Mercurial > repos > bgruening > deeptools_estimatereadfiltering
changeset 6:f2bf36c2a22b draft
planemo upload for repository https://github.com/deeptools/deepTools/tree/master/galaxy/wrapper/ commit 3cefc7d64faa53ef9a4e5984c7b275fc47cbdaaf
| author | bgruening |
|---|---|
| date | Wed, 20 Feb 2019 08:05:25 -0500 |
| parents | 45fff5442001 |
| children | d24c1f35b1a1 |
| files | deepTools_macros.xml test-data/estimateReadFiltering.txt |
| diffstat | 2 files changed, 4 insertions(+), 4 deletions(-) [+] |
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--- a/deepTools_macros.xml Tue Feb 19 10:07:36 2019 -0500 +++ b/deepTools_macros.xml Wed Feb 20 08:05:25 2019 -0500 @@ -512,7 +512,7 @@ <token name="@multiple_input_bigwigs@"> <![CDATA[ - #if $custom_labels_conditional.custom_labels_select == "Yes": + #if $custom_sample_labels_conditional.custom_labels_select == "Yes": #set custom_labels=labels #end if #set files=[] @@ -533,7 +533,7 @@ #silent $labels.append("'%s'" % $identifier) #end for #end if - #if $custom_labels_conditional.custom_labels_select == "Yes": + #if $custom_sample_labels_conditional.custom_labels_select == "Yes": #set labels=custom_labels #end if ]]>
--- a/test-data/estimateReadFiltering.txt Tue Feb 19 10:07:36 2019 -0500 +++ b/test-data/estimateReadFiltering.txt Wed Feb 20 08:05:25 2019 -0500 @@ -1,3 +1,3 @@ Sample Total Reads Mapped Reads Alignments in blacklisted regions Estimated mapped reads filtered Below MAPQ Missing Flags Excluded Flags Internally-determined Duplicates Marked Duplicates Singletons Wrong strand -paired_chr2L.bam 12644 12589 0 1395.9 4149.0 0.0 0.0 0.0 0.0 55.0 0.0 -paired_chr2L.bam 12644 12589 0 1395.9 4149.0 0.0 0.0 0.0 0.0 55.0 0.0 +paired_chr2L.bam 12644 12589 0 4192.0 4149.0 0.0 0.0 0.0 0.0 55.0 0.0 +paired_chr2L.bam 12644 12589 0 4192.0 4149.0 0.0 0.0 0.0 0.0 55.0 0.0