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1 {
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2 "a_galaxy_workflow": "true",
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3 "annotation": "",
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4 "format-version": "0.1",
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6 "steps": {
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12 {
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13 "description": "",
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14 "name": "any column-based file of genomic intervals"
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15 }
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16 ],
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17 "name": "Input dataset",
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18 "outputs": [],
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19 "position": {
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22 },
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27 "type": "data_input",
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28 "user_outputs": []
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29 },
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30 "1": {
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31 "annotation": "",
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33 "input_connections": {
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37 }
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38 },
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39 "inputs": [],
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40 "name": "Trim",
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41 "outputs": [
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42 {
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43 "name": "out_file1",
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44 "type": "input"
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52 "RenameDatasetActionout_file1": {
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53 "action_arguments": {
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54 "newname": "removed \"chr\""
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55 },
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56 "action_type": "RenameDatasetAction",
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57 "output_name": "out_file1"
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58 }
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59 },
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60 "tool_errors": null,
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61 "tool_id": "trimmer",
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62 "tool_state": "{\"__page__\": 0, \"input1\": \"null\", \"end\": \"\\\"0\\\"\", \"fastq\": \"\\\"\\\"\", \"ignore\": \"\\\"35\\\"\", \"start\": \"\\\"4\\\"\", \"__rerun_remap_job_id__\": null, \"chromInfo\": \"\\\"/data2/galaxy/galaxy-dist/tool-data/shared/ucsc/chrom/mm9.len\\\"\", \"col\": \"\\\"1\\\"\"}",
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63 "tool_version": "0.0.1",
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64 "type": "tool",
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65 "user_outputs": []
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66 }
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67 }
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68 } |
