Mercurial > repos > bgruening > data_manager_sylph_database

diff data_manager_conf.xml @ 0:130224fe2d18 draft default tip

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planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/data_managers/data_manager_sylph_database commit 6ac2834ca0a21512c9986e2fb8d0dcda1c4b0e18
author bgruening
date Fri, 23 May 2025 09:48:30 +0000
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--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/data_manager_conf.xml	Fri May 23 09:48:30 2025 +0000
@@ -0,0 +1,22 @@
+<?xml version="1.0"?>
+<data_managers>
+    <data_manager tool_file="data_manager/data_manager_sylph_database.xml" id="data_manager_sylph_database">
+        <data_table name="sylph_databases">  <!-- Defines a Data Table to be modified. -->
+            <output> <!-- Handle the output of the Data Manager Tool -->
+                <column name="value"/>  <!-- columns that are going to be specified by the Data Manager Tool -->
+                <column name="name"/>  <!-- columns that are going to be specified by the Data Manager Tool -->
+                <column name="path" output_ref="out_file">
+                    <move type="file">
+                        <source>${path}</source>
+                        <target base="${GALAXY_DATA_MANAGER_DATA_PATH}">sylph/${path}</target>
+                    </move>
+                    <value_translation>${GALAXY_DATA_MANAGER_DATA_PATH}/sylph/${path}</value_translation>
+                    <value_translation type="function">abspath</value_translation>
+                </column>
+                <column name="clade"/>
+                <column name="sylph_tax_identifier"/>
+                <column name="version"/>
+            </output>
+        </data_table>
+    </data_manager>
+</data_managers>
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