Mercurial > repos > bgruening > deeptools_compute_matrix

diff computeMatrix.xml @ 10:6f334c8bd52f draft

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planemo upload for repository https://github.com/fidelram/deepTools/tree/master/galaxy/wrapper/ commit 0eeb2e1a184186ba5ac044136e71b943e2af0f09
author bgruening
date Mon, 05 Dec 2016 08:12:43 -0500
parents aee77c22123d
children babca70c3586
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--- a/computeMatrix.xml	Tue Oct 25 19:32:40 2016 -0400
+++ b/computeMatrix.xml	Mon Dec 05 08:12:43 2016 -0500
@@ -87,7 +87,7 @@
     <inputs>
 
         <repeat name="regionsFiles" title="Select regions" min="1">
-            <param name="regionsFile" format="bed" type="data" label="Regions to plot"
+            <param name="regionsFile" format="bed,gtf" type="data" label="Regions to plot"
                 help="File, in BED format, containing the regions to plot."/>
         </repeat>
 
@@ -172,7 +172,7 @@
                     label="Length, in bases, of non-overlapping bins used for averaging the score over the regions length"
                     help="(--binSize)"/>
 
-                <expand macro="sortRegions" />
+                <expand macro="sortRegionsComputeMatrix" />
                 <expand macro="sortUsing" />
 
                 <param name="averageTypeBins" type="select"