc/0.52 15310
2211 897 2014-03-16 20:33:00 15327 toolshed.g2.bx.psu.edu/repos/devteam/bowtie2/bowtie2/0.2 15310
2212 897 2014-03-16 20:33:00 15324 toolshed.g2.bx.psu.edu/repos/devteam/fastqc/fastqc/0.52 15311
2213 897 2014-03-16 20:33:00 15327 toolshed.g2.bx.psu.edu/repos/devteam/bowtie2/bowtie2/0.2 15311
2214 897 2014-03-16 20:33:00 15331 toolshed.g2.bx.psu.edu/repos/devteam/bowtie2/bowtie2/0.2 15312
2215 897 2014-03-16 20:33:00 15329 toolshed.g2.bx.psu.edu/repos/devteam/fastqc/fastqc/0.52 15312
2216 897 2014-03-16 20:33:00 15333 toolshed.g2.bx.psu.edu/repos/devteam/bowtie2/bowtie2/0.2 15312
2217 897 2014-03-16 20:33:00 15330 toolshed.g2.bx.psu.edu/repos/devteam/fastqc/fastqc/0.52 15313
2218 897 2014-03-16 20:33:00 15331 toolshed.g2.bx.psu.edu/repos/devteam/bowtie2/bowtie2/0.2 15313
2219 897 2014-03-16 20:33:00 15332 toolshed.g2.bx.psu.edu/repos/devteam/fastqc/fastqc/0.52 15313
2220 897 2014-03-16 20:33:00 15333 toolshed.g2.bx.psu.edu/repos/devteam/bowtie2/bowtie2/0.2 15313
2221 897 2014-03-16 20:33:00 15339 toolshed.g2.bx.psu.edu/repos/devteam/bowtie2/bowtie2/0.2 15314
2222 897 2014-03-16 20:33:00 15336 toolshed.g2.bx.psu.edu/repos/devteam/fastqc/fastqc/0.52 15315
2223 897 2014-03-16 20:33:00 15338 toolshed.g2.bx.psu.edu/repos/devteam/fastqc/fastqc/0.52 15315
2224 897 2014-03-16 20:33:00 15339 toolshed.g2.bx.psu.edu/repos/devteam/bowtie2/bowtie2/0.2 15315
2225 897 2014-03-16 20:33:00 15342 toolshed.g2.bx.psu.edu/repos/devteam/samtools_rmdup/samtools_rmdup/1.0.0 15325 toolshed.g2.bx.psu.edu/repos/devteam/bowtie2/bowtie2/0.2
2226 897 2014-03-16 20:33:00 15345 toolshed.g2.bx.psu.edu/repos/devteam/samtools_rmdup/samtools_rmdup/1.0.0 15333 toolshed.g2.bx.psu.edu/repos/devteam/bowtie2/bowtie2/0.2
2227 897 2014-03-16 20:33:00 15347 toolshed.g2.bx.psu.edu/repos/devteam/samtools_rmdup/samtools_rmdup/1.0.0 15339 toolshed.g2.bx.psu.edu/repos/devteam/bowtie2/bowtie2/0.2
2228 897 2014-03-16 20:33:00 15348 toolshed.g2.bx.psu.edu/repos/ziru-zhou/macs2/modencode_peakcalling_macs2/2.0.10.2 15340 toolshed.g2.bx.psu.edu/repos/devteam/samtools_rmdup/samtools_rmdup/1.0.0
2229 897 2014-03-16 20:33:00 15348 toolshed.g2.bx.psu.edu/repos/ziru-zhou/macs2/modencode_peakcalling_macs2/2.0.10.2 15342 toolshed.g2.bx.psu.edu/repos/devteam/samtools_rmdup/samtools_rmdup/1.0.0
2230 897 2014-03-16 20:33:00 15350 toolshed.g2.bx.psu.edu/repos/ziru-zhou/macs2/modencode_peakcalling_macs2/2.0.10.2 15344 toolshed.g2.bx.psu.edu/repos/devteam/samtools_rmdup/samtools_rmdup/1.0.0
2231 897 2014-03-16 20:33:00 15351 toolshed.g2.bx.psu.edu/repos/ziru-zhou/macs2/modencode_peakcalling_macs2/2.0.10.2 15345 toolshed.g2.bx.psu.edu/repos/devteam/samtools_rmdup/samtools_rmdup/1.0.0
2232 897 2014-03-16 20:33:00 15350 toolshed.g2.bx.psu.edu/repos/ziru-zhou/macs2/modencode_peakcalling_macs2/2.0.10.2 15346 toolshed.g2.bx.psu.edu/repos/devteam/samtools_rmdup/samtools_rmdup/1.0.0
2233 897 2014-03-16 20:33:00 15351 toolshed.g2.bx.psu.edu/repos/ziru-zhou/macs2/modencode_peakcalling_macs2/2.0.10.2 15347 toolshed.g2.bx.psu.edu/repos/devteam/samtools_rmdup/samtools_rmdup/1.0.0
2234 902 2014-03-17 13:28:00 15385 Remove beginning1 15380
2235 902 2014-03-17 13:28:00 15387 Filter1 15384 toolshed.g2.bx.psu.edu/repos/aaronquinlan/bedtools/bedtools_intersectbed_bam/0.1.0
2236 902 2014-03-17 13:28:00 15389 Grouping1 15387 Filter1
2237 906 2014-03-17 16:25:00 15411 proteomics_search_tandem_1 1.0.1 15408
2238 906 2014-03-17 16:25:00 15410 toolshed.g2.bx.psu.edu/repos/galaxyp/msconvert/msconvert3_raw/0.2.1 0.2.1 15409
2239 906 2014-03-17 16:25:00 15411 proteomics_search_tandem_1 1.0.1 15410 toolshed.g2.bx.psu.edu/repos/galaxyp/msconvert/msconvert3_raw/0.2.1 0.2.1
2240 906 2014-03-17 16:25:00 15412 toolshed.g2.bx.psu.edu/repos/iracooke/tpp_prophets/proteomics_search_peptide_prophet_1/1.0.1 1.0.1 15411 proteomics_search_tandem_1 1.0.1
2241 908 2014-03-17 16:28:00 15431 proteomics_search_tandem_1 1.0.1 15427
2242 908 2014-03-17 16:28:00 15430 silac_analyzer 0.1.0 15428 toolshed.g2.bx.psu.edu/repos/galaxyp/msconvert/msconvert3_raw/0.2.1 0.2.1
2243 908 2014-03-17 16:28:00 15431 proteomics_search_tandem_1 1.0.1 15429 toolshed.g2.bx.psu.edu/repos/galaxyp/msconvert/msconvert3_raw/0.2.1 0.2.1
2244 908 2014-03-17 16:28:00 15435 openms_id_mapper 0.1.0 15430 silac_analyzer 0.1.0
2245 908 2014-03-17 16:28:00 15435 openms_id_mapper 0.1.0 15433 openms_id_file_converter 0.1.0
2246 908 2014-03-17 16:28:00 15436 openms_id_file_converter 0.1.0 15434 toolshed.g2.bx.psu.edu/repos/iracooke/tpp_prophets/proteomics_search_protein_prophet_1/1.0.1 1.0.1
2247 908 2014-03-17 16:28:00 15437 openms_protein_quantifier 0.1.0 15435 openms_id_mapper 0.1.0
2248 908 2014-03-17 16:28:00 15437 openms_protein_quantifier 0.1.0 15436 openms_id_file_converter 0.1.0
2249 911 2014-03-18 12:19:00 15469 toolshed.g2.bx.psu.edu/repos/iuc/gatk2/gatk2_haplotype_caller/0.0.7 0.0.7 15467 toolshed.g2.bx.psu.edu/repos/iuc/gatk2/gatk2_reduce_reads/0.0.7 0.0.7
2250 911 2014-03-18 12:19:00 15468 toolshed.g2.bx.psu.edu/repos/iuc/gatk2/gatk2_variant_select/0.0.7 0.0.7 15469 toolshed.g2.bx.psu.edu/repos/iuc/gatk2/gatk2_haplotype_caller/0.0.7 0.0.7
2251 911 2014-03-18 12:19:00 15470 toolshed.g2.bx.psu.edu/repos/iuc/snpeff/snpEff/3.4 3.4 15471 toolshed.g2.bx.psu.edu/repos/iuc/gatk2/gatk2_variant_annotator/0.0.7 0.0.7
2252 911 2014-03-18 12:19:00 15469 toolshed.g2.bx.psu.edu/repos/iuc/gatk2/gatk2_haplotype_caller/0.0.7 0.0.7 15473
2253 914 2014-03-18 21:07:00 15512 fasta2tab 1.1.0 15508
2254 914 2014-03-18 21:07:00 15513 toolshed.g2.bx.psu.edu/repos/jjohnson/rsem/rsem_calculate_expression/1.1.17 15509
2255 914 2014-03-18 21:07:00 15513 toolshed.g2.bx.psu.edu/repos/jjohnson/rsem/rsem_calculate_expression/1.1.17 15510
2256 914 2014-03-18 21:07:00 15513 toolshed.g2.bx.psu.edu/repos/jjohnson/rsem/rsem_calculate_expression/1.1.17 15511 toolshed.g2.bx.psu.edu/repos/jjohnson/rsem/rsem_prepare_reference/1.1.17
2257 914 2014-03-18 21:07:00 15514 Cut1 1.0.2 15512 fasta2tab 1.1.0
2258 914 2014-03-18 21:07:00 15516 Convert characters1 1.0.0 15514 Cut1 1.0.2
2259 914 2014-03-18 21:07:00 15518 Cut1 1.0.2 15516 Convert characters1 1.0.0
2260 914 2014-03-18 21:07:00 15522 join1 2.0.2 15517 Add_a_column1 1.1.0
2261 914 2014-03-18 21:07:00 15520 Cut1 1.0.2 15519 Convert characters1 1.0.0
2262 914 2014-03-18 21:07:00 15522 join1 2.0.2 15521 Paste1 1.0.0
2263 914 2014-03-18 21:07:00 15524 addValue 1.0.0 15523 addValue 1.0.0
2264 914 2014-03-18 21:07:00 15525 mergeCols1 1.0.1 15524 addValue 1.0.0
2265 914 2014-03-18 21:07:00 15527 tab2fasta 1.1.0 15526 Cut1 1.0.2
2266 914 2014-03-18 21:07:00 15528 toolshed.g2.bx.psu.edu/repos/devteam/fasta_formatter/cshl_fasta_formatter/1.0.0 1.0.0 15527 tab2fasta 1.1.0
2267 915 2014-03-18 21:10:00 15532 Show beginning1 1.0.0 15529
2268 915 2014-03-18 21:10:00 15533 Show beginning1 1.0.0 15530
2269 915 2014-03-18 21:10:00 15537 Extract genomic DNA 1 2.2.3 15531
2270 915 2014-03-18 21:10:00 15537 Extract genomic DNA 1 2.2.3 15536 toolshed.g2.bx.psu.edu/repos/jjohnson/filter_bed_on_splice_junctions/filter_bed_on_splice_junctions/0.0.1
2271 915 2014-03-18 21:10:00 15538 toolshed.g2.bx.psu.edu/repos/jjohnson/translate_bed_sequences/translate_bed_sequences/0.0.1 15537 Extract genomic DNA 1 2.2.3
2272 924 2014-03-19 23:17:00 15625 toolshed.g2.bx.psu.edu/repos/iuc/gatk2/gatk2_variant_annotator/0.0.7 0.0.7 15622 toolshed.g2.bx.psu.edu/repos/iuc/gatk2/gatk2_variant_select/0.0.7 0.0.7
2273 924 2014-03-19 23:17:00 15627 toolshed.g2.bx.psu.edu/repos/iuc/gatk2/gatk2_realigner_target_creator/0.0.7 0.0.7 15626 toolshed.g2.bx.psu.edu/repos/devteam/picard/picard_ReorderSam/1.56.0 1.56.0
2274 924 2014-03-19 23:17:00 15632 toolshed.g2.bx.psu.edu/repos/iuc/gatk2/gatk2_print_reads/0.0.7 0.0.7 15629 toolshed.g2.bx.psu.edu/repos/iuc/gatk2/gatk2_base_recalibrator/0.0.7 0.0.7
2275 924 2014-03-19 23:17:00 15629 toolshed.g2.bx.psu.edu/repos/iuc/gatk2/gatk2_base_recalibrator/0.0.7 0.0.7 15630 toolshed.g2.bx.psu.edu/repos/iuc/gatk2/gatk2_indel_realigner/0.0.7 0.0.7
2276 924 2014-03-19 23:17:00 15632 toolshed.g2.bx.psu.edu/repos/iuc/gatk2/gatk2_print_reads/0.0.7 0.0.7 15630 toolshed.g2.bx.psu.edu/repos/iuc/gatk2/gatk2_indel_realigner/0.0.7 0.0.7
2277 924 2014-03-19 23:17:00 15631 toolshed.g2.bx.psu.edu/repos/iuc/gatk2/gatk2_reduce_reads/0.0.7 0.0.7 15632 toolshed.g2.bx.psu.edu/repos/iuc/gatk2/gatk2_print_reads/0.0.7 0.0.7
2278 924 2014-03-19 23:17:00 15625 toolshed.g2.bx.psu.edu/repos/iuc/gatk2/gatk2_variant_annotator/0.0.7 0.0.7 15633
2279 924 2014-03-19 23:17:00 15629 toolshed.g2.bx.psu.edu/repos/iuc/gatk2/gatk2_base_recalibrator/0.0.7 0.0.7 15633
2280 924 2014-03-19 23:17:00 15627 toolshed.g2.bx.psu.edu/repos/iuc/gatk2/gatk2_realigner_target_creator/0.0.7 0.0.7 15634
2281 924 2014-03-19 23:17:00 15629 toolshed.g2.bx.psu.edu/repos/iuc/gatk2/gatk2_base_recalibrator/0.0.7 0.0.7 15634
2282 924 2014-03-19 23:17:00 15627 toolshed.g2.bx.psu.edu/repos/iuc/gatk2/gatk2_realigner_target_creator/0.0.7 0.0.7 15635
2283 924 2014-03-19 23:17:00 15629 toolshed.g2.bx.psu.edu/repos/iuc/gatk2/gatk2_base_recalibrator/0.0.7 0.0.7 15635
2284 924 2014-03-19 23:17:00 15628 toolshed.g2.bx.psu.edu/repos/devteam/picard/rgPicardMarkDups/1.56.0 1.56.0 15636
2285 927 2014-03-22 09:47:00 15676 proteomics_search_tandem_1 1.0.1 15672
2286 3 2013-02-07 16:48:00 8 addValue 1.0.0 6 Cut1 1.0.1
2287 3 2013-02-07 16:48:00 6 Cut1 1.0.1 7 Remove beginning1 1.0.0
2288 3 2013-02-07 16:48:00 9 Cut1 1.0.1 7 Remove beginning1 1.0.0
2289 3 2013-02-07 16:48:00 11 Paste1 1.0.0 8 addValue 1.0.0
2290 3 2013-02-07 16:48:00 11 Paste1 1.0.0 9 Cut1 1.0.1
2291 3 2013-02-07 16:48:00 10 addValue 1.0.0 11 Paste1 1.0.0
2292 3 2013-02-07 16:48:00 5 Grep1 1.0.1 12
2293 4 2013-02-07 16:48:00 22 barchart_gnuplot 1.0.0 13 cat1 1.0.0
2294 4 2013-02-07 16:48:00 17 sort1 1.0.1 15 bedtools_intersectBed
2295 4 2013-02-07 16:48:00 19 cshl_awk_tool 17 sort1 1.0.1
2296 4 2013-02-07 16:48:00 15 bedtools_intersectBed 23
2297 4 2013-02-07 16:48:00 15 bedtools_intersectBed 24
2298 5 2013-02-07 16:49:00 67 barchart_gnuplot 1.0.0 26 cat1 1.0.0
2299 5 2013-02-07 16:49:00 65 Add_a_column1 1.1.0 35 Paste1 1.0.0
2300 5 2013-02-07 16:49:00 45 Summary_Statistics1 1.1.0 39 Filter1 1.1.0
2301 5 2013-02-07 16:49:00 46 Summary_Statistics1 1.1.0 39 Filter1 1.1.0
2302 5 2013-02-07 16:49:00 41 cshl_grep_tool 1.0.0 40 gops_coverage_1 1.0.0
2303 5 2013-02-07 16:49:00 42 Filter1 1.1.0 40 gops_coverage_1 1.0.0
2304 5 2013-02-07 16:49:00 43 Filter1 1.1.0 40 gops_coverage_1 1.0.0
2305 5 2013-02-07 16:49:00 44 Filter1 1.1.0 40 gops_coverage_1 1.0.0
2306 5 2013-02-07 16:49:00 56 Summary_Statistics1 1.1.0 43 Filter1 1.1.0
2307 5 2013-02-07 16:49:00 53 Summary_Statistics1 1.1.0 44 Filter1 1.1.0
2308 5 2013-02-07 16:49:00 58 Cut1 1.0.1 46 Summary_Statistics1 1.1.0
2309 5 2013-02-07 16:49:00 32 Cut1 1.0.1 49 Summary_Statistics1 1.1.0
2310 5 2013-02-07 16:49:00 25 addValue 1.0.0 61 Add_a_column1 1.1.0
2311 5 2013-02-07 16:49:00 48 addValue 1.0.0 65 Add_a_column1 1.1.0
2312 5 2013-02-07 16:49:00 61 Add_a_column1 1.1.0 66 Paste1 1.0.0
2313 9 2013-02-07 16:59:00 85 addValue 1.0.0 83 Cut1 1.0.1
2314 9 2013-02-07 16:59:00 83 Cut1 1.0.1 84 Remove beginning1 1.0.0
2315 9 2013-02-07 16:59:00 86 Cut1 1.0.1 84 Remove beginning1 1.0.0
2316 9 2013-02-07 16:59:00 87 addValue 1.0.0 88 Paste1 1.0.0
2317 11 2013-02-07 17:03:00 136 cat1 1.0.0 135 addValue 1.0.0
2318 11 2013-02-07 17:03:00 147 Paste1 1.0.0 141 Cut1 1.0.1
2319 11 2013-02-07 17:03:00 147 Paste1 1.0.0 142 Cut1 1.0.1
2320 11 2013-02-07 17:03:00 136 cat1 1.0.0 148 addValue 1.0.0
2321 11 2013-02-07 17:03:00 136 cat1 1.0.0 149 addValue 1.0.0
2322 11 2013-02-07 17:03:00 150 Filter1 1.1.0 151 gops_coverage_1 1.0.0
2323 11 2013-02-07 17:03:00 152 cshl_grep_tool 1.0.0 151 gops_coverage_1 1.0.0
2324 11 2013-02-07 17:03:00 153 Filter1 1.1.0 151 gops_coverage_1 1.0.0
2325 11 2013-02-07 17:03:00 154 Filter1 1.1.0 151 gops_coverage_1 1.0.0
2326 11 2013-02-07 17:03:00 166 Summary_Statistics1 1.1.0 154 Filter1 1.1.0
2327 11 2013-02-07 17:03:00 167 Summary_Statistics1 1.1.0 154 Filter1 1.1.0
2328 11 2013-02-07 17:03:00 164 Summary_Statistics1 1.1.0 155 Filter1 1.1.0
2329 11 2013-02-07 17:03:00 165 Summary_Statistics1 1.1.0 155 Filter1 1.1.0
2330 11 2013-02-07 17:03:00 169 Cut1 1.0.1 157 Summary_Statistics1 1.1.0
2331 11 2013-02-07 17:03:00 136 cat1 1.0.0 158 addValue 1.0.0
2332 11 2013-02-07 17:03:00 136 cat1 1.0.0 159 addValue 1.0.0
2333 11 2013-02-07 17:03:00 142 Cut1 1.0.1 160 Summary_Statistics1 1.1.0
2334 11 2013-02-07 17:03:00 143 Cut1 1.0.1 163 Summary_Statistics1 1.1.0
2335 11 2013-02-07 17:03:00 138 Cut1 1.0.1 164 Summary_Statistics1 1.1.0
2336 11 2013-02-07 17:03:00 140 Cut1 1.0.1 166 Summary_Statistics1 1.1.0
2337 11 2013-02-07 17:03:00 139 Cut1 1.0.1 167 Summary_Statistics1 1.1.0
2338 11 2013-02-07 17:03:00 135 addValue 1.0.0 172 Add_a_column1 1.1.0
2339 11 2013-02-07 17:03:00 159 addValue 1.0.0 176 Add_a_column1 1.1.0
2340 11 2013-02-07 17:03:00 172 Add_a_column1 1.1.0 177 Paste1 1.0.0
2341 11 2013-02-07 17:03:00 151 gops_coverage_1 1.0.0 178
2342 11 2013-02-07 17:03:00 151 gops_coverage_1 1.0.0 179
2343 12 2013-02-07 17:04:00 189 barchart_gnuplot 1.0.0 180 cat1 1.0.0
2344 12 2013-02-07 17:04:00 183 wc_gnu 1.0.0 181 bedtools_intersectBed
2345 12 2013-02-07 17:04:00 184 sort1 1.0.1 182 bedtools_intersectBed
2346 19 2013-02-14 15:51:00 205 gops_subtract_1 1.0.0 199
2347 19 2013-02-14 15:51:00 210 cshl_awk_tool 200 gops_intersect_1 1.0.0
2348 19 2013-02-14 15:51:00 215 Count1 1.0.0 200 gops_intersect_1 1.0.0
2349 19 2013-02-14 15:51:00 205 gops_subtract_1 1.0.0 201 cshl_find_and_replace 1.0.0
2350 19 2013-02-14 15:51:00 202 get_flanks1 1.0.0 203
2351 19 2013-02-14 15:51:00 204 cshl_grep_tool 1.0.0 203
2352 19 2013-02-14 15:51:00 206 cshl_awk_tool 205 gops_subtract_1 1.0.0
2353 19 2013-02-14 15:51:00 214 Show beginning1 1.0.0 207 Extract genomic DNA 1 2.2.2
2354 19 2013-02-14 15:51:00 211 Show beginning1 1.0.0 209 Extract genomic DNA 1 2.2.2
2355 19 2013-02-14 15:51:00 212 meme_meme 1.0.0 211 Show beginning1 1.0.0
2356 29 2013-02-14 17:12:00 246 toolshed.g2.bx.psu.edu/repos/ryo-tas/macs14/peakcalling_macs14/1.4.1 1.4.1 245
2357 29 2013-02-14 17:12:00 246 toolshed.g2.bx.psu.edu/repos/ryo-tas/macs14/peakcalling_macs14/1.4.1 1.4.1 247
2358 29 2013-02-14 17:12:00 252 gops_intersect_1 1.0.0 251
2359 29 2013-02-14 17:12:00 267 Count1 1.0.0 252 gops_intersect_1 1.0.0
2360 29 2013-02-14 17:12:00 252 gops_intersect_1 1.0.0 253 cshl_find_and_replace 1.0.0
2361 29 2013-02-14 17:12:00 253 cshl_find_and_replace 1.0.0 254 get_flanks1 1.0.0
2362 29 2013-02-14 17:12:00 258 cshl_awk_tool 257 gops_subtract_1 1.0.0
2363 29 2013-02-14 17:12:00 259 Extract genomic DNA 1 2.2.2 258 cshl_awk_tool
2364 29 2013-02-14 17:12:00 259 Extract genomic DNA 1 2.2.2 260
2365 29 2013-02-14 17:12:00 261 Extract genomic DNA 1 2.2.2 260
2366 29 2013-02-14 17:12:00 261 Extract genomic DNA 1 2.2.2 262 cshl_awk_tool
2367 29 2013-02-14 17:12:00 268 barchart_gnuplot 1.0.0 267 Count1 1.0.0
2368 31 2013-02-18 11:33:00 277 Cut1 1.0.1 276 mergeCols1 1.0.1
2369 33 2013-02-16 18:11:00 286 Count1 1.0.0 284 gops_intersect_1 1.0.0
2370 37 2013-02-18 11:33:00 295 cshl_sed_tool 1.0.0 294
2371 38 2013-02-18 15:28:00 297 Count1 296 gops_intersect_1
2372 62 2013-02-18 16:20:00 397 barchart_gnuplot 1.0.0 396 Count1 1.0.0
2373 64 2013-02-18 16:19:00 403 barchart_gnuplot 1.0.0 402 Count1 1.0.0
2374 66 2013-02-18 16:19:00 408 Count1 1.0.0 407
2375 66 2013-02-18 16:19:00 409 barchart_gnuplot 1.0.0 408 Count1 1.0.0
2376 72 2013-02-18 16:20:00 427 barchart_gnuplot 1.0.0 426 Count1 1.0.0
2377 74 2013-02-18 16:20:00 432 Count1 1.0.0 431
2378 74 2013-02-18 16:20:00 433 barchart_gnuplot 1.0.0 432 Count1 1.0.0
2379 75 2013-02-18 16:20:00 437 barchart_gnuplot 436 Count1
2380 76 2013-02-18 16:20:00 439 Count1 1.0.0 438
2381 80 2013-02-18 16:22:00 463 Count1 1.0.0 462
2382 80 2013-02-18 16:22:00 464 barchart_gnuplot 1.0.0 463 Count1 1.0.0
2383 81 2013-02-18 16:22:00 467 mergeCols1 1.0.1 466 addValue 1.0.0
2384 81 2013-02-18 16:22:00 469 cshl_find_and_replace 1.0.0 468 Cut1 1.0.1
2385 81 2013-02-18 16:22:00 470 cshl_find_and_replace 1.0.0 469 cshl_find_and_replace 1.0.0
2386 81 2013-02-18 16:22:00 473 Count1 1.0.0 472 gops_intersect_1 1.0.0
2387 82 2013-02-18 16:22:00 476 CONVERTER_interval_to_bedstrict_0 1.0.0 475
2388 82 2013-02-18 16:22:00 479 Cut1 1.0.1 478 mergeCols1 1.0.1
2389 82 2013-02-18 16:22:00 482 get_flanks1 1.0.0 481
2390 82 2013-02-18 16:22:00 487 Count1 1.0.0 483 gops_intersect_1 1.0.0
2391 82 2013-02-18 16:22:00 486 CONVERTER_interval_to_bedstrict_0 1.0.0 485 CONVERTER_interval_to_bed_0 1.0.0
2392 83 2013-02-18 19:10:00 490 gops_intersect_1 1.0.0 489
2393 83 2013-02-18 19:10:00 490 gops_intersect_1 1.0.0 491
2394 83 2013-02-18 19:10:00 493 barchart_gnuplot 1.0.0 492 Count1 1.0.0
2395 84 2013-02-19 12:02:00 496 Count1 495 gops_intersect_1
2396 84 2013-02-19 12:02:00 497 barchart_gnuplot 496 Count1
2397 86 2013-02-19 12:08:00 507 Count1 1.0.0 505 gops_intersect_1 1.0.0
2398 95 2013-02-20 10:03:00 674 Count1 1.0.0 672 gops_intersect_1 1.0.0
2399 95 2013-02-20 10:03:00 675 barchart_gnuplot 1.0.0 674 Count1 1.0.0
2400 97 2013-02-20 10:11:00 703 cshl_awk_tool 1.0.0 701 toolshed.g2.bx.psu.edu/repos/ryo-tas/macs14/peakcalling_macs14/1.4.1 1.4.1
2401 97 2013-02-20 10:11:00 704 gops_subtract_1 1.0.0 703 cshl_awk_tool 1.0.0
2402 97 2013-02-20 10:11:00 722 Count1 1.0.0 704 gops_subtract_1 1.0.0
2403 97 2013-02-20 10:11:00 704 gops_subtract_1 1.0.0 705 cshl_awk_tool 1.0.0
2404 97 2013-02-20 10:11:00 705 cshl_awk_tool 1.0.0 706 get_flanks1 1.0.0
2405 97 2013-02-20 10:11:00 709 Extract genomic DNA 1 2.2.2 708 gops_intersect_1 1.0.0
2406 97 2013-02-20 10:11:00 720 Count1 1.0.0 708 gops_intersect_1 1.0.0
2407 97 2013-02-20 10:11:00 716 fasta2tab 1.1.0 709 Extract genomic DNA 1 2.2.2
2408 97 2013-02-20 10:11:00 709 Extract genomic DNA 1 2.2.2 710
2409 97 2013-02-20 10:11:00 712 fasta2tab 1.1.0 711 Extract genomic DNA 1 2.2.2
2410 97 2013-02-20 10:11:00 713 Show beginning1 1.0.0 712 fasta2tab 1.1.0
2411 97 2013-02-20 10:11:00 719 meme_meme 1.0.0 718 tab2fasta 1.1.0
2412 97 2013-02-20 10:11:00 723 barchart_gnuplot 1.0.0 722 Count1 1.0.0
2413 98 2013-02-20 10:44:00 725 addValue 1.0.0 724
2414 98 2013-02-20 10:44:00 727 Cut1 1.0.1 726 mergeCols1 1.0.1
2415 101 2013-02-20 14:16:00 738 mergeCols1 1.0.1 737 addValue 1.0.0
2416 101 2013-02-20 14:16:00 739 Cut1 1.0.1 738 mergeCols1 1.0.1
2417 103 2013-02-20 15:32:00 754 gops_intersect_1 753
2418 103 2013-02-20 15:32:00 757 gops_subtract_1 753
2419 103 2013-02-20 15:32:00 758 Count1 754 gops_intersect_1
2420 103 2013-02-20 15:32:00 754 gops_intersect_1 755 get_flanks1
2421 103 2013-02-20 15:32:00 757 gops_subtract_1 755 get_flanks1
2422 103 2013-02-20 15:32:00 759 barchart_gnuplot 758 Count1
2423 106 2013-02-20 15:46:00 813 cshl_awk_tool 1.0.0 810 toolshed.g2.bx.psu.edu/repos/ryo-tas/macs14/peakcalling_macs14/1.4.1 1.4.1
2424 106 2013-02-20 15:46:00 814 gops_subtract_1 1.0.0 813 cshl_awk_tool 1.0.0
2425 106 2013-02-20 15:46:00 818 gops_intersect_1 1.0.0 813 cshl_awk_tool 1.0.0
2426 106 2013-02-20 15:46:00 814 gops_subtract_1 1.0.0 815 cshl_awk_tool 1.0.0
2427 106 2013-02-20 15:46:00 818 gops_intersect_1 1.0.0 815 cshl_awk_tool 1.0.0
2428 106 2013-02-20 15:46:00 815 cshl_awk_tool 1.0.0 816 get_flanks1 1.0.0
2429 106 2013-02-20 15:46:00 816 get_flanks1 1.0.0 817
2430 106 2013-02-20 15:46:00 819 Extract genomic DNA 1 2.2.2 818 gops_intersect_1 1.0.0
2431 106 2013-02-20 15:46:00 821 Count1 1.0.0 818 gops_intersect_1 1.0.0
2432 106 2013-02-20 15:46:00 819 Extract genomic DNA 1 2.2.2 820
2433 106 2013-02-20 15:46:00 831 Show beginning1 1.0.0 824 fasta2tab 1.1.0
2434 106 2013-02-20 15:46:00 829 tab2fasta 1.1.0 828 Show beginning1 1.0.0
2435 106 2013-02-20 15:46:00 832 tab2fasta 1.1.0 831 Show beginning1 1.0.0
2436 109 2013-02-20 15:49:00 881 cshl_awk_tool 879 toolshed.g2.bx.psu.edu/repos/ryo-tas/macs14/peakcalling_macs14/1.4.1
2437 109 2013-02-20 15:49:00 884 gops_intersect_1 883
2438 109 2013-02-20 15:49:00 888 Extract genomic DNA 1 884 gops_intersect_1
2439 109 2013-02-20 15:49:00 884 gops_intersect_1 885 get_flanks1
2440 109 2013-02-20 15:49:00 885 get_flanks1 886
2441 109 2013-02-20 15:49:00 890 fasta2tab 888 Extract genomic DNA 1
2442 109 2013-02-20 15:49:00 888 Extract genomic DNA 1 889
2443 110 2013-02-20 15:54:00 895 toolshed.g2.bx.psu.edu/repos/ryo-tas/macs14/peakcalling_macs14/1.4.1 1.4.1 894
2444 110 2013-02-20 15:54:00 895 toolshed.g2.bx.psu.edu/repos/ryo-tas/macs14/peakcalling_macs14/1.4.1 1.4.1 896
2445 110 2013-02-20 15:54:00 904 gops_intersect_1 1.0.0 900
2446 110 2013-02-20 15:54:00 913 Count1 1.0.0 901 gops_subtract_1 1.0.0
2447 110 2013-02-20 15:54:00 904 gops_intersect_1 1.0.0 902 get_flanks1 1.0.0
2448 110 2013-02-20 15:54:00 908 Show beginning1 1.0.0 907 fasta2tab 1.1.0
2449 111 2013-02-20 15:51:00 917 toolshed.g2.bx.psu.edu/repos/ryo-tas/macs14/peakcalling_macs14/1.4.1 916
2450 111 2013-02-20 15:51:00 919 cshl_awk_tool 917 toolshed.g2.bx.psu.edu/repos/ryo-tas/macs14/peakcalling_macs14/1.4.1
2451 111 2013-02-20 15:51:00 917 toolshed.g2.bx.psu.edu/repos/ryo-tas/macs14/peakcalling_macs14/1.4.1 918
2452 111 2013-02-20 15:51:00 923 gops_intersect_1 922
2453 111 2013-02-20 15:51:00 923 gops_intersect_1 924 get_flanks1
2454 111 2013-02-20 15:51:00 927 Extract genomic DNA 1 924 get_flanks1
2455 111 2013-02-20 15:51:00 924 get_flanks1 925
2456 111 2013-02-20 15:51:00 927 Extract genomic DNA 1 928
2457 111 2013-02-20 15:51:00 931 tab2fasta 930 Show beginning1
2458 111 2013-02-20 15:51:00 932 meme_meme 931 tab2fasta
2459 111 2013-02-20 15:51:00 934 barchart_gnuplot 933 Count1
2460 112 2013-02-20 15:51:00 937 toolshed.g2.bx.psu.edu/repos/ryo-tas/macs14/peakcalling_macs14/1.4.1 936
2461 112 2013-02-20 15:51:00 939 cshl_awk_tool 937 toolshed.g2.bx.psu.edu/repos/ryo-tas/macs14/peakcalling_macs14/1.4.1
2462 112 2013-02-20 15:51:00 940 cshl_awk_tool 937 toolshed.g2.bx.psu.edu/repos/ryo-tas/macs14/peakcalling_macs14/1.4.1
2463 112 2013-02-20 15:51:00 937 toolshed.g2.bx.psu.edu/repos/ryo-tas/macs14/peakcalling_macs14/1.4.1 938
2464 112 2013-02-20 15:51:00 943 gops_intersect_1 942
2465 112 2013-02-20 15:51:00 943 gops_intersect_1 944 get_flanks1
2466 112 2013-02-20 15:51:00 949 gops_intersect_1 944 get_flanks1
2467 112 2013-02-20 15:51:00 947 gops_intersect_1 946 get_flanks1
2468 112 2013-02-20 15:51:00 950 gops_subtract_1 947 gops_intersect_1
2469 112 2013-02-20 15:51:00 947 gops_intersect_1 948
2470 112 2013-02-20 15:51:00 949 gops_intersect_1 948
2471 112 2013-02-20 15:51:00 950 gops_subtract_1 948
2472 112 2013-02-20 15:51:00 951 Count1 950 gops_subtract_1
2473 112 2013-02-20 15:51:00 959 meme_meme 958 tab2fasta
2474 113 2013-02-20 15:52:00 961 toolshed.g2.bx.psu.edu/repos/ryo-tas/macs14/peakcalling_macs14/1.4.1 960
2475 113 2013-02-20 15:52:00 963 cshl_awk_tool 961 toolshed.g2.bx.psu.edu/repos/ryo-tas/macs14/peakcalling_macs14/1.4.1
2476 113 2013-02-20 15:52:00 961 toolshed.g2.bx.psu.edu/repos/ryo-tas/macs14/peakcalling_macs14/1.4.1 962
2477 113 2013-02-20 15:52:00 975 Count1 968 gops_intersect_1
2478 113 2013-02-20 15:52:00 977 Extract genomic DNA 1 968 gops_intersect_1
2479 113 2013-02-20 15:52:00 972 Count1 971 gops_subtract_1
2480 113 2013-02-20 15:52:00 973 barchart_gnuplot 972 Count1
2481 113 2013-02-20 15:52:00 974 barchart_gnuplot 972 Count1
2482 113 2013-02-20 15:52:00 976 barchart_gnuplot 975 Count1
2483 113 2013-02-20 15:52:00 977 Extract genomic DNA 1 978
2484 113 2013-02-20 15:52:00 980 Show beginning1 979 fasta2tab
2485 113 2013-02-20 15:52:00 981 tab2fasta 980 Show beginning1
2486 113 2013-02-20 15:52:00 982 meme_meme 981 tab2fasta
2487 114 2013-02-20 15:58:00 994 gops_subtract_1 990
2488 114 2013-02-20 15:58:00 996 Count1 991 gops_intersect_1
2489 114 2013-02-20 15:58:00 994 gops_subtract_1 992 get_flanks1
2490 114 2013-02-20 15:58:00 992 get_flanks1 993
2491 114 2013-02-20 15:58:00 1003 meme_meme 1002 tab2fasta
2492 114 2013-02-20 15:58:00 1004 meme_meme 1002 tab2fasta
2493 115 2013-02-20 16:00:00 1008 cshl_awk_tool 1.0.0 1006 toolshed.g2.bx.psu.edu/repos/ryo-tas/macs14/peakcalling_macs14/1.4.1 1.4.1
2494 115 2013-02-20 16:00:00 1013 gops_intersect_1 1.0.0 1008 cshl_awk_tool 1.0.0
2495 115 2013-02-20 16:00:00 1016 Extract genomic DNA 1 2.2.2 1009 gops_subtract_1 1.0.0
2496 115 2013-02-20 16:00:00 1013 gops_intersect_1 1.0.0 1010 cshl_awk_tool 1.0.0
2497 115 2013-02-20 16:00:00 1010 cshl_awk_tool 1.0.0 1011 get_flanks1 1.0.0
2498 115 2013-02-20 16:00:00 1014 Extract genomic DNA 1 2.2.2 1013 gops_intersect_1 1.0.0
2499 115 2013-02-20 16:00:00 1014 Extract genomic DNA 1 2.2.2 1015
2500 115 2013-02-20 16:00:00 1016 Extract genomic DNA 1 2.2.2 1015
2501 115 2013-02-20 16:00:00 1018 Show beginning1 1.0.0 1017 fasta2tab 1.1.0
2502 115 2013-02-20 16:00:00 1020 meme_meme 1.0.0 1019 tab2fasta 1.1.0
2503 115 2013-02-20 16:00:00 1022 Show beginning1 1.0.0 1021 fasta2tab 1.1.0
2504 115 2013-02-20 16:00:00 1023 tab2fasta 1.1.0 1022 Show beginning1 1.0.0
2505 115 2013-02-20 16:00:00 1026 barchart_gnuplot 1.0.0 1025 Count1 1.0.0
2506 115 2013-02-20 16:00:00 1028 barchart_gnuplot 1.0.0 1027 Count1 1.0.0
2507 116 2013-02-20 16:00:00 1030 toolshed.g2.bx.psu.edu/repos/ryo-tas/macs14/peakcalling_macs14/1.4.1 1.4.1 1029
2508 116 2013-02-20 16:00:00 1032 cshl_awk_tool 1.0.0 1030 toolshed.g2.bx.psu.edu/repos/ryo-tas/macs14/peakcalling_macs14/1.4.1 1.4.1
2509 116 2013-02-20 16:00:00 1030 toolshed.g2.bx.psu.edu/repos/ryo-tas/macs14/peakcalling_macs14/1.4.1 1.4.1 1031
2510 116 2013-02-20 16:00:00 1038 Extract genomic DNA 1 2.2.2 1037 gops_intersect_1 1.0.0
2511 116 2013-02-20 16:00:00 1049 Count1 1.0.0 1037 gops_intersect_1 1.0.0
2512 116 2013-02-20 16:00:00 1045 fasta2tab 1.1.0 1038 Extract genomic DNA 1 2.2.2
2513 116 2013-02-20 16:00:00 1038 Extract genomic DNA 1 2.2.2 1039
2514 116 2013-02-20 16:00:00 1042 Show beginning1 1.0.0 1041 fasta2tab 1.1.0
2515 116 2013-02-20 16:00:00 1043 tab2fasta 1.1.0 1042 Show beginning1 1.0.0
2516 116 2013-02-20 16:00:00 1046 Show beginning1 1.0.0 1045 fasta2tab 1.1.0
2517 116 2013-02-20 16:00:00 1047 tab2fasta 1.1.0 1046 Show beginning1 1.0.0
2518 116 2013-02-20 16:00:00 1048 meme_meme 1.0.0 1047 tab2fasta 1.1.0
2519 116 2013-02-20 16:00:00 1052 barchart_gnuplot 1.0.0 1051 Count1 1.0.0
2520 117 2013-02-20 16:00:00 1057 gops_subtract_1 1.0.0 1056 cshl_awk_tool 1.0.0
2521 117 2013-02-20 16:00:00 1061 gops_intersect_1 1.0.0 1056 cshl_awk_tool 1.0.0
2522 117 2013-02-20 16:00:00 1075 Count1 1.0.0 1057 gops_subtract_1 1.0.0
2523 117 2013-02-20 16:00:00 1057 gops_subtract_1 1.0.0 1058 cshl_awk_tool 1.0.0
2524 117 2013-02-20 16:00:00 1061 gops_intersect_1 1.0.0 1058 cshl_awk_tool 1.0.0
2525 117 2013-02-20 16:00:00 1058 cshl_awk_tool 1.0.0 1059 get_flanks1 1.0.0
2526 117 2013-02-20 16:00:00 1059 get_flanks1 1.0.0 1060
2527 117 2013-02-20 16:00:00 1062 Extract genomic DNA 1 2.2.2 1061 gops_intersect_1 1.0.0
2528 117 2013-02-20 16:00:00 1069 fasta2tab 1.1.0 1062 Extract genomic DNA 1 2.2.2
2529 117 2013-02-20 16:00:00 1062 Extract genomic DNA 1 2.2.2 1063
2530 117 2013-02-20 16:00:00 1065 fasta2tab 1.1.0 1064 Extract genomic DNA 1 2.2.2
2531 117 2013-02-20 16:00:00 1066 Show beginning1 1.0.0 1065 fasta2tab 1.1.0
2532 117 2013-02-20 16:00:00 1068 meme_meme 1.0.0 1067 tab2fasta 1.1.0
2533 117 2013-02-20 16:00:00 1071 tab2fasta 1.1.0 1070 Show beginning1 1.0.0
2534 117 2013-02-20 16:00:00 1072 meme_meme 1.0.0 1071 tab2fasta 1.1.0
2535 117 2013-02-20 16:00:00 1074 barchart_gnuplot 1.0.0 1073 Count1 1.0.0
2536 118 2013-02-20 16:00:00 1099 Count1 1.0.0 1081 gops_subtract_1 1.0.0
2537 118 2013-02-20 16:00:00 1097 Count1 1.0.0 1085 gops_intersect_1 1.0.0
2538 118 2013-02-20 16:00:00 1093 fasta2tab 1.1.0 1086 Extract genomic DNA 1 2.2.2
2539 118 2013-02-20 16:00:00 1089 fasta2tab 1.1.0 1088 Extract genomic DNA 1 2.2.2
2540 118 2013-02-20 16:00:00 1091 tab2fasta 1.1.0 1090 Show beginning1 1.0.0
2541 118 2013-02-20 16:00:00 1092 meme_meme 1.0.0 1091 tab2fasta 1.1.0
2542 119 2013-02-20 16:01:00 1102 toolshed.g2.bx.psu.edu/repos/ryo-tas/macs14/peakcalling_macs14/1.4.1 1.4.1 1101
2543 119 2013-02-20 16:01:00 1102 toolshed.g2.bx.psu.edu/repos/ryo-tas/macs14/peakcalling_macs14/1.4.1 1.4.1 1103
2544 119 2013-02-20 16:01:00 1105 gops_subtract_1 1.0.0 1104 cshl_awk_tool 1.0.0
2545 119 2013-02-20 16:01:00 1112 Extract genomic DNA 1 2.2.2 1105 gops_subtract_1 1.0.0
2546 119 2013-02-20 16:01:00 1105 gops_subtract_1 1.0.0 1106 cshl_awk_tool 1.0.0
2547 119 2013-02-20 16:01:00 1117 fasta2tab 1.1.0 1110 Extract genomic DNA 1 2.2.2
2548 119 2013-02-20 16:01:00 1112 Extract genomic DNA 1 2.2.2 1111
2549 119 2013-02-20 16:01:00 1115 tab2fasta 1.1.0 1114 Show beginning1 1.0.0
2550 119 2013-02-20 16:01:00 1116 meme_meme 1.0.0 1115 tab2fasta 1.1.0
2551 119 2013-02-20 16:01:00 1119 tab2fasta 1.1.0 1118 Show beginning1 1.0.0
2552 119 2013-02-20 16:01:00 1124 barchart_gnuplot 1.0.0 1123 Count1 1.0.0
2553 120 2013-02-20 16:02:00 1126 toolshed.g2.bx.psu.edu/repos/ryo-tas/macs14/peakcalling_macs14/1.4.1 1.4.1 1125
2554 120 2013-02-20 16:02:00 1126 toolshed.g2.bx.psu.edu/repos/ryo-tas/macs14/peakcalling_macs14/1.4.1 1.4.1 1127
2555 120 2013-02-20 16:02:00 1129 gops_subtract_1 1.0.0 1128 cshl_awk_tool 1.0.0
2556 120 2013-02-20 16:02:00 1136 Extract genomic DNA 1 2.2.2 1129 gops_subtract_1 1.0.0
2557 120 2013-02-20 16:02:00 1147 Count1 1.0.0 1129 gops_subtract_1 1.0.0
2558 120 2013-02-20 16:02:00 1129 gops_subtract_1 1.0.0 1130 cshl_awk_tool 1.0.0
2559 120 2013-02-20 16:02:00 1130 cshl_awk_tool 1.0.0 1131 get_flanks1 1.0.0
2560 120 2013-02-20 16:02:00 1141 fasta2tab 1.1.0 1134 Extract genomic DNA 1 2.2.2
2561 120 2013-02-20 16:02:00 1136 Extract genomic DNA 1 2.2.2 1135
2562 120 2013-02-20 16:02:00 1139 tab2fasta 1.1.0 1138 Show beginning1 1.0.0
2563 120 2013-02-20 16:02:00 1142 Show beginning1 1.0.0 1141 fasta2tab 1.1.0
2564 120 2013-02-20 16:02:00 1143 tab2fasta 1.1.0 1142 Show beginning1 1.0.0
2565 120 2013-02-20 16:02:00 1144 meme_meme 1.0.0 1143 tab2fasta 1.1.0
2566 120 2013-02-20 16:02:00 1146 barchart_gnuplot 1.0.0 1145 Count1 1.0.0
2567 120 2013-02-20 16:02:00 1148 barchart_gnuplot 1.0.0 1147 Count1 1.0.0
2568 121 2013-02-20 16:06:00 1150 toolshed.g2.bx.psu.edu/repos/ryo-tas/macs14/peakcalling_macs14/1.4.1 1.4.1 1149
2569 121 2013-02-20 16:06:00 1150 toolshed.g2.bx.psu.edu/repos/ryo-tas/macs14/peakcalling_macs14/1.4.1 1.4.1 1151
2570 121 2013-02-20 16:06:00 1157 gops_intersect_1 1.0.0 1152 cshl_awk_tool 1.0.0
2571 121 2013-02-20 16:06:00 1157 gops_intersect_1 1.0.0 1154 cshl_awk_tool 1.0.0
2572 121 2013-02-20 16:06:00 1154 cshl_awk_tool 1.0.0 1155 get_flanks1 1.0.0
2573 121 2013-02-20 16:06:00 1155 get_flanks1 1.0.0 1156
2574 121 2013-02-20 16:06:00 1166 Show beginning1 1.0.0 1165 fasta2tab 1.1.0
2575 121 2013-02-20 16:06:00 1168 meme_meme 1.0.0 1167 tab2fasta 1.1.0
2576 124 2013-02-21 16:53:00 1273 barchart_gnuplot 1.0.0 1264 cat1 1.0.0
2577 124 2013-02-21 16:53:00 1298 Paste1 1.0.0 1265 Cut1 1.0.1
2578 124 2013-02-21 16:53:00 1298 Paste1 1.0.0 1266 Cut1 1.0.1
2579 124 2013-02-21 16:53:00 1303 Add_a_column1 1.1.0 1275 Paste1 1.0.0
2580 124 2013-02-21 16:53:00 1283 Filter1 1.1.0 1279 gops_coverage_1 1.0.0
2581 124 2013-02-21 16:53:00 1290 Summary_Statistics1 1.1.0 1280 cshl_grep_tool 1.0.0
2582 124 2013-02-21 16:53:00 1292 Summary_Statistics1 1.1.0 1283 Filter1 1.1.0
2583 124 2013-02-21 16:53:00 1270 Cut1 1.0.1 1288 Summary_Statistics1 1.1.0
2584 124 2013-02-21 16:53:00 1266 Cut1 1.0.1 1292 Summary_Statistics1 1.1.0
2585 124 2013-02-21 16:53:00 1265 Cut1 1.0.1 1293 Summary_Statistics1 1.1.0
2586 124 2013-02-21 16:53:00 1267 Cut1 1.0.1 1295 Summary_Statistics1 1.1.0
2587 124 2013-02-21 16:53:00 1301 Add_a_column1 1.1.0 1298 Paste1 1.0.0
2588 124 2013-02-21 16:53:00 1263 addValue 1.0.0 1300 Add_a_column1 1.1.0
2589 124 2013-02-21 16:53:00 1286 addValue 1.0.0 1303 Add_a_column1 1.1.0
2590 124 2013-02-21 16:53:00 1287 addValue 1.0.0 1304 Add_a_column1 1.1.0
2591 124 2013-02-21 16:53:00 1300 Add_a_column1 1.1.0 1305 Paste1 1.0.0
2592 125 2013-02-21 16:55:00 1313 addValue 1.0.0 1311 wc_gnu 1.0.0
2593 125 2013-02-21 16:55:00 1314 cshl_awk_tool 1.0.0 1312 sort1 1.0.1
2594 125 2013-02-21 16:55:00 1308 cat1 1.0.0 1313 addValue 1.0.0
2595 125 2013-02-21 16:55:00 1308 cat1 1.0.0 1315 Count1 1.0.0
2596 125 2013-02-21 16:55:00 1309 bedtools_intersectBed 1318
2597 125 2013-02-21 16:55:00 1310 bedtools_intersectBed 1318
2598 125 2013-02-21 16:55:00 1309 bedtools_intersectBed 1319
2599 125 2013-02-21 16:55:00 1310 bedtools_intersectBed 1319
2600 127 2013-02-22 13:15:00 1336 wc_gnu 1.0.0 1334 toolshed.g2.bx.psu.edu/repos/aaronquinlan/bedtools/bedtools_intersectbed_bam/0.1.0 0.1.0
2601 127 2013-02-22 13:15:00 1338 addValue 1.0.0 1336 wc_gnu 1.0.0
2602 127 2013-02-22 13:15:00 1340 Count1 1.0.0 1341 cshl_uniq_tool 1.0.0
2603 127 2013-02-22 13:15:00 1334 toolshed.g2.bx.psu.edu/repos/aaronquinlan/bedtools/bedtools_intersectbed_bam/0.1.0 0.1.0 1342
2604 127 2013-02-22 13:15:00 1335 toolshed.g2.bx.psu.edu/repos/aaronquinlan/bedtools/bedtools_intersectbed_bam/0.1.0 0.1.0 1342
2605 127 2013-02-22 13:15:00 1334 toolshed.g2.bx.psu.edu/repos/aaronquinlan/bedtools/bedtools_intersectbed_bam/0.1.0 0.1.0 1343
2606 127 2013-02-22 13:15:00 1335 toolshed.g2.bx.psu.edu/repos/aaronquinlan/bedtools/bedtools_intersectbed_bam/0.1.0 0.1.0 1343
2607 129 2013-02-22 13:29:00 1360 wc_gnu 1.0.0 1358 toolshed.g2.bx.psu.edu/repos/aaronquinlan/bedtools/bedtools_intersectbed_bam/0.1.0 0.1.0
2608 129 2013-02-22 13:29:00 1362 addValue 1.0.0 1360 wc_gnu 1.0.0
2609 129 2013-02-22 13:29:00 1357 cat1 1.0.0 1362 addValue 1.0.0
2610 129 2013-02-22 13:29:00 1357 cat1 1.0.0 1364 Count1 1.0.0
2611 129 2013-02-22 13:29:00 1358 toolshed.g2.bx.psu.edu/repos/aaronquinlan/bedtools/bedtools_intersectbed_bam/0.1.0 0.1.0 1366
2612 129 2013-02-22 13:29:00 1359 toolshed.g2.bx.psu.edu/repos/aaronquinlan/bedtools/bedtools_intersectbed_bam/0.1.0 0.1.0 1366
2613 129 2013-02-22 13:29:00 1358 toolshed.g2.bx.psu.edu/repos/aaronquinlan/bedtools/bedtools_intersectbed_bam/0.1.0 0.1.0 1367
2614 129 2013-02-22 13:29:00 1359 toolshed.g2.bx.psu.edu/repos/aaronquinlan/bedtools/bedtools_intersectbed_bam/0.1.0 0.1.0 1367
2615 130 2013-02-22 13:55:00 1368 barchart_gnuplot 1.0.0 1369 cat1 1.0.0
2616 130 2013-02-22 13:55:00 1372 wc_gnu 1.0.0 1370 toolshed.g2.bx.psu.edu/repos/aaronquinlan/bedtools/bedtools_intersectbed_bam/0.1.0 0.1.0
2617 130 2013-02-22 13:55:00 1375 cshl_awk_tool 1.0.0 1373 sort1 1.0.1
2618 130 2013-02-22 13:55:00 1376 Count1 1.0.0 1377 cshl_uniq_tool 1.0.0
2619 130 2013-02-22 13:55:00 1371 toolshed.g2.bx.psu.edu/repos/aaronquinlan/bedtools/bedtools_intersectbed_bam/0.1.0 0.1.0 1378
2620 130 2013-02-22 13:55:00 1371 toolshed.g2.bx.psu.edu/repos/aaronquinlan/bedtools/bedtools_intersectbed_bam/0.1.0 0.1.0 1379
2621 131 2013-02-22 14:30:00 1381 cshl_find_and_replace 1380
2622 131 2013-02-22 14:30:00 1382 gops_intersect_1 1380
2623 131 2013-02-22 14:30:00 1387 Cut1 1382 gops_intersect_1
2624 131 2013-02-22 14:30:00 1382 gops_intersect_1 1383 CONVERTER_interval_to_bed_0
2625 131 2013-02-22 14:30:00 1383 CONVERTER_interval_to_bed_0 1384 Cut1
2626 131 2013-02-22 14:30:00 1388 cshl_uniq_tool 1387 Cut1
2627 133 2013-02-22 15:23:00 1396 bams2ratio 1389
2628 133 2013-02-22 15:23:00 1396 bams2ratio 1393
2629 133 2013-02-22 15:23:00 1399 get_flanks1 1400
2630 133 2013-02-22 15:23:00 1405 fasta2tab 1403 Extract genomic DNA 1
2631 133 2013-02-22 15:23:00 1406 Show beginning1 1405 fasta2tab
2632 133 2013-02-22 15:23:00 1407 tab2fasta 1406 Show beginning1
2633 139 2013-02-22 18:45:00 1471 tab2fasta 1.1.0 1472 Show beginning1 1.0.0
2634 141 2013-02-22 18:57:00 1489 cshl_uniq_tool 1.0.0 1490 gops_intersect_1 1.0.0
2635 142 2013-02-25 10:04:00 1494 cat1 1.0.0 1493 addValue 1.0.0
2636 142 2013-02-25 10:04:00 1503 barchart_gnuplot 1.0.0 1494 cat1 1.0.0
2637 142 2013-02-25 10:04:00 1528 Paste1 1.0.0 1495 Cut1 1.0.1
2638 142 2013-02-25 10:04:00 1528 Paste1 1.0.0 1496 Cut1 1.0.1
2639 142 2013-02-25 10:04:00 1535 Paste1 1.0.0 1497 Cut1 1.0.1
2640 142 2013-02-25 10:04:00 1535 Paste1 1.0.0 1498 Cut1 1.0.1
2641 142 2013-02-25 10:04:00 1505 Paste1 1.0.0 1499 Cut1 1.0.1
2642 142 2013-02-25 10:04:00 1505 Paste1 1.0.0 1500 Cut1 1.0.1
2643 142 2013-02-25 10:04:00 1533 Add_a_column1 1.1.0 1505 Paste1 1.0.0
2644 142 2013-02-25 10:04:00 1494 cat1 1.0.0 1506 addValue 1.0.0
2645 142 2013-02-25 10:04:00 1494 cat1 1.0.0 1507 addValue 1.0.0
2646 142 2013-02-25 10:04:00 1514 Summary_Statistics1 1.1.0 1508 Filter1 1.1.0
2647 142 2013-02-25 10:04:00 1513 Filter1 1.1.0 1509 gops_coverage_1 1.0.0
2648 142 2013-02-25 10:04:00 1521 Summary_Statistics1 1.1.0 1510 cshl_grep_tool 1.0.0
2649 142 2013-02-25 10:04:00 1518 Summary_Statistics1 1.1.0 1511 Filter1 1.1.0
2650 142 2013-02-25 10:04:00 1525 Summary_Statistics1 1.1.0 1512 Filter1 1.1.0
2651 142 2013-02-25 10:04:00 1522 Summary_Statistics1 1.1.0 1513 Filter1 1.1.0
2652 142 2013-02-25 10:04:00 1523 Summary_Statistics1 1.1.0 1513 Filter1 1.1.0
2653 142 2013-02-25 10:04:00 1527 Cut1 1.0.1 1515 Summary_Statistics1 1.1.0
2654 142 2013-02-25 10:04:00 1494 cat1 1.0.0 1516 addValue 1.0.0
2655 142 2013-02-25 10:04:00 1494 cat1 1.0.0 1517 addValue 1.0.0
2656 142 2013-02-25 10:04:00 1496 Cut1 1.0.1 1522 Summary_Statistics1 1.1.0
2657 142 2013-02-25 10:04:00 1495 Cut1 1.0.1 1523 Summary_Statistics1 1.1.0
2658 142 2013-02-25 10:04:00 1532 Add_a_column1 1.1.0 1529 Paste1 1.0.0
2659 142 2013-02-25 10:04:00 1507 addValue 1.0.0 1531 Add_a_column1 1.1.0
2660 142 2013-02-25 10:04:00 1516 addValue 1.0.0 1533 Add_a_column1 1.1.0
2661 142 2013-02-25 10:04:00 1517 addValue 1.0.0 1534 Add_a_column1 1.1.0
2662 142 2013-02-25 10:04:00 1530 Add_a_column1 1.1.0 1535 Paste1 1.0.0
2663 148 2013-03-17 21:43:00 1605 Filter1 1.1.0 1604
2664 148 2013-03-17 21:43:00 1607 Filter1 1.1.0 1604
2665 148 2013-03-17 21:43:00 1609 Filter1 1.1.0 1604
2666 148 2013-03-17 21:43:00 1611 Filter1 1.1.0 1604
2667 148 2013-03-17 21:43:00 1617 Filter1 1.1.0 1604
2668 148 2013-03-17 21:43:00 1619 Filter1 1.1.0 1604
2669 148 2013-03-17 21:43:00 1625 Filter1 1.1.0 1604
2670 148 2013-03-17 21:43:00 1627 Filter1 1.1.0 1604
2671 148 2013-03-17 21:43:00 1606 Paste1 1.0.0 1605 Filter1 1.1.0
2672 148 2013-03-17 21:43:00 1608 Paste1 1.0.0 1606 Paste1 1.0.0
2673 148 2013-03-17 21:43:00 1606 Paste1 1.0.0 1607 Filter1 1.1.0
2674 148 2013-03-17 21:43:00 1610 Paste1 1.0.0 1608 Paste1 1.0.0
2675 148 2013-03-17 21:43:00 1608 Paste1 1.0.0 1609 Filter1 1.1.0
2676 148 2013-03-17 21:43:00 1612 Paste1 1.0.0 1610 Paste1 1.0.0
2677 148 2013-03-17 21:43:00 1610 Paste1 1.0.0 1611 Filter1 1.1.0
2678 148 2013-03-17 21:43:00 1614 Paste1 1.0.0 1612 Paste1 1.0.0
2679 148 2013-03-17 21:43:00 1612 Paste1 1.0.0 1613 Filter1 1.1.0
2680 148 2013-03-17 21:43:00 1616 Paste1 1.0.0 1614 Paste1 1.0.0
2681 148 2013-03-17 21:43:00 1614 Paste1 1.0.0 1615 Filter1 1.1.0
2682 148 2013-03-17 21:43:00 1616 Paste1 1.0.0 1617 Filter1 1.1.0
2683 148 2013-03-17 21:43:00 1620 Paste1 1.0.0 1618 Paste1 1.0.0
2684 148 2013-03-17 21:43:00 1622 Paste1 1.0.0 1620 Paste1 1.0.0
2685 148 2013-03-17 21:43:00 1620 Paste1 1.0.0 1621 Filter1 1.1.0
2686 148 2013-03-17 21:43:00 1624 Paste1 1.0.0 1622 Paste1 1.0.0
2687 148 2013-03-17 21:43:00 1622 Paste1 1.0.0 1623 Filter1 1.1.0
2688 148 2013-03-17 21:43:00 1624 Paste1 1.0.0 1625 Filter1 1.1.0
2689 148 2013-03-17 21:43:00 1628 Cut1 1.0.1 1626 Paste1 1.0.0
2690 148 2013-03-17 21:43:00 1631 Add_a_column1 1.1.0 1630 Add_a_column1 1.1.0
2691 148 2013-03-17 21:43:00 1633 Add_a_column1 1.1.0 1632 Add_a_column1 1.1.0
2692 148 2013-03-17 21:43:00 1635 Add_a_column1 1.1.0 1634 Add_a_column1 1.1.0
2693 148 2013-03-17 21:43:00 1641 Add_a_column1 1.1.0 1640 Add_a_column1 1.1.0
2694 148 2013-03-17 21:43:00 1643 XY_Plot_1 1.0.1 1642 Cut1 1.0.1
2695 148 2013-03-17 21:43:00 1643 XY_Plot_1 1.0.1 1642 Cut1 1.0.1
2696 148 2013-03-17 21:43:00 1643 XY_Plot_1 1.0.1 1642 Cut1 1.0.1
2697 148 2013-03-17 21:43:00 1643 XY_Plot_1 1.0.1 1642 Cut1 1.0.1
2698 148 2013-03-17 21:43:00 1643 XY_Plot_1 1.0.1 1642 Cut1 1.0.1
2699 150 2013-03-25 09:27:00 1657 Grouping1 2.0.0 1655 gops_join_1 1.0.0
2700 150 2013-03-25 09:27:00 1658 sort1 1.0.1 1657 Grouping1 2.0.0
2701 153 2013-04-09 12:18:00 1774 toolshed.g2.bx.psu.edu/repos/aaronquinlan/bedtools/bedtools_mergebedgraph/0.1.0 0.1.0 1773 Cut1 1.0.1
2702 153 2013-04-09 12:18:00 1774 toolshed.g2.bx.psu.edu/repos/aaronquinlan/bedtools/bedtools_mergebedgraph/0.1.0 0.1.0 1775 Cut1 1.0.1
2703 153 2013-04-09 12:18:00 1775 Cut1 1.0.1 1776 Add_a_column1 1.1.0
2704 153 2013-04-09 12:18:00 1776 Add_a_column1 1.1.0 1777 toolshed.g2.bx.psu.edu/repos/aaronquinlan/bedtools/bedtools_multiintersectbed/0.1.0 0.1.0
2705 153 2013-04-09 12:18:00 1777 toolshed.g2.bx.psu.edu/repos/aaronquinlan/bedtools/bedtools_multiintersectbed/0.1.0 0.1.0 1778
2706 153 2013-04-09 12:18:00 1777 toolshed.g2.bx.psu.edu/repos/aaronquinlan/bedtools/bedtools_multiintersectbed/0.1.0 0.1.0 1779
2707 153 2013-04-09 12:18:00 1777 toolshed.g2.bx.psu.edu/repos/aaronquinlan/bedtools/bedtools_multiintersectbed/0.1.0 0.1.0 1780
2708 153 2013-04-09 12:18:00 1777 toolshed.g2.bx.psu.edu/repos/aaronquinlan/bedtools/bedtools_multiintersectbed/0.1.0 0.1.0 1781
2709 153 2013-04-09 12:18:00 1777 toolshed.g2.bx.psu.edu/repos/aaronquinlan/bedtools/bedtools_multiintersectbed/0.1.0 0.1.0 1782
2710 153 2013-04-09 12:18:00 1777 toolshed.g2.bx.psu.edu/repos/aaronquinlan/bedtools/bedtools_multiintersectbed/0.1.0 0.1.0 1783
2711 153 2013-04-09 12:18:00 1777 toolshed.g2.bx.psu.edu/repos/aaronquinlan/bedtools/bedtools_multiintersectbed/0.1.0 0.1.0 1784
2712 153 2013-04-09 12:18:00 1777 toolshed.g2.bx.psu.edu/repos/aaronquinlan/bedtools/bedtools_multiintersectbed/0.1.0 0.1.0 1785
2713 153 2013-04-09 12:18:00 1777 toolshed.g2.bx.psu.edu/repos/aaronquinlan/bedtools/bedtools_multiintersectbed/0.1.0 0.1.0 1786
2714 153 2013-04-09 12:18:00 1777 toolshed.g2.bx.psu.edu/repos/aaronquinlan/bedtools/bedtools_multiintersectbed/0.1.0 0.1.0 1787
2715 153 2013-04-09 12:18:00 1777 toolshed.g2.bx.psu.edu/repos/aaronquinlan/bedtools/bedtools_multiintersectbed/0.1.0 0.1.0 1788
2716 153 2013-04-09 12:18:00 1777 toolshed.g2.bx.psu.edu/repos/aaronquinlan/bedtools/bedtools_multiintersectbed/0.1.0 0.1.0 1789
2717 153 2013-04-09 12:18:00 1777 toolshed.g2.bx.psu.edu/repos/aaronquinlan/bedtools/bedtools_multiintersectbed/0.1.0 0.1.0 1790
2718 153 2013-04-09 12:18:00 1777 toolshed.g2.bx.psu.edu/repos/aaronquinlan/bedtools/bedtools_multiintersectbed/0.1.0 0.1.0 1791
2719 153 2013-04-09 12:18:00 1777 toolshed.g2.bx.psu.edu/repos/aaronquinlan/bedtools/bedtools_multiintersectbed/0.1.0 0.1.0 1792
2720 153 2013-04-09 12:18:00 1777 toolshed.g2.bx.psu.edu/repos/aaronquinlan/bedtools/bedtools_multiintersectbed/0.1.0 0.1.0 1793
2721 153 2013-04-09 12:18:00 1777 toolshed.g2.bx.psu.edu/repos/aaronquinlan/bedtools/bedtools_multiintersectbed/0.1.0 0.1.0 1794
2722 153 2013-04-09 12:18:00 1777 toolshed.g2.bx.psu.edu/repos/aaronquinlan/bedtools/bedtools_multiintersectbed/0.1.0 0.1.0 1795
2723 153 2013-04-09 12:18:00 1777 toolshed.g2.bx.psu.edu/repos/aaronquinlan/bedtools/bedtools_multiintersectbed/0.1.0 0.1.0 1796
2724 153 2013-04-09 12:18:00 1777 toolshed.g2.bx.psu.edu/repos/aaronquinlan/bedtools/bedtools_multiintersectbed/0.1.0 0.1.0 1797
2725 153 2013-04-09 12:18:00 1800 gops_intersect_1 1.0.0 1799 Filter1 1.1.0
2726 153 2013-04-09 12:18:00 1803 Cut1 1.0.1 1800 gops_intersect_1 1.0.0
2727 153 2013-04-09 12:18:00 1800 gops_intersect_1 1.0.0 1801 Cut1 1.0.1
2728 153 2013-04-09 12:18:00 1804 sort1 1.0.1 1803 Cut1 1.0.1
2729 153 2013-04-09 12:18:00 1805 cshl_uniq_tool 1.0.0 1804 sort1 1.0.1
2730 155 2013-04-10 19:28:00 1824 sam_to_bam 1.1.2 1818 bismark_bowtie 0.7.7.3
2731 158 2013-04-18 07:56:00 1889 Filter1 1.1.0 1888 Cut1 1.0.1
2732 158 2013-04-18 07:56:00 1893 cshl_find_and_replace 1.0.0 1892 cshl_find_and_replace 1.0.0
2733 158 2013-04-18 07:56:00 1894 cshl_find_and_replace 1.0.0 1893 cshl_find_and_replace 1.0.0
2734 158 2013-04-18 07:56:00 1896 cshl_find_and_replace 1.0.0 1895 cshl_find_and_replace 1.0.0
2735 158 2013-04-18 07:56:00 1897 cshl_find_and_replace 1.0.0 1896 cshl_find_and_replace 1.0.0
2736 158 2013-04-18 07:56:00 1899 Add_a_column1 1.1.0 1898 cshl_find_and_replace 1.0.0
2737 158 2013-04-18 07:56:00 1900 Add_a_column1 1.1.0 1899 Add_a_column1 1.1.0
2738 158 2013-04-18 07:56:00 1902 addValue 1.0.0 1901 Cut1 1.0.1
2739 159 2013-04-28 20:36:00 1906 sort1 1905 mergeCols1
2740 159 2013-04-28 20:36:00 1907 Cut1 1906 sort1
2741 159 2013-04-28 20:36:00 1908 methtools_destrand 1907 Cut1
2742 160 2013-04-28 20:36:00 1911 Cut1 1910 sort1
2743 162 2013-05-17 14:43:00 1920 toolshed.g2.bx.psu.edu/repos/ryo-tas/macs14/peakcalling_macs14/1.4.1 1.4.1 1919
2744 162 2013-05-17 14:43:00 1922 cshl_awk_tool 1.0.0 1920 toolshed.g2.bx.psu.edu/repos/ryo-tas/macs14/peakcalling_macs14/1.4.1 1.4.1
2745 162 2013-05-17 14:43:00 1920 toolshed.g2.bx.psu.edu/repos/ryo-tas/macs14/peakcalling_macs14/1.4.1 1.4.1 1921
2746 162 2013-05-17 14:43:00 1923 gops_subtract_1 1.0.0 1922 cshl_awk_tool 1.0.0
2747 162 2013-05-17 14:43:00 1923 gops_subtract_1 1.0.0 1924 cshl_awk_tool 1.0.0
2748 162 2013-05-17 14:43:00 1925 get_flanks1 1.0.0 1926
2749 162 2013-05-17 14:43:00 1928 Extract genomic DNA 1 2.2.2 1927 gops_intersect_1 1.0.0
2750 162 2013-05-17 14:43:00 1935 fasta2tab 1.1.0 1928 Extract genomic DNA 1 2.2.2
2751 162 2013-05-17 14:43:00 1928 Extract genomic DNA 1 2.2.2 1929
2752 162 2013-05-17 14:43:00 1931 fasta2tab 1.1.0 1930 Extract genomic DNA 1 2.2.2
2753 162 2013-05-17 14:43:00 1932 Show beginning1 1.0.0 1931 fasta2tab 1.1.0
2754 162 2013-05-17 14:43:00 1934 meme_meme 1.0.0 1933 tab2fasta 1.1.0
2755 162 2013-05-17 14:43:00 1942 barchart_gnuplot 1.0.0 1941 Count1 1.0.0
2756 164 2013-05-20 16:05:00 1967 bam2wig 1.3 1966 samtools_rmdup 1.0.0
2757 164 2013-05-20 16:05:00 1971 samtools_rmdup 1.0.0 1970 bowtie2 0.1
2758 164 2013-05-20 16:05:00 1975 samtools_rmdup 1.0.0 1974 bowtie2 0.1
2759 164 2013-05-20 16:05:00 1979 samtools_rmdup 1.0.0 1978 bowtie2 0.1
2760 164 2013-05-20 16:05:00 1982 bowtie2 0.1 1981
2761 165 2013-05-23 17:21:00 1989 toolshed.g2.bx.psu.edu/repos/bjoern-gruening/trim_galore/trim_galore/0.2.4.1 1988
2762 165 2013-05-23 17:21:00 1989 toolshed.g2.bx.psu.edu/repos/bjoern-gruening/trim_galore/trim_galore/0.2.4.1 1990
2763 171 2013-05-31 10:17:00 2175 Filter1 2174 Cut1
2764 171 2013-05-31 10:17:00 2177 cshl_find_and_replace 2176 Add_a_column1
2765 171 2013-05-31 10:17:00 2178 cshl_find_and_replace 2177 cshl_find_and_replace
2766 171 2013-05-31 10:17:00 2179 cshl_find_and_replace 2178 cshl_find_and_replace
2767 171 2013-05-31 10:17:00 2180 cshl_find_and_replace 2179 cshl_find_and_replace
2768 171 2013-05-31 10:17:00 2181 cshl_find_and_replace 2180 cshl_find_and_replace
2769 171 2013-05-31 10:17:00 2186 Add_a_column1 2185 Add_a_column1
2770 171 2013-05-31 10:17:00 2188 addValue 2187 Cut1
2771 171 2013-05-31 10:17:00 2191 sam_merge2 2190 sam_to_bam
2772 171 2013-05-31 10:17:00 2191 sam_merge2 2192 sam_to_bam
2773 171 2013-05-31 10:17:00 2191 sam_merge2 2193 sam_to_bam
2774 171 2013-05-31 10:17:00 2191 sam_merge2 2194 sam_to_bam
2775 171 2013-05-31 10:17:00 2191 sam_merge2 2195 sam_to_bam
2776 171 2013-05-31 10:17:00 2191 sam_merge2 2196 sam_to_bam
2777 171 2013-05-31 10:17:00 2191 sam_merge2 2197 sam_to_bam
2778 171 2013-05-31 10:17:00 2191 sam_merge2 2198 sam_to_bam
2779 171 2013-05-31 10:17:00 2200 methtools_calling 2199 samtools_rmdup
2780 171 2013-05-31 10:17:00 2204 Filter1 2200 methtools_calling
2781 171 2013-05-31 10:17:00 2205 gops_subtract_1 2200 methtools_calling
2782 171 2013-05-31 10:17:00 2203 Add_a_column1 2202 Add_a_column1
2783 174 2013-06-09 19:14:00 2333 cuffmerge 0.0.5 2312 cufflinks 0.0.5
2784 174 2013-06-09 19:14:00 2333 cuffmerge 0.0.5 2313 cufflinks 0.0.5
2785 174 2013-06-09 19:14:00 2333 cuffmerge 0.0.5 2314 cufflinks 0.0.5
2786 174 2013-06-09 19:14:00 2333 cuffmerge 0.0.5 2315 cufflinks 0.0.5
2787 174 2013-06-09 19:14:00 2341 tophat2 0.5 2318 toolshed.g2.bx.psu.edu/repos/bjoern-gruening/trim_galore/trim_galore/0.2.4.1 0.2.4.1
2788 174 2013-06-09 19:14:00 2341 tophat2 0.5 2318 toolshed.g2.bx.psu.edu/repos/bjoern-gruening/trim_galore/trim_galore/0.2.4.1 0.2.4.1
2789 174 2013-06-09 19:14:00 2340 tophat2 0.5 2319 toolshed.g2.bx.psu.edu/repos/bjoern-gruening/trim_galore/trim_galore/0.2.4.1 0.2.4.1
2790 174 2013-06-09 19:14:00 2340 tophat2 0.5 2319 toolshed.g2.bx.psu.edu/repos/bjoern-gruening/trim_galore/trim_galore/0.2.4.1 0.2.4.1
2791 174 2013-06-09 19:14:00 2339 tophat2 0.5 2320 toolshed.g2.bx.psu.edu/repos/bjoern-gruening/trim_galore/trim_galore/0.2.4.1 0.2.4.1
2792 174 2013-06-09 19:14:00 2339 tophat2 0.5 2320 toolshed.g2.bx.psu.edu/repos/bjoern-gruening/trim_galore/trim_galore/0.2.4.1 0.2.4.1
2793 174 2013-06-09 19:14:00 2333 cuffmerge 0.0.5 2325 cufflinks 0.0.5
2794 174 2013-06-09 19:14:00 2333 cuffmerge 0.0.5 2326 cufflinks 0.0.5
2795 174 2013-06-09 19:14:00 2333 cuffmerge 0.0.5 2327 cufflinks 0.0.5
2796 174 2013-06-09 19:14:00 2333 cuffmerge 0.0.5 2328 cufflinks 0.0.5
2797 174 2013-06-09 19:14:00 2335 tophat2 0.5 2329 toolshed.g2.bx.psu.edu/repos/bjoern-gruening/trim_galore/trim_galore/0.2.4.1 0.2.4.1
2798 174 2013-06-09 19:14:00 2335 tophat2 0.5 2329 toolshed.g2.bx.psu.edu/repos/bjoern-gruening/trim_galore/trim_galore/0.2.4.1 0.2.4.1
2799 174 2013-06-09 19:14:00 2334 tophat2 0.5 2330 toolshed.g2.bx.psu.edu/repos/bjoern-gruening/trim_galore/trim_galore/0.2.4.1 0.2.4.1
2800 174 2013-06-09 19:14:00 2334 tophat2 0.5 2330 toolshed.g2.bx.psu.edu/repos/bjoern-gruening/trim_galore/trim_galore/0.2.4.1 0.2.4.1
2801 174 2013-06-09 19:14:00 2333 cuffmerge 0.0.5 2332 cufflinks 0.0.5
2802 174 2013-06-09 19:14:00 2315 cufflinks 0.0.5 2334 tophat2 0.5
2803 174 2013-06-09 19:14:00 2313 cufflinks 0.0.5 2335 tophat2 0.5
2804 174 2013-06-09 19:14:00 2325 cufflinks 0.0.5 2339 tophat2 0.5
2805 174 2013-06-09 19:14:00 2327 cufflinks 0.0.5 2341 tophat2 0.5
2806 174 2013-06-09 19:14:00 2314 cufflinks 0.0.5 2342 tophat2 0.5
2807 174 2013-06-09 19:14:00 2312 cufflinks 0.0.5 2343 tophat2 0.5
2808 174 2013-06-09 19:14:00 2333 cuffmerge 0.0.5 2344 cufflinks 0.0.5
2809 174 2013-06-09 19:14:00 2312 cufflinks 0.0.5 2345
2810 174 2013-06-09 19:14:00 2313 cufflinks 0.0.5 2345
2811 174 2013-06-09 19:14:00 2314 cufflinks 0.0.5 2345
2812 174 2013-06-09 19:14:00 2315 cufflinks 0.0.5 2345
2813 174 2013-06-09 19:14:00 2325 cufflinks 0.0.5 2345
2814 174 2013-06-09 19:14:00 2327 cufflinks 0.0.5 2345
2815 174 2013-06-09 19:14:00 2333 cuffmerge 0.0.5 2345
2816 174 2013-06-09 19:14:00 2334 tophat2 0.5 2345
2817 174 2013-06-09 19:14:00 2335 tophat2 0.5 2345
2818 174 2013-06-09 19:14:00 2339 tophat2 0.5 2345
2819 174 2013-06-09 19:14:00 2340 tophat2 0.5 2345
2820 174 2013-06-09 19:14:00 2341 tophat2 0.5 2345
2821 174 2013-06-09 19:14:00 2318 toolshed.g2.bx.psu.edu/repos/bjoern-gruening/trim_galore/trim_galore/0.2.4.1 0.2.4.1 2346
2822 174 2013-06-09 19:14:00 2318 toolshed.g2.bx.psu.edu/repos/bjoern-gruening/trim_galore/trim_galore/0.2.4.1 0.2.4.1 2347
2823 174 2013-06-09 19:14:00 2319 toolshed.g2.bx.psu.edu/repos/bjoern-gruening/trim_galore/trim_galore/0.2.4.1 0.2.4.1 2348
2824 174 2013-06-09 19:14:00 2319 toolshed.g2.bx.psu.edu/repos/bjoern-gruening/trim_galore/trim_galore/0.2.4.1 0.2.4.1 2349
2825 174 2013-06-09 19:14:00 2322 toolshed.g2.bx.psu.edu/repos/bjoern-gruening/trim_galore/trim_galore/0.2.4.1 0.2.4.1 2354
2826 174 2013-06-09 19:14:00 2322 toolshed.g2.bx.psu.edu/repos/bjoern-gruening/trim_galore/trim_galore/0.2.4.1 0.2.4.1 2355
2827 174 2013-06-09 19:14:00 2329 toolshed.g2.bx.psu.edu/repos/bjoern-gruening/trim_galore/trim_galore/0.2.4.1 0.2.4.1 2360
2828 174 2013-06-09 19:14:00 2329 toolshed.g2.bx.psu.edu/repos/bjoern-gruening/trim_galore/trim_galore/0.2.4.1 0.2.4.1 2361
2829 174 2013-06-09 19:14:00 2330 toolshed.g2.bx.psu.edu/repos/bjoern-gruening/trim_galore/trim_galore/0.2.4.1 0.2.4.1 2362
2830 174 2013-06-09 19:14:00 2330 toolshed.g2.bx.psu.edu/repos/bjoern-gruening/trim_galore/trim_galore/0.2.4.1 0.2.4.1 2363
2831 174 2013-06-09 19:14:00 2337 toolshed.g2.bx.psu.edu/repos/bjoern-gruening/trim_galore/trim_galore/0.2.4.1 0.2.4.1 2364
2832 174 2013-06-09 19:14:00 2337 toolshed.g2.bx.psu.edu/repos/bjoern-gruening/trim_galore/trim_galore/0.2.4.1 0.2.4.1 2365
2833 176 2013-06-12 15:39:00 2384 sam_merge2 2375 sam_to_bam
2834 176 2013-06-12 15:39:00 2384 sam_merge2 2376 sam_to_bam
2835 176 2013-06-12 15:39:00 2384 sam_merge2 2377 sam_to_bam
2836 176 2013-06-12 15:39:00 2384 sam_merge2 2378 sam_to_bam
2837 176 2013-06-12 15:39:00 2384 sam_merge2 2379 sam_to_bam
2838 176 2013-06-12 15:39:00 2384 sam_merge2 2380 sam_to_bam
2839 176 2013-06-12 15:39:00 2384 sam_merge2 2381 sam_to_bam
2840 176 2013-06-12 15:39:00 2384 sam_merge2 2382 sam_to_bam
2841 176 2013-06-12 15:39:00 2386 samtools_rmdup 2384 sam_merge2
2842 176 2013-06-12 15:39:00 2389 cshl_find_and_replace 2387 Add_a_column1
2843 176 2013-06-12 15:39:00 2391 Filter1 2388 methtools_calling
2844 176 2013-06-12 15:39:00 2393 cshl_find_and_replace 2389 cshl_find_and_replace
2845 176 2013-06-12 15:39:00 2394 Add_a_column1 2390 Filter1
2846 176 2013-06-12 15:39:00 2395 cshl_sort_header 2392 gops_subtract_1
2847 176 2013-06-12 15:39:00 2398 methtools_destrand 2395 cshl_sort_header
2848 176 2013-06-12 15:39:00 2401 cshl_find_and_replace 2400 cshl_find_and_replace
2849 176 2013-06-12 15:39:00 2402 cshl_find_and_replace 2401 cshl_find_and_replace
2850 176 2013-06-12 15:39:00 2404 Add_a_column1 2403 cshl_find_and_replace
2851 176 2013-06-12 15:39:00 2405 Add_a_column1 2404 Add_a_column1
2852 176 2013-06-12 15:39:00 2407 addValue 2406 Cut1
2853 179 2013-06-12 20:23:00 2442 methtools_filter 0.1.1 2443 Cut1 1.0.2
2854 179 2013-06-12 20:23:00 2446 Filter1 1.1.0 2445 cshl_sort_header 0.1
2855 179 2013-06-12 20:23:00 2447 Filter1 1.1.0 2445 cshl_sort_header 0.1
2856 179 2013-06-12 20:23:00 2453 toolshed.g2.bx.psu.edu/repos/aaronquinlan/bedtools/bedtools_intersectbed_bam/0.1.0 0.1.0 2447 Filter1 1.1.0
2857 179 2013-06-12 20:23:00 2451 Cut1 1.0.2 2448 Add_a_column1 1.1.0
2858 179 2013-06-12 20:23:00 2448 Add_a_column1 1.1.0 2449 Add_a_column1 1.1.0
2859 179 2013-06-12 20:23:00 2452 addValue 1.0.0 2450 toolshed.g2.bx.psu.edu/repos/aaronquinlan/bedtools/bedtools_intersectbed_bam/0.1.0 0.1.0
2860 179 2013-06-12 20:23:00 2453 toolshed.g2.bx.psu.edu/repos/aaronquinlan/bedtools/bedtools_intersectbed_bam/0.1.0 0.1.0 2451 Cut1 1.0.2
2861 179 2013-06-12 20:23:00 2443 Cut1 1.0.2 2452 addValue 1.0.0
2862 179 2013-06-12 20:23:00 2442 methtools_filter 0.1.1 2453 toolshed.g2.bx.psu.edu/repos/aaronquinlan/bedtools/bedtools_intersectbed_bam/0.1.0 0.1.0
2863 182 2013-06-15 20:36:00 2507 Add_a_column1 1.1.0 2506 Filter1 1.1.0
2864 182 2013-06-15 20:36:00 2508 cshl_find_and_replace 1.0.0 2507 Add_a_column1 1.1.0
2865 182 2013-06-15 20:36:00 2510 cshl_find_and_replace 1.0.0 2509 cshl_find_and_replace 1.0.0
2866 182 2013-06-15 20:36:00 2511 cshl_find_and_replace 1.0.0 2510 cshl_find_and_replace 1.0.0
2867 182 2013-06-15 20:36:00 2513 cshl_find_and_replace 1.0.0 2512 cshl_find_and_replace 1.0.0
2868 182 2013-06-15 20:36:00 2514 cshl_find_and_replace 1.0.0 2513 cshl_find_and_replace 1.0.0
2869 182 2013-06-15 20:36:00 2516 Add_a_column1 1.1.0 2515 cshl_find_and_replace 1.0.0
2870 182 2013-06-15 20:36:00 2517 Add_a_column1 1.1.0 2516 Add_a_column1 1.1.0
2871 182 2013-06-15 20:36:00 2518 Cut1 1.0.2 2517 Add_a_column1 1.1.0
2872 205 2013-06-21 07:07:00 2665 Add_a_column1 1.1.0 2662 cshl_find_and_replace 1.0.0
2873 205 2013-06-21 07:07:00 2662 cshl_find_and_replace 1.0.0 2663 cshl_find_and_replace 1.0.0
2874 205 2013-06-21 07:07:00 2669 mergeCols1 1.0.1 2666 addValue 1.0.0
2875 205 2013-06-21 07:07:00 2666 addValue 1.0.0 2667 Cut1 1.0.2
2876 205 2013-06-21 07:07:00 2673 Filter1 1.1.0 2671 Cut1 1.0.2
2877 205 2013-06-21 07:07:00 2675 cshl_find_and_replace 1.0.0 2672 Add_a_column1 1.1.0
2878 205 2013-06-21 07:07:00 2672 Add_a_column1 1.1.0 2673 Filter1 1.1.0
2879 205 2013-06-21 07:07:00 2674 cshl_find_and_replace 1.0.0 2675 cshl_find_and_replace 1.0.0
2880 205 2013-06-21 07:07:00 2679 cshl_find_and_replace 1.0.0 2676 cshl_find_and_replace 1.0.0
2881 205 2013-06-21 07:07:00 2676 cshl_find_and_replace 1.0.0 2677 cshl_find_and_replace 1.0.0
2882 205 2013-06-21 07:07:00 2663 cshl_find_and_replace 1.0.0 2678 cshl_find_and_replace 1.0.0
2883 205 2013-06-21 07:07:00 2678 cshl_find_and_replace 1.0.0 2679 cshl_find_and_replace 1.0.0
2884 205 2013-06-21 07:07:00 2671 Cut1 1.0.2 2681
2885 218 2013-06-21 19:40:00 2792 methtools_destrand 0.1.1 2790 cshl_sort_header 0.1
2886 218 2013-06-21 19:40:00 2793 methtools_destrand 0.1.1 2791 cshl_sort_header 0.1
2887 218 2013-06-21 19:40:00 2788 Filter1 1.1.0 2796 methtools_dmr 0.1.1
2888 218 2013-06-21 19:40:00 2789 Filter1 1.1.0 2796 methtools_dmr 0.1.1
2889 218 2013-06-21 19:40:00 2790 cshl_sort_header 0.1 2798
2890 218 2013-06-21 19:40:00 2791 cshl_sort_header 0.1 2799
2891 224 2013-06-22 06:21:00 2851 cshl_sort_header 0.1 2848
2892 224 2013-06-22 06:21:00 2853 methtools_plot 0.1.1 2850
2893 224 2013-06-22 06:21:00 2853 methtools_plot 0.1.1 2851 cshl_sort_header 0.1
2894 224 2013-06-22 06:21:00 2853 methtools_plot 0.1.1 2852 cshl_sort_header 0.1
2895 227 2013-06-22 14:12:00 2858 methtools_destrand 0.1.1 2857 cshl_sort_header 0.1
2896 227 2013-06-22 14:12:00 2857 cshl_sort_header 0.1 2859
2897 241 2013-06-23 20:34:00 2995 cat1 1.0.0 2993 Paste1 1.0.0
2898 241 2013-06-23 20:34:00 2995 cat1 1.0.0 2994 Paste1 1.0.0
2899 241 2013-06-23 20:34:00 3000 toolshed.g2.bx.psu.edu/repos/aaronquinlan/bedtools/bedtools_intersectbed_bam/0.1.0 0.1.0 2999 Filter1 1.1.0
2900 241 2013-06-23 20:34:00 2994 Paste1 1.0.0 3000 toolshed.g2.bx.psu.edu/repos/aaronquinlan/bedtools/bedtools_intersectbed_bam/0.1.0 0.1.0
2901 241 2013-06-23 20:34:00 2994 Paste1 1.0.0 3001 toolshed.g2.bx.psu.edu/repos/aaronquinlan/bedtools/bedtools_intersectbed_bam/0.1.0 0.1.0
2902 241 2013-06-23 20:34:00 3000 toolshed.g2.bx.psu.edu/repos/aaronquinlan/bedtools/bedtools_intersectbed_bam/0.1.0 0.1.0 3001 toolshed.g2.bx.psu.edu/repos/aaronquinlan/bedtools/bedtools_intersectbed_bam/0.1.0 0.1.0
2903 241 2013-06-23 20:34:00 2993 Paste1 1.0.0 3002 toolshed.g2.bx.psu.edu/repos/aaronquinlan/bedtools/bedtools_intersectbed_bam/0.1.0 0.1.0
2904 241 2013-06-23 20:34:00 2993 Paste1 1.0.0 3003 toolshed.g2.bx.psu.edu/repos/aaronquinlan/bedtools/bedtools_intersectbed_bam/0.1.0 0.1.0
2905 241 2013-06-23 20:34:00 2996 Filter1 1.1.0 3004
2906 242 2013-06-24 11:29:00 3035 toolshed.g2.bx.psu.edu/repos/bjoern-gruening/trim_galore/trim_galore/0.2.4.1 3006
2907 242 2013-06-24 11:29:00 3040 bowtie2 3010
2908 242 2013-06-24 11:29:00 3041 toolshed.g2.bx.psu.edu/repos/bjoern-gruening/trim_galore/trim_galore/0.2.4.1 3010
2909 242 2013-06-24 11:29:00 3043 toolshed.g2.bx.psu.edu/repos/bjoern-gruening/trim_galore/trim_galore/0.2.4.1 3011
2910 242 2013-06-24 11:29:00 3046 toolshed.g2.bx.psu.edu/repos/bjoern-gruening/trim_galore/trim_galore/0.2.4.1 3013
2911 242 2013-06-24 11:29:00 3047 bowtie2 3014
2912 242 2013-06-24 11:29:00 3048 toolshed.g2.bx.psu.edu/repos/bjoern-gruening/trim_galore/trim_galore/0.2.4.1 3014
2913 242 2013-06-24 11:29:00 3049 toolshed.g2.bx.psu.edu/repos/bjoern-gruening/trim_galore/trim_galore/0.2.4.1 3015
2914 242 2013-06-24 11:29:00 3050 bowtie2 3016
2915 242 2013-06-24 11:29:00 3051 toolshed.g2.bx.psu.edu/repos/bjoern-gruening/trim_galore/trim_galore/0.2.4.1 3016
2916 242 2013-06-24 11:29:00 3052 toolshed.g2.bx.psu.edu/repos/bjoern-gruening/trim_galore/trim_galore/0.2.4.1 3017
2917 242 2013-06-24 11:29:00 3055 toolshed.g2.bx.psu.edu/repos/bjoern-gruening/trim_galore/trim_galore/0.2.4.1 3019
2918 242 2013-06-24 11:29:00 3056 toolshed.g2.bx.psu.edu/repos/bjoern-gruening/trim_galore/trim_galore/0.2.4.1 3027
2919 242 2013-06-24 11:29:00 3059 toolshed.g2.bx.psu.edu/repos/bjoern-gruening/trim_galore/trim_galore/0.2.4.1 3030
2920 242 2013-06-24 11:29:00 3061 toolshed.g2.bx.psu.edu/repos/bjoern-gruening/trim_galore/trim_galore/0.2.4.1 3032
2921 242 2013-06-24 11:29:00 3062 toolshed.g2.bx.psu.edu/repos/bjoern-gruening/trim_galore/trim_galore/0.2.4.1 3033
2922 242 2013-06-24 11:29:00 3063 samtools_rmdup 3034 bowtie2
2923 242 2013-06-24 11:29:00 3064 bowtie2 3035 toolshed.g2.bx.psu.edu/repos/bjoern-gruening/trim_galore/trim_galore/0.2.4.1
2924 242 2013-06-24 11:29:00 3065 bowtie2 3037 toolshed.g2.bx.psu.edu/repos/bjoern-gruening/trim_galore/trim_galore/0.2.4.1
2925 242 2013-06-24 11:29:00 3066 bowtie2 3038 toolshed.g2.bx.psu.edu/repos/bjoern-gruening/trim_galore/trim_galore/0.2.4.1
2926 242 2013-06-24 11:29:00 3068 bowtie2 3041 toolshed.g2.bx.psu.edu/repos/bjoern-gruening/trim_galore/trim_galore/0.2.4.1
2927 242 2013-06-24 11:29:00 3071 bowtie2 3045 toolshed.g2.bx.psu.edu/repos/bjoern-gruening/trim_galore/trim_galore/0.2.4.1
2928 242 2013-06-24 11:29:00 3073 bowtie2 3048 toolshed.g2.bx.psu.edu/repos/bjoern-gruening/trim_galore/trim_galore/0.2.4.1
2929 242 2013-06-24 11:29:00 3075 bowtie2 3051 toolshed.g2.bx.psu.edu/repos/bjoern-gruening/trim_galore/trim_galore/0.2.4.1
2930 242 2013-06-24 11:29:00 3076 bowtie2 3052 toolshed.g2.bx.psu.edu/repos/bjoern-gruening/trim_galore/trim_galore/0.2.4.1
2931 242 2013-06-24 11:29:00 3078 bowtie2 3054 toolshed.g2.bx.psu.edu/repos/bjoern-gruening/trim_galore/trim_galore/0.2.4.1
2932 242 2013-06-24 11:29:00 3079 bowtie2 3055 toolshed.g2.bx.psu.edu/repos/bjoern-gruening/trim_galore/trim_galore/0.2.4.1
2933 242 2013-06-24 11:29:00 3080 bowtie2 3056 toolshed.g2.bx.psu.edu/repos/bjoern-gruening/trim_galore/trim_galore/0.2.4.1
2934 242 2013-06-24 11:29:00 3083 bowtie2 3059 toolshed.g2.bx.psu.edu/repos/bjoern-gruening/trim_galore/trim_galore/0.2.4.1
2935 242 2013-06-24 11:29:00 3084 bowtie2 3060 toolshed.g2.bx.psu.edu/repos/bjoern-gruening/trim_galore/trim_galore/0.2.4.1
2936 242 2013-06-24 11:29:00 3086 bowtie2 3062 toolshed.g2.bx.psu.edu/repos/bjoern-gruening/trim_galore/trim_galore/0.2.4.1
2937 242 2013-06-24 11:29:00 3087 samtools_rmdup 3064 bowtie2
2938 242 2013-06-24 11:29:00 3088 samtools_rmdup 3065 bowtie2
2939 242 2013-06-24 11:29:00 3089 samtools_rmdup 3066 bowtie2
2940 242 2013-06-24 11:29:00 3090 samtools_rmdup 3067 bowtie2
2941 242 2013-06-24 11:29:00 3092 samtools_rmdup 3069 bowtie2
2942 242 2013-06-24 11:29:00 3093 samtools_rmdup 3070 bowtie2
2943 242 2013-06-24 11:29:00 3096 samtools_rmdup 3073 bowtie2
2944 242 2013-06-24 11:29:00 3098 samtools_rmdup 3075 bowtie2
2945 242 2013-06-24 11:29:00 3099 samtools_rmdup 3076 bowtie2
2946 242 2013-06-24 11:29:00 3103 samtools_rmdup 3081 bowtie2
2947 242 2013-06-24 11:29:00 3104 samtools_rmdup 3082 bowtie2
2948 242 2013-06-24 11:29:00 3105 samtools_rmdup 3083 bowtie2
2949 242 2013-06-24 11:29:00 3107 samtools_rmdup 3085 bowtie2
2950 242 2013-06-24 11:29:00 3113 sam_merge2 3096 samtools_rmdup
2951 242 2013-06-24 11:29:00 3113 sam_merge2 3097 samtools_rmdup
2952 242 2013-06-24 11:29:00 3115 sam_merge2 3100 samtools_rmdup
2953 242 2013-06-24 11:29:00 3115 sam_merge2 3101 samtools_rmdup
2954 242 2013-06-24 11:29:00 3116 sam_merge2 3102 samtools_rmdup
2955 242 2013-06-24 11:29:00 3116 sam_merge2 3103 samtools_rmdup
2956 242 2013-06-24 11:29:00 3117 bam2wig 3104 samtools_rmdup
2957 242 2013-06-24 11:29:00 3118 sam_merge2 3105 samtools_rmdup
2958 242 2013-06-24 11:29:00 3118 sam_merge2 3106 samtools_rmdup
2959 242 2013-06-24 11:29:00 3119 sam_merge2 3107 samtools_rmdup
2960 242 2013-06-24 11:29:00 3119 sam_merge2 3108 samtools_rmdup
2961 242 2013-06-24 11:29:00 3120 bam2wig 3109 sam_merge2
2962 242 2013-06-24 11:29:00 3121 bam2wig 3110 sam_merge2
2963 242 2013-06-24 11:29:00 3123 bam2wig 3112 sam_merge2
2964 242 2013-06-24 11:29:00 3127 bam2wig 3116 sam_merge2
2965 242 2013-06-24 11:29:00 3128 bam2wig 3118 sam_merge2
2966 243 2013-06-27 14:03:00 3133 samtools_rmdup 3132 bowtie2
2967 252 2013-06-27 09:40:00 3190 Cut1 1.0.2 3191 Add_a_column1 1.1.0
2968 253 2013-06-27 14:24:00 3195 get_flanks1 3194
2969 264 2013-07-31 09:27:00 3279 sam_merge2 1.1.2 3276 samtools_rmdup 1.0.0
2970 264 2013-07-31 09:27:00 3279 sam_merge2 1.1.2 3277 samtools_rmdup 1.0.0
2971 264 2013-07-31 09:27:00 3272 toolshed.g2.bx.psu.edu/repos/bjoern-gruening/trim_galore/trim_galore/0.2.4.1 0.2.4.1 3280
2972 278 2013-06-30 21:55:00 3369 samtools_rmdup 1.0.0 3370 bismark_bowtie 0.7.12
2973 281 2013-07-01 13:45:00 3380 Filter1 3379 Convert characters1
2974 281 2013-07-01 13:45:00 3381 Add_a_column1 3380 Filter1
2975 281 2013-07-01 13:45:00 3382 Add_a_column1 3381 Add_a_column1
2976 292 2013-07-03 17:45:00 3464 toolshed.g2.bx.psu.edu/repos/bjoern-gruening/trim_galore/trim_galore/0.2.4.1 3443
2977 292 2013-07-03 17:45:00 3464 toolshed.g2.bx.psu.edu/repos/bjoern-gruening/trim_galore/trim_galore/0.2.4.1 3444
2978 292 2013-07-03 17:45:00 3465 toolshed.g2.bx.psu.edu/repos/bjoern-gruening/trim_galore/trim_galore/0.2.4.1 3445
2979 292 2013-07-03 17:45:00 3465 toolshed.g2.bx.psu.edu/repos/bjoern-gruening/trim_galore/trim_galore/0.2.4.1 3446
2980 292 2013-07-03 17:45:00 3466 toolshed.g2.bx.psu.edu/repos/bjoern-gruening/trim_galore/trim_galore/0.2.4.1 3447
2981 292 2013-07-03 17:45:00 3466 toolshed.g2.bx.psu.edu/repos/bjoern-gruening/trim_galore/trim_galore/0.2.4.1 3448
2982 292 2013-07-03 17:45:00 3467 toolshed.g2.bx.psu.edu/repos/bjoern-gruening/trim_galore/trim_galore/0.2.4.1 3449
2983 292 2013-07-03 17:45:00 3467 toolshed.g2.bx.psu.edu/repos/bjoern-gruening/trim_galore/trim_galore/0.2.4.1 3450
2984 292 2013-07-03 17:45:00 3468 toolshed.g2.bx.psu.edu/repos/bjoern-gruening/trim_galore/trim_galore/0.2.4.1 3451
2985 292 2013-07-03 17:45:00 3468 toolshed.g2.bx.psu.edu/repos/bjoern-gruening/trim_galore/trim_galore/0.2.4.1 3452
2986 292 2013-07-03 17:45:00 3469 toolshed.g2.bx.psu.edu/repos/bjoern-gruening/trim_galore/trim_galore/0.2.4.1 3453
2987 292 2013-07-03 17:45:00 3469 toolshed.g2.bx.psu.edu/repos/bjoern-gruening/trim_galore/trim_galore/0.2.4.1 3455
2988 292 2013-07-03 17:45:00 3471 toolshed.g2.bx.psu.edu/repos/bjoern-gruening/trim_galore/trim_galore/0.2.4.1 3457
2989 292 2013-07-03 17:45:00 3471 toolshed.g2.bx.psu.edu/repos/bjoern-gruening/trim_galore/trim_galore/0.2.4.1 3458
2990 292 2013-07-03 17:45:00 3472 toolshed.g2.bx.psu.edu/repos/bjoern-gruening/trim_galore/trim_galore/0.2.4.1 3459
2991 292 2013-07-03 17:45:00 3472 toolshed.g2.bx.psu.edu/repos/bjoern-gruening/trim_galore/trim_galore/0.2.4.1 3460
2992 292 2013-07-03 17:45:00 3479 tophat2 3463
2993 292 2013-07-03 17:45:00 3476 tophat2 3463
2994 292 2013-07-03 17:45:00 3482 tophat2 3463
2995 292 2013-07-03 17:45:00 3477 tophat2 3463
2996 292 2013-07-03 17:45:00 3491 cufflinks 3463
2997 292 2013-07-03 17:45:00 3492 cufflinks 3463
2998 292 2013-07-03 17:45:00 3493 cufflinks 3463
2999 292 2013-07-03 17:45:00 3485 cufflinks 3463
3000 292 2013-07-03 17:45:00 3486 cufflinks 3463
3001 292 2013-07-03 17:45:00 3494 cufflinks 3463
3002 292 2013-07-03 17:45:00 3487 cufflinks 3463
3003 292 2013-07-03 17:45:00 3496 cuffmerge 3463
3004 292 2013-07-03 17:45:00 3476 tophat2 3466 toolshed.g2.bx.psu.edu/repos/bjoern-gruening/trim_galore/trim_galore/0.2.4.1
3005 292 2013-07-03 17:45:00 3476 tophat2 3466 toolshed.g2.bx.psu.edu/repos/bjoern-gruening/trim_galore/trim_galore/0.2.4.1
3006 292 2013-07-03 17:45:00 3477 tophat2 3467 toolshed.g2.bx.psu.edu/repos/bjoern-gruening/trim_galore/trim_galore/0.2.4.1
3007 292 2013-07-03 17:45:00 3477 tophat2 3467 toolshed.g2.bx.psu.edu/repos/bjoern-gruening/trim_galore/trim_galore/0.2.4.1
3008 292 2013-07-03 17:45:00 3479 tophat2 3469 toolshed.g2.bx.psu.edu/repos/bjoern-gruening/trim_galore/trim_galore/0.2.4.1
3009 292 2013-07-03 17:45:00 3479 tophat2 3469 toolshed.g2.bx.psu.edu/repos/bjoern-gruening/trim_galore/trim_galore/0.2.4.1
3010 292 2013-07-03 17:45:00 3482 tophat2 3472 toolshed.g2.bx.psu.edu/repos/bjoern-gruening/trim_galore/trim_galore/0.2.4.1
3011 292 2013-07-03 17:45:00 3482 tophat2 3472 toolshed.g2.bx.psu.edu/repos/bjoern-gruening/trim_galore/trim_galore/0.2.4.1
3012 292 2013-07-03 17:45:00 3485 cufflinks 3475 tophat2
3013 292 2013-07-03 17:45:00 3486 cufflinks 3476 tophat2
3014 292 2013-07-03 17:45:00 3487 cufflinks 3477 tophat2
3015 292 2013-07-03 17:45:00 3489 bam2wig 3478 tophat2
3016 292 2013-07-03 17:45:00 3490 bam2wig 3478 tophat2
3017 292 2013-07-03 17:45:00 3491 cufflinks 3479 tophat2
3018 292 2013-07-03 17:45:00 3492 cufflinks 3480 tophat2
3019 292 2013-07-03 17:45:00 3493 cufflinks 3481 tophat2
3020 292 2013-07-03 17:45:00 3494 cufflinks 3482 tophat2
3021 292 2013-07-03 17:45:00 3496 cuffmerge 3484 cufflinks
3022 292 2013-07-03 17:45:00 3496 cuffmerge 3485 cufflinks
3023 292 2013-07-03 17:45:00 3496 cuffmerge 3486 cufflinks
3024 292 2013-07-03 17:45:00 3496 cuffmerge 3487 cufflinks
3025 292 2013-07-03 17:45:00 3496 cuffmerge 3488 cufflinks
3026 292 2013-07-03 17:45:00 3496 cuffmerge 3491 cufflinks
3027 292 2013-07-03 17:45:00 3496 cuffmerge 3492 cufflinks
3028 292 2013-07-03 17:45:00 3496 cuffmerge 3493 cufflinks
3029 292 2013-07-03 17:45:00 3496 cuffmerge 3494 cufflinks
3030 292 2013-07-03 17:45:00 3496 cuffmerge 3495 cufflinks
3031 295 2013-07-03 17:52:00 3524 toolshed.g2.bx.psu.edu/repos/bjoern-gruening/trim_galore/trim_galore/0.2.4.1 0.2.4.1 3522
3032 295 2013-07-03 17:52:00 3524 toolshed.g2.bx.psu.edu/repos/bjoern-gruening/trim_galore/trim_galore/0.2.4.1 0.2.4.1 3523
3033 295 2013-07-03 17:52:00 3525 tophat2 0.5 3524 toolshed.g2.bx.psu.edu/repos/bjoern-gruening/trim_galore/trim_galore/0.2.4.1 0.2.4.1
3034 295 2013-07-03 17:52:00 3525 tophat2 0.5 3524 toolshed.g2.bx.psu.edu/repos/bjoern-gruening/trim_galore/trim_galore/0.2.4.1 0.2.4.1
3035 296 2013-07-03 17:55:00 3528 toolshed.g2.bx.psu.edu/repos/bjoern-gruening/trim_galore/trim_galore/0.2.4.1 0.2.4.1 3527
3036 296 2013-07-03 17:55:00 3530 cufflinks 0.0.5 3529 tophat2 0.5
3037 300 2013-07-03 19:48:00 3547 mergeCols1 1.0.1 3546 addValue 1.0.0
3038 300 2013-07-03 19:48:00 3548 cshl_awk_replace_in_column 1.0.0 3547 mergeCols1 1.0.1
3039 300 2013-07-03 19:48:00 3549 cshl_awk_replace_in_column 1.0.0 3548 cshl_awk_replace_in_column 1.0.0
3040 300 2013-07-03 19:48:00 3550 Add_a_column1 1.1.0 3549 cshl_awk_replace_in_column 1.0.0
3041 300 2013-07-03 19:48:00 3551 Cut1 1.0.2 3550 Add_a_column1 1.1.0
3042 314 2013-07-05 09:46:00 3641 Cut1 1.0.2 3639 Add_a_column1 1.1.0
3043 314 2013-07-05 09:46:00 3640 wig_to_bigWig 1.1.0 3641 Cut1 1.0.2
3044 327 2013-07-10 07:51:00 3753 Summary_Statistics1 1.1.0 3755 Filter1 1.1.0
3045 328 2013-07-10 08:24:00 3760 Filter1 1.1.0 3758 Filter1 1.1.0
3046 328 2013-07-10 08:24:00 3761 Filter1 1.1.0 3759 Filter1 1.1.0
3047 328 2013-07-10 08:24:00 3762 toolshed.g2.bx.psu.edu/repos/aaronquinlan/bedtools/bedtools_intersectbed_bam/0.1.0 0.1.0 3760 Filter1 1.1.0
3048 328 2013-07-10 08:24:00 3759 Filter1 1.1.0 3764
3049 328 2013-07-10 08:24:00 3762 toolshed.g2.bx.psu.edu/repos/aaronquinlan/bedtools/bedtools_intersectbed_bam/0.1.0 0.1.0 3765
3050 334 2013-07-10 09:39:00 3801 Cut1 1.0.2 3799 Add_a_column1 1.1.0
3051 334 2013-07-10 09:39:00 3806 Filter1 1.1.0 3803 cat1 1.0.0
3052 334 2013-07-10 09:39:00 3798 Filter1 1.1.0 3807
3053 355 2013-07-15 13:11:00 4004 Cut1 1.0.2 4002 addValue 1.0.0
3054 355 2013-07-15 13:11:00 4003 heatmapper 1.3 4004 Cut1 1.0.2
3055 355 2013-07-15 13:11:00 4005 heatmapper 1.3 4004 Cut1 1.0.2
3056 355 2013-07-15 13:11:00 4005 heatmapper 1.3 4004 Cut1 1.0.2
3057 355 2013-07-15 13:11:00 4006 heatmapper 1.3 4004 Cut1 1.0.2
3058 355 2013-07-15 13:11:00 4002 addValue 1.0.0 4008
3059 355 2013-07-15 13:11:00 4003 heatmapper 1.3 4009
3060 355 2013-07-15 13:11:00 4005 heatmapper 1.3 4010
3061 355 2013-07-15 13:11:00 4006 heatmapper 1.3 4011
3062 358 2013-07-17 13:29:00 4028 toolshed.g2.bx.psu.edu/repos/aaronquinlan/bedtools/bedtools_intersectbed_bam/0.1.0 0.1.0 4032
3063 358 2013-07-17 13:29:00 4027 toolshed.g2.bx.psu.edu/repos/aaronquinlan/bedtools/bedtools_intersectbed_bam/0.1.0 0.1.0 4033
3064 358 2013-07-17 13:29:00 4029 toolshed.g2.bx.psu.edu/repos/aaronquinlan/bedtools/bedtools_intersectbed_bam/0.1.0 0.1.0 4033
3065 358 2013-07-17 13:29:00 4027 toolshed.g2.bx.psu.edu/repos/aaronquinlan/bedtools/bedtools_intersectbed_bam/0.1.0 0.1.0 4034
3066 358 2013-07-17 13:29:00 4028 toolshed.g2.bx.psu.edu/repos/aaronquinlan/bedtools/bedtools_intersectbed_bam/0.1.0 0.1.0 4034
3067 358 2013-07-17 13:29:00 4031 toolshed.g2.bx.psu.edu/repos/aaronquinlan/bedtools/bedtools_intersectbed_bam/0.1.0 0.1.0 4034
3068 358 2013-07-17 13:29:00 4029 toolshed.g2.bx.psu.edu/repos/aaronquinlan/bedtools/bedtools_intersectbed_bam/0.1.0 0.1.0 4035
3069 358 2013-07-17 13:29:00 4031 toolshed.g2.bx.psu.edu/repos/aaronquinlan/bedtools/bedtools_intersectbed_bam/0.1.0 0.1.0 4035
3070 359 2013-07-18 15:24:00 4039 bam2wig 1.3 4037 samtools_rmdup 1.0.0
3071 359 2013-07-18 15:24:00 4037 samtools_rmdup 1.0.0 4038 bowtie2 0.1
3072 359 2013-07-18 15:24:00 4036 toolshed.g2.bx.psu.edu/repos/bjoern-gruening/trim_galore/trim_galore/0.2.4.1 0.2.4.1 4040
3073 371 2013-07-24 20:44:00 4179 wig_to_bigWig 1.1.0 4186 Filter1 1.1.0
3074 371 2013-07-24 20:44:00 4174 wig_to_bigWig 1.1.0 4187 Filter1 1.1.0
3075 371 2013-07-24 20:44:00 4180 wig_to_bigWig 1.1.0 4189 Filter1 1.1.0
3076 371 2013-07-24 20:44:00 4181 wig_to_bigWig 1.1.0 4193 Filter1 1.1.0
3077 371 2013-07-24 20:44:00 4202 wig_to_bigWig 1.1.0 4195 Filter1 1.1.0
3078 371 2013-07-24 20:44:00 4207 wig_to_bigWig 1.1.0 4196 Filter1 1.1.0
3079 371 2013-07-24 20:44:00 4206 wig_to_bigWig 1.1.0 4198 Filter1 1.1.0
3080 371 2013-07-24 20:44:00 4182 wig_to_bigWig 1.1.0 4199 Filter1 1.1.0
3081 371 2013-07-24 20:44:00 4204 wig_to_bigWig 1.1.0 4200 Filter1 1.1.0
3082 371 2013-07-24 20:44:00 4205 wig_to_bigWig 1.1.0 4201 Filter1 1.1.0
3083 371 2013-07-24 20:44:00 4176 Filter1 1.1.0 4210
3084 371 2013-07-24 20:44:00 4183 Filter1 1.1.0 4210
3085 371 2013-07-24 20:44:00 4185 Filter1 1.1.0 4210
3086 371 2013-07-24 20:44:00 4186 Filter1 1.1.0 4210
3087 371 2013-07-24 20:44:00 4187 Filter1 1.1.0 4210
3088 371 2013-07-24 20:44:00 4189 Filter1 1.1.0 4210
3089 371 2013-07-24 20:44:00 4190 Filter1 1.1.0 4210
3090 371 2013-07-24 20:44:00 4192 Filter1 1.1.0 4210
3091 371 2013-07-24 20:44:00 4193 Filter1 1.1.0 4210
3092 371 2013-07-24 20:44:00 4194 Filter1 1.1.0 4210
3093 371 2013-07-24 20:44:00 4195 Filter1 1.1.0 4210
3094 371 2013-07-24 20:44:00 4196 Filter1 1.1.0 4210
3095 371 2013-07-24 20:44:00 4197 Filter1 1.1.0 4210
3096 371 2013-07-24 20:44:00 4198 Filter1 1.1.0 4210
3097 371 2013-07-24 20:44:00 4199 Filter1 1.1.0 4210
3098 371 2013-07-24 20:44:00 4201 Filter1 1.1.0 4210
3099 375 2013-07-26 14:02:00 4288 heatmapper 1.3 4300
3100 375 2013-07-26 14:02:00 4292 heatmapper 1.3 4300
3101 375 2013-07-26 14:02:00 4298 heatmapper 1.3 4300
3102 375 2013-07-26 14:02:00 4288 heatmapper 1.3 4301
3103 375 2013-07-26 14:02:00 4292 heatmapper 1.3 4305
3104 375 2013-07-26 14:02:00 4298 heatmapper 1.3 4311
3105 380 2013-07-31 09:32:00 4346 bowtie2 0.1 4347 toolshed.g2.bx.psu.edu/repos/bjoern-gruening/trim_galore/trim_galore/0.2.4.1 0.2.4.1
3106 380 2013-07-31 09:32:00 4347 toolshed.g2.bx.psu.edu/repos/bjoern-gruening/trim_galore/trim_galore/0.2.4.1 0.2.4.1 4350
3107 380 2013-07-31 09:32:00 4347 toolshed.g2.bx.psu.edu/repos/bjoern-gruening/trim_galore/trim_galore/0.2.4.1 0.2.4.1 4351
3108 385 2013-07-31 19:25:00 4371 toolshed.g2.bx.psu.edu/repos/ryo-tas/macs14/peakcalling_macs14/1.4.1 1.4.1 4372
3109 385 2013-07-31 19:25:00 4371 toolshed.g2.bx.psu.edu/repos/ryo-tas/macs14/peakcalling_macs14/1.4.1 1.4.1 4373
3110 392 2013-07-31 20:28:00 4425 Summary_Statistics1 1.1.0 4427 Filter1 1.1.0
3111 392 2013-07-31 20:28:00 4424 Summary_Statistics1 1.1.0 4428 Filter1 1.1.0
3112 392 2013-07-31 20:28:00 4429 addValue 1.0.0 4428 Filter1 1.1.0
3113 392 2013-07-31 20:28:00 4431 Cut1 1.0.2 4430 mergeCols1 1.0.1
3114 392 2013-07-31 20:28:00 4433 mergeCols1 1.0.1 4432 addValue 1.0.0
3115 392 2013-07-31 20:28:00 4422 Cut1 1.0.2 4433 mergeCols1 1.0.1
3116 392 2013-07-31 20:28:00 4426 addValue 1.0.0 4435
3117 392 2013-07-31 20:28:00 4427 Filter1 1.1.0 4435
3118 392 2013-07-31 20:28:00 4428 Filter1 1.1.0 4435
3119 394 2013-08-01 09:49:00 4446 toolshed.g2.bx.psu.edu/repos/aaronquinlan/bedtools/bedtools_intersectbed_bam/0.1.0 0.1.0 4449
3120 394 2013-08-01 09:49:00 4446 toolshed.g2.bx.psu.edu/repos/aaronquinlan/bedtools/bedtools_intersectbed_bam/0.1.0 0.1.0 4451
3121 397 2013-08-01 21:11:00 4472 methtools_filter 0.1.1 4469 toolshed.g2.bx.psu.edu/repos/aaronquinlan/bedtools/bedtools_intersectbed_bam/0.1.0 0.1.0
3122 397 2013-08-01 21:11:00 4472 methtools_filter 0.1.1 4470 toolshed.g2.bx.psu.edu/repos/aaronquinlan/bedtools/bedtools_intersectbed_bam/0.1.0 0.1.0
3123 397 2013-08-01 21:11:00 4471 methtools_dmr 0.1.1 4472 methtools_filter 0.1.1
3124 397 2013-08-01 21:11:00 4471 methtools_dmr 0.1.1 4472 methtools_filter 0.1.1
3125 397 2013-08-01 21:11:00 4468 toolshed.g2.bx.psu.edu/repos/aaronquinlan/bedtools/bedtools_intersectbed_bam/0.1.0 0.1.0 4474 smooth_running_window 0.1
3126 397 2013-08-01 21:11:00 4468 toolshed.g2.bx.psu.edu/repos/aaronquinlan/bedtools/bedtools_intersectbed_bam/0.1.0 0.1.0 4475