Mercurial > repos > bgruening > diamond

annotate test-data/diamond_log.txt @ 12:60f307965815 draft default tip

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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/diamond commit 62db819c1db857d3fba94dc4e290ee0f50f7928d
author iuc
date Mon, 03 Feb 2025 16:01:01 +0000
parents
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Ignore whitespace changes - Everywhere: Within whitespace: At end of lines:
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12
60f307965815 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/diamond commit 62db819c1db857d3fba94dc4e290ee0f50f7928d
iuc
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diff changeset
1 diamond blastx --quiet --threads 1 --db ./database --query /tmp/tmpb7mnrgbk/files/0/b/a/dataset_0bafd694-5276-4809-9258-1d272c89c442.dat --query-gencode 1 --strand both --min-orf 1 --outfmt 6 qseqid sseqid pident length mismatch gapopen qstart qend sstart send evalue bitscore --out /tmp/tmpb7mnrgbk/job_working_directory/000/34/outputs/dataset_9356bfe1-71ff-4289-b524-b07b2006b561.dat --compress 0 --algo 0 --matrix BLOSUM62 --comp-based-stats 1 --masking 1 --max-target-seqs 25 --evalue 0.001 --id 0 --query-cover 0 --subject-cover 0 --block-size 2.0 --motif-masking 0 --soft-masking 0 --index-chunks 4 --file-buffer-size 67108864 --log
60f307965815 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/diamond commit 62db819c1db857d3fba94dc4e290ee0f50f7928d
iuc
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2 #CPU threads: 1
60f307965815 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/diamond commit 62db819c1db857d3fba94dc4e290ee0f50f7928d
iuc
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3 Scoring parameters: (Matrix=BLOSUM62 Lambda=0.267 K=0.041 Penalties=11/1)
60f307965815 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/diamond commit 62db819c1db857d3fba94dc4e290ee0f50f7928d
iuc
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4 CPU features detected: ssse3 popcnt sse4.1 avx2
60f307965815 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/diamond commit 62db819c1db857d3fba94dc4e290ee0f50f7928d
iuc
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5 L3 cache size: 12582912
60f307965815 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/diamond commit 62db819c1db857d3fba94dc4e290ee0f50f7928d
iuc
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6 MAX_SHAPE_LEN=19 SEQ_MASK STRICT_BAND
60f307965815 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/diamond commit 62db819c1db857d3fba94dc4e290ee0f50f7928d
iuc
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7 Temporary directory: /tmp/tmpb7mnrgbk/job_working_directory/000/34/outputs
60f307965815 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/diamond commit 62db819c1db857d3fba94dc4e290ee0f50f7928d
iuc
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8 #Target sequences to report alignments for: 25
60f307965815 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/diamond commit 62db819c1db857d3fba94dc4e290ee0f50f7928d
iuc
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9 DP fields: 510
60f307965815 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/diamond commit 62db819c1db857d3fba94dc4e290ee0f50f7928d
iuc
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10 Opening the database... [0s]
60f307965815 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/diamond commit 62db819c1db857d3fba94dc4e290ee0f50f7928d
iuc
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11 Database: ./database (type: Diamond database, sequences: 2, letters: 568)
60f307965815 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/diamond commit 62db819c1db857d3fba94dc4e290ee0f50f7928d
iuc
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12 Block size = 2000000000
60f307965815 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/diamond commit 62db819c1db857d3fba94dc4e290ee0f50f7928d
iuc
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13 Current RSS: 6.5 MB, Peak RSS: 6.5 MB
60f307965815 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/diamond commit 62db819c1db857d3fba94dc4e290ee0f50f7928d
iuc
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14 Opening the input file... [0s]
60f307965815 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/diamond commit 62db819c1db857d3fba94dc4e290ee0f50f7928d
iuc
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15 Opening the output file... [0s]
60f307965815 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/diamond commit 62db819c1db857d3fba94dc4e290ee0f50f7928d
iuc
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16 Current RSS: 6.6 MB, Peak RSS: 6.6 MB
60f307965815 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/diamond commit 62db819c1db857d3fba94dc4e290ee0f50f7928d
iuc
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17 Loading query sequences... Sequences = 6, letters = 1694, average length = 282
60f307965815 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/diamond commit 62db819c1db857d3fba94dc4e290ee0f50f7928d
iuc
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18 [0s]
60f307965815 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/diamond commit 62db819c1db857d3fba94dc4e290ee0f50f7928d
iuc
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19 Sequences = 6, letters = 1694, average length = 282
60f307965815 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/diamond commit 62db819c1db857d3fba94dc4e290ee0f50f7928d
iuc
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20 Masking queries... [0s]
60f307965815 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/diamond commit 62db819c1db857d3fba94dc4e290ee0f50f7928d
iuc
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21 Current RSS: 7.1 MB, Peak RSS: 7.1 MB
60f307965815 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/diamond commit 62db819c1db857d3fba94dc4e290ee0f50f7928d
iuc
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22 Seed partition bits = 8
60f307965815 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/diamond commit 62db819c1db857d3fba94dc4e290ee0f50f7928d
iuc
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23 Algorithm: Double-indexed
60f307965815 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/diamond commit 62db819c1db857d3fba94dc4e290ee0f50f7928d
iuc
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24 Shape configuration: 111101110111,111011010010111
60f307965815 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/diamond commit 62db819c1db857d3fba94dc4e290ee0f50f7928d
iuc
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25 Building query histograms... [0s]
60f307965815 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/diamond commit 62db819c1db857d3fba94dc4e290ee0f50f7928d
iuc
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26 Current RSS: 7.1 MB, Peak RSS: 7.1 MB
60f307965815 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/diamond commit 62db819c1db857d3fba94dc4e290ee0f50f7928d
iuc
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27 Seeking in database... [0s]
60f307965815 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/diamond commit 62db819c1db857d3fba94dc4e290ee0f50f7928d
iuc
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28 Loading reference sequences... Sequences = 2, letters = 568, average length = 284
60f307965815 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/diamond commit 62db819c1db857d3fba94dc4e290ee0f50f7928d
iuc
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29 [0s]
60f307965815 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/diamond commit 62db819c1db857d3fba94dc4e290ee0f50f7928d
iuc
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30 Current RSS: 7.1 MB, Peak RSS: 7.1 MB
60f307965815 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/diamond commit 62db819c1db857d3fba94dc4e290ee0f50f7928d
iuc
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31 Masking reference... [0s]
60f307965815 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/diamond commit 62db819c1db857d3fba94dc4e290ee0f50f7928d
iuc
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32 Masked letters: 0
60f307965815 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/diamond commit 62db819c1db857d3fba94dc4e290ee0f50f7928d
iuc
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33 Initializing temporary storage... Async_buffer() 1
60f307965815 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/diamond commit 62db819c1db857d3fba94dc4e290ee0f50f7928d
iuc
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34 [0s]
60f307965815 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/diamond commit 62db819c1db857d3fba94dc4e290ee0f50f7928d
iuc
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35 Building reference histograms... [0s]
60f307965815 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/diamond commit 62db819c1db857d3fba94dc4e290ee0f50f7928d
iuc
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36 Allocating buffers... [0s]
60f307965815 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/diamond commit 62db819c1db857d3fba94dc4e290ee0f50f7928d
iuc
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37 Current RSS: 7.4 MB, Peak RSS: 7.4 MB
60f307965815 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/diamond commit 62db819c1db857d3fba94dc4e290ee0f50f7928d
iuc
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38 Processing query block 1, reference block 1/1, shape 1/2, index chunk 1/4.
60f307965815 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/diamond commit 62db819c1db857d3fba94dc4e290ee0f50f7928d
iuc
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39 Building reference seed array... [0s]
60f307965815 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/diamond commit 62db819c1db857d3fba94dc4e290ee0f50f7928d
iuc
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40 Current RSS: 7.4 MB, Peak RSS: 7.4 MB
60f307965815 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/diamond commit 62db819c1db857d3fba94dc4e290ee0f50f7928d
iuc
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41 Building query seed array... [0s]
60f307965815 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/diamond commit 62db819c1db857d3fba94dc4e290ee0f50f7928d
iuc
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42 Current RSS: 7.4 MB, Peak RSS: 7.4 MB
60f307965815 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/diamond commit 62db819c1db857d3fba94dc4e290ee0f50f7928d
iuc
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43 Indexed query seeds = 301/1694 (17.77%), reference seeds = 87/568 (15.32%)
60f307965815 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/diamond commit 62db819c1db857d3fba94dc4e290ee0f50f7928d
iuc
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44 Soft masked letters = 0/1694 (0.00%), 0/568 (0.00%)
60f307965815 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/diamond commit 62db819c1db857d3fba94dc4e290ee0f50f7928d
iuc
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45 Computing hash join... [0s]
60f307965815 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/diamond commit 62db819c1db857d3fba94dc4e290ee0f50f7928d
iuc
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46 Current RSS: 7.2 MB, Peak RSS: 7.4 MB
60f307965815 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/diamond commit 62db819c1db857d3fba94dc4e290ee0f50f7928d
iuc
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47 Masking low complexity seeds... [0s]
60f307965815 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/diamond commit 62db819c1db857d3fba94dc4e290ee0f50f7928d
iuc
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48 Masked seeds: 0/53 (0.00%)
60f307965815 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/diamond commit 62db819c1db857d3fba94dc4e290ee0f50f7928d
iuc
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49 Masked positions (query): 0/1694 (0.00%)
60f307965815 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/diamond commit 62db819c1db857d3fba94dc4e290ee0f50f7928d
iuc
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50 Masked positions (target): 0/568 (0.00%)
60f307965815 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/diamond commit 62db819c1db857d3fba94dc4e290ee0f50f7928d
iuc
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51 Current RSS: 7.4 MB, Peak RSS: 7.4 MB
60f307965815 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/diamond commit 62db819c1db857d3fba94dc4e290ee0f50f7928d
iuc
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52 Searching alignments... [0s]
60f307965815 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/diamond commit 62db819c1db857d3fba94dc4e290ee0f50f7928d
iuc
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53 Current RSS: 8.6 MB, Peak RSS: 9.5 MB
60f307965815 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/diamond commit 62db819c1db857d3fba94dc4e290ee0f50f7928d
iuc
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54 Deallocating memory... [0s]
60f307965815 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/diamond commit 62db819c1db857d3fba94dc4e290ee0f50f7928d
iuc
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55 Current RSS: 7.6 MB, Peak RSS: 9.5 MB
60f307965815 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/diamond commit 62db819c1db857d3fba94dc4e290ee0f50f7928d
iuc
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56 Processing query block 1, reference block 1/1, shape 1/2, index chunk 2/4.
60f307965815 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/diamond commit 62db819c1db857d3fba94dc4e290ee0f50f7928d
iuc
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57 Building reference seed array... [0s]
60f307965815 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/diamond commit 62db819c1db857d3fba94dc4e290ee0f50f7928d
iuc
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58 Current RSS: 7.6 MB, Peak RSS: 9.5 MB
60f307965815 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/diamond commit 62db819c1db857d3fba94dc4e290ee0f50f7928d
iuc
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59 Building query seed array... [0s]
60f307965815 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/diamond commit 62db819c1db857d3fba94dc4e290ee0f50f7928d
iuc
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60 Current RSS: 7.6 MB, Peak RSS: 9.5 MB
60f307965815 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/diamond commit 62db819c1db857d3fba94dc4e290ee0f50f7928d
iuc
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61 Indexed query seeds = 286/1694 (16.88%), reference seeds = 120/568 (21.13%)
60f307965815 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/diamond commit 62db819c1db857d3fba94dc4e290ee0f50f7928d
iuc
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62 Soft masked letters = 0/1694 (0.00%), 0/568 (0.00%)
60f307965815 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/diamond commit 62db819c1db857d3fba94dc4e290ee0f50f7928d
iuc
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63 Computing hash join... [0s]
60f307965815 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/diamond commit 62db819c1db857d3fba94dc4e290ee0f50f7928d
iuc
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64 Current RSS: 7.6 MB, Peak RSS: 9.5 MB
60f307965815 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/diamond commit 62db819c1db857d3fba94dc4e290ee0f50f7928d
iuc
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65 Masking low complexity seeds... [0s]
60f307965815 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/diamond commit 62db819c1db857d3fba94dc4e290ee0f50f7928d
iuc
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66 Masked seeds: 0/71 (0.00%)
60f307965815 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/diamond commit 62db819c1db857d3fba94dc4e290ee0f50f7928d
iuc
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67 Masked positions (query): 0/1694 (0.00%)
60f307965815 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/diamond commit 62db819c1db857d3fba94dc4e290ee0f50f7928d
iuc
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68 Masked positions (target): 0/568 (0.00%)
60f307965815 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/diamond commit 62db819c1db857d3fba94dc4e290ee0f50f7928d
iuc
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69 Current RSS: 7.6 MB, Peak RSS: 9.5 MB
60f307965815 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/diamond commit 62db819c1db857d3fba94dc4e290ee0f50f7928d
iuc
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70 Searching alignments... [0s]
60f307965815 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/diamond commit 62db819c1db857d3fba94dc4e290ee0f50f7928d
iuc
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71 Current RSS: 9.4 MB, Peak RSS: 9.5 MB
60f307965815 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/diamond commit 62db819c1db857d3fba94dc4e290ee0f50f7928d
iuc
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72 Deallocating memory... [0s]
60f307965815 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/diamond commit 62db819c1db857d3fba94dc4e290ee0f50f7928d
iuc
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73 Current RSS: 9.4 MB, Peak RSS: 9.5 MB
60f307965815 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/diamond commit 62db819c1db857d3fba94dc4e290ee0f50f7928d
iuc
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74 Processing query block 1, reference block 1/1, shape 1/2, index chunk 3/4.
60f307965815 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/diamond commit 62db819c1db857d3fba94dc4e290ee0f50f7928d
iuc
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75 Building reference seed array... [0s]
60f307965815 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/diamond commit 62db819c1db857d3fba94dc4e290ee0f50f7928d
iuc
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76 Current RSS: 9.4 MB, Peak RSS: 9.5 MB
60f307965815 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/diamond commit 62db819c1db857d3fba94dc4e290ee0f50f7928d
iuc
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77 Building query seed array... [0s]
60f307965815 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/diamond commit 62db819c1db857d3fba94dc4e290ee0f50f7928d
iuc
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78 Current RSS: 9.4 MB, Peak RSS: 9.5 MB
60f307965815 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/diamond commit 62db819c1db857d3fba94dc4e290ee0f50f7928d
iuc
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79 Indexed query seeds = 296/1694 (17.47%), reference seeds = 98/568 (17.25%)
60f307965815 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/diamond commit 62db819c1db857d3fba94dc4e290ee0f50f7928d
iuc
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80 Soft masked letters = 0/1694 (0.00%), 0/568 (0.00%)
60f307965815 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/diamond commit 62db819c1db857d3fba94dc4e290ee0f50f7928d
iuc
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81 Computing hash join... [0s]
60f307965815 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/diamond commit 62db819c1db857d3fba94dc4e290ee0f50f7928d
iuc
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82 Current RSS: 9.4 MB, Peak RSS: 9.5 MB
60f307965815 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/diamond commit 62db819c1db857d3fba94dc4e290ee0f50f7928d
iuc
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83 Masking low complexity seeds... [0s]
60f307965815 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/diamond commit 62db819c1db857d3fba94dc4e290ee0f50f7928d
iuc
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84 Masked seeds: 0/54 (0.00%)
60f307965815 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/diamond commit 62db819c1db857d3fba94dc4e290ee0f50f7928d
iuc
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85 Masked positions (query): 0/1694 (0.00%)
60f307965815 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/diamond commit 62db819c1db857d3fba94dc4e290ee0f50f7928d
iuc
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diff changeset
86 Masked positions (target): 0/568 (0.00%)
60f307965815 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/diamond commit 62db819c1db857d3fba94dc4e290ee0f50f7928d
iuc
parents:
diff changeset
87 Current RSS: 9.4 MB, Peak RSS: 9.5 MB
60f307965815 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/diamond commit 62db819c1db857d3fba94dc4e290ee0f50f7928d
iuc
parents:
diff changeset
88 Searching alignments... [0s]
60f307965815 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/diamond commit 62db819c1db857d3fba94dc4e290ee0f50f7928d
iuc
parents:
diff changeset
89 Current RSS: 9.4 MB, Peak RSS: 9.5 MB
60f307965815 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/diamond commit 62db819c1db857d3fba94dc4e290ee0f50f7928d
iuc
parents:
diff changeset
90 Deallocating memory... [0s]
60f307965815 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/diamond commit 62db819c1db857d3fba94dc4e290ee0f50f7928d
iuc
parents:
diff changeset
91 Current RSS: 9.4 MB, Peak RSS: 9.5 MB
60f307965815 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/diamond commit 62db819c1db857d3fba94dc4e290ee0f50f7928d
iuc
parents:
diff changeset
92 Processing query block 1, reference block 1/1, shape 1/2, index chunk 4/4.
60f307965815 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/diamond commit 62db819c1db857d3fba94dc4e290ee0f50f7928d
iuc
parents:
diff changeset
93 Building reference seed array... [0s]
60f307965815 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/diamond commit 62db819c1db857d3fba94dc4e290ee0f50f7928d
iuc
parents:
diff changeset
94 Current RSS: 9.4 MB, Peak RSS: 9.5 MB
60f307965815 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/diamond commit 62db819c1db857d3fba94dc4e290ee0f50f7928d
iuc
parents:
diff changeset
95 Building query seed array... [0s]
60f307965815 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/diamond commit 62db819c1db857d3fba94dc4e290ee0f50f7928d
iuc
parents:
diff changeset
96 Current RSS: 9.4 MB, Peak RSS: 9.5 MB
60f307965815 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/diamond commit 62db819c1db857d3fba94dc4e290ee0f50f7928d
iuc
parents:
diff changeset
97 Indexed query seeds = 307/1694 (18.12%), reference seeds = 109/568 (19.19%)
60f307965815 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/diamond commit 62db819c1db857d3fba94dc4e290ee0f50f7928d
iuc
parents:
diff changeset
98 Soft masked letters = 0/1694 (0.00%), 0/568 (0.00%)
60f307965815 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/diamond commit 62db819c1db857d3fba94dc4e290ee0f50f7928d
iuc
parents:
diff changeset
99 Computing hash join... [0s]
60f307965815 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/diamond commit 62db819c1db857d3fba94dc4e290ee0f50f7928d
iuc
parents:
diff changeset
100 Current RSS: 9.4 MB, Peak RSS: 9.5 MB
60f307965815 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/diamond commit 62db819c1db857d3fba94dc4e290ee0f50f7928d
iuc
parents:
diff changeset
101 Masking low complexity seeds... [0s]
60f307965815 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/diamond commit 62db819c1db857d3fba94dc4e290ee0f50f7928d
iuc
parents:
diff changeset
102 Masked seeds: 0/61 (0.00%)
60f307965815 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/diamond commit 62db819c1db857d3fba94dc4e290ee0f50f7928d
iuc
parents:
diff changeset
103 Masked positions (query): 0/1694 (0.00%)
60f307965815 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/diamond commit 62db819c1db857d3fba94dc4e290ee0f50f7928d
iuc
parents:
diff changeset
104 Masked positions (target): 0/568 (0.00%)
60f307965815 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/diamond commit 62db819c1db857d3fba94dc4e290ee0f50f7928d
iuc
parents:
diff changeset
105 Current RSS: 9.4 MB, Peak RSS: 9.5 MB
60f307965815 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/diamond commit 62db819c1db857d3fba94dc4e290ee0f50f7928d
iuc
parents:
diff changeset
106 Searching alignments... [0s]
60f307965815 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/diamond commit 62db819c1db857d3fba94dc4e290ee0f50f7928d
iuc
parents:
diff changeset
107 Current RSS: 9.4 MB, Peak RSS: 9.5 MB
60f307965815 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/diamond commit 62db819c1db857d3fba94dc4e290ee0f50f7928d
iuc
parents:
diff changeset
108 Deallocating memory... [0s]
60f307965815 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/diamond commit 62db819c1db857d3fba94dc4e290ee0f50f7928d
iuc
parents:
diff changeset
109 Current RSS: 9.4 MB, Peak RSS: 9.5 MB
60f307965815 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/diamond commit 62db819c1db857d3fba94dc4e290ee0f50f7928d
iuc
parents:
diff changeset
110 Current RSS: 9.4 MB, Peak RSS: 9.5 MB
60f307965815 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/diamond commit 62db819c1db857d3fba94dc4e290ee0f50f7928d
iuc
parents:
diff changeset
111 Processing query block 1, reference block 1/1, shape 2/2, index chunk 1/4.
60f307965815 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/diamond commit 62db819c1db857d3fba94dc4e290ee0f50f7928d
iuc
parents:
diff changeset
112 Building reference seed array... [0s]
60f307965815 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/diamond commit 62db819c1db857d3fba94dc4e290ee0f50f7928d
iuc
parents:
diff changeset
113 Current RSS: 9.4 MB, Peak RSS: 9.5 MB
60f307965815 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/diamond commit 62db819c1db857d3fba94dc4e290ee0f50f7928d
iuc
parents:
diff changeset
114 Building query seed array... [0s]
60f307965815 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/diamond commit 62db819c1db857d3fba94dc4e290ee0f50f7928d
iuc
parents:
diff changeset
115 Current RSS: 9.4 MB, Peak RSS: 9.5 MB
60f307965815 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/diamond commit 62db819c1db857d3fba94dc4e290ee0f50f7928d
iuc
parents:
diff changeset
116 Indexed query seeds = 301/1694 (17.77%), reference seeds = 92/568 (16.20%)
60f307965815 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/diamond commit 62db819c1db857d3fba94dc4e290ee0f50f7928d
iuc
parents:
diff changeset
117 Soft masked letters = 0/1694 (0.00%), 0/568 (0.00%)
60f307965815 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/diamond commit 62db819c1db857d3fba94dc4e290ee0f50f7928d
iuc
parents:
diff changeset
118 Computing hash join... [0s]
60f307965815 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/diamond commit 62db819c1db857d3fba94dc4e290ee0f50f7928d
iuc
parents:
diff changeset
119 Current RSS: 9.4 MB, Peak RSS: 9.5 MB
60f307965815 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/diamond commit 62db819c1db857d3fba94dc4e290ee0f50f7928d
iuc
parents:
diff changeset
120 Masking low complexity seeds... [0s]
60f307965815 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/diamond commit 62db819c1db857d3fba94dc4e290ee0f50f7928d
iuc
parents:
diff changeset
121 Masked seeds: 0/51 (0.00%)
60f307965815 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/diamond commit 62db819c1db857d3fba94dc4e290ee0f50f7928d
iuc
parents:
diff changeset
122 Masked positions (query): 0/1694 (0.00%)
60f307965815 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/diamond commit 62db819c1db857d3fba94dc4e290ee0f50f7928d
iuc
parents:
diff changeset
123 Masked positions (target): 0/568 (0.00%)
60f307965815 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/diamond commit 62db819c1db857d3fba94dc4e290ee0f50f7928d
iuc
parents:
diff changeset
124 Current RSS: 9.4 MB, Peak RSS: 9.5 MB
60f307965815 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/diamond commit 62db819c1db857d3fba94dc4e290ee0f50f7928d
iuc
parents:
diff changeset
125 Searching alignments... [0s]
60f307965815 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/diamond commit 62db819c1db857d3fba94dc4e290ee0f50f7928d
iuc
parents:
diff changeset
126 Current RSS: 9.4 MB, Peak RSS: 9.5 MB
60f307965815 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/diamond commit 62db819c1db857d3fba94dc4e290ee0f50f7928d
iuc
parents:
diff changeset
127 Deallocating memory... [0s]
60f307965815 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/diamond commit 62db819c1db857d3fba94dc4e290ee0f50f7928d
iuc
parents:
diff changeset
128 Current RSS: 9.4 MB, Peak RSS: 9.5 MB
60f307965815 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/diamond commit 62db819c1db857d3fba94dc4e290ee0f50f7928d
iuc
parents:
diff changeset
129 Processing query block 1, reference block 1/1, shape 2/2, index chunk 2/4.
60f307965815 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/diamond commit 62db819c1db857d3fba94dc4e290ee0f50f7928d
iuc
parents:
diff changeset
130 Building reference seed array... [0s]
60f307965815 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/diamond commit 62db819c1db857d3fba94dc4e290ee0f50f7928d
iuc
parents:
diff changeset
131 Current RSS: 9.4 MB, Peak RSS: 9.5 MB
60f307965815 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/diamond commit 62db819c1db857d3fba94dc4e290ee0f50f7928d
iuc
parents:
diff changeset
132 Building query seed array... [0s]
60f307965815 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/diamond commit 62db819c1db857d3fba94dc4e290ee0f50f7928d
iuc
parents:
diff changeset
133 Current RSS: 9.4 MB, Peak RSS: 9.5 MB
60f307965815 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/diamond commit 62db819c1db857d3fba94dc4e290ee0f50f7928d
iuc
parents:
diff changeset
134 Indexed query seeds = 283/1694 (16.71%), reference seeds = 95/568 (16.73%)
60f307965815 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/diamond commit 62db819c1db857d3fba94dc4e290ee0f50f7928d
iuc
parents:
diff changeset
135 Soft masked letters = 0/1694 (0.00%), 0/568 (0.00%)
60f307965815 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/diamond commit 62db819c1db857d3fba94dc4e290ee0f50f7928d
iuc
parents:
diff changeset
136 Computing hash join... [0s]
60f307965815 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/diamond commit 62db819c1db857d3fba94dc4e290ee0f50f7928d
iuc
parents:
diff changeset
137 Current RSS: 9.4 MB, Peak RSS: 9.5 MB
60f307965815 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/diamond commit 62db819c1db857d3fba94dc4e290ee0f50f7928d
iuc
parents:
diff changeset
138 Masking low complexity seeds... [0s]
60f307965815 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/diamond commit 62db819c1db857d3fba94dc4e290ee0f50f7928d
iuc
parents:
diff changeset
139 Masked seeds: 0/55 (0.00%)
60f307965815 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/diamond commit 62db819c1db857d3fba94dc4e290ee0f50f7928d
iuc
parents:
diff changeset
140 Masked positions (query): 0/1694 (0.00%)
60f307965815 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/diamond commit 62db819c1db857d3fba94dc4e290ee0f50f7928d
iuc
parents:
diff changeset
141 Masked positions (target): 0/568 (0.00%)
60f307965815 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/diamond commit 62db819c1db857d3fba94dc4e290ee0f50f7928d
iuc
parents:
diff changeset
142 Current RSS: 9.4 MB, Peak RSS: 9.5 MB
60f307965815 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/diamond commit 62db819c1db857d3fba94dc4e290ee0f50f7928d
iuc
parents:
diff changeset
143 Searching alignments... [0s]
60f307965815 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/diamond commit 62db819c1db857d3fba94dc4e290ee0f50f7928d
iuc
parents:
diff changeset
144 Current RSS: 9.4 MB, Peak RSS: 9.5 MB
60f307965815 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/diamond commit 62db819c1db857d3fba94dc4e290ee0f50f7928d
iuc
parents:
diff changeset
145 Deallocating memory... [0s]
60f307965815 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/diamond commit 62db819c1db857d3fba94dc4e290ee0f50f7928d
iuc
parents:
diff changeset
146 Current RSS: 9.4 MB, Peak RSS: 9.5 MB
60f307965815 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/diamond commit 62db819c1db857d3fba94dc4e290ee0f50f7928d
iuc
parents:
diff changeset
147 Processing query block 1, reference block 1/1, shape 2/2, index chunk 3/4.
60f307965815 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/diamond commit 62db819c1db857d3fba94dc4e290ee0f50f7928d
iuc
parents:
diff changeset
148 Building reference seed array... [0s]
60f307965815 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/diamond commit 62db819c1db857d3fba94dc4e290ee0f50f7928d
iuc
parents:
diff changeset
149 Current RSS: 9.4 MB, Peak RSS: 9.5 MB
60f307965815 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/diamond commit 62db819c1db857d3fba94dc4e290ee0f50f7928d
iuc
parents:
diff changeset
150 Building query seed array... [0s]
60f307965815 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/diamond commit 62db819c1db857d3fba94dc4e290ee0f50f7928d
iuc
parents:
diff changeset
151 Current RSS: 9.4 MB, Peak RSS: 9.5 MB
60f307965815 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/diamond commit 62db819c1db857d3fba94dc4e290ee0f50f7928d
iuc
parents:
diff changeset
152 Indexed query seeds = 266/1694 (15.70%), reference seeds = 93/568 (16.37%)
60f307965815 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/diamond commit 62db819c1db857d3fba94dc4e290ee0f50f7928d
iuc
parents:
diff changeset
153 Soft masked letters = 0/1694 (0.00%), 0/568 (0.00%)
60f307965815 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/diamond commit 62db819c1db857d3fba94dc4e290ee0f50f7928d
iuc
parents:
diff changeset
154 Computing hash join... [0s]
60f307965815 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/diamond commit 62db819c1db857d3fba94dc4e290ee0f50f7928d
iuc
parents:
diff changeset
155 Current RSS: 9.4 MB, Peak RSS: 9.5 MB
60f307965815 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/diamond commit 62db819c1db857d3fba94dc4e290ee0f50f7928d
iuc
parents:
diff changeset
156 Masking low complexity seeds... [0s]
60f307965815 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/diamond commit 62db819c1db857d3fba94dc4e290ee0f50f7928d
iuc
parents:
diff changeset
157 Masked seeds: 0/56 (0.00%)
60f307965815 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/diamond commit 62db819c1db857d3fba94dc4e290ee0f50f7928d
iuc
parents:
diff changeset
158 Masked positions (query): 0/1694 (0.00%)
60f307965815 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/diamond commit 62db819c1db857d3fba94dc4e290ee0f50f7928d
iuc
parents:
diff changeset
159 Masked positions (target): 0/568 (0.00%)
60f307965815 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/diamond commit 62db819c1db857d3fba94dc4e290ee0f50f7928d
iuc
parents:
diff changeset
160 Current RSS: 9.4 MB, Peak RSS: 9.5 MB
60f307965815 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/diamond commit 62db819c1db857d3fba94dc4e290ee0f50f7928d
iuc
parents:
diff changeset
161 Searching alignments... [0s]
60f307965815 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/diamond commit 62db819c1db857d3fba94dc4e290ee0f50f7928d
iuc
parents:
diff changeset
162 Current RSS: 9.4 MB, Peak RSS: 9.5 MB
60f307965815 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/diamond commit 62db819c1db857d3fba94dc4e290ee0f50f7928d
iuc
parents:
diff changeset
163 Deallocating memory... [0s]
60f307965815 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/diamond commit 62db819c1db857d3fba94dc4e290ee0f50f7928d
iuc
parents:
diff changeset
164 Current RSS: 9.4 MB, Peak RSS: 9.5 MB
60f307965815 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/diamond commit 62db819c1db857d3fba94dc4e290ee0f50f7928d
iuc
parents:
diff changeset
165 Processing query block 1, reference block 1/1, shape 2/2, index chunk 4/4.
60f307965815 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/diamond commit 62db819c1db857d3fba94dc4e290ee0f50f7928d
iuc
parents:
diff changeset
166 Building reference seed array... [0s]
60f307965815 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/diamond commit 62db819c1db857d3fba94dc4e290ee0f50f7928d
iuc
parents:
diff changeset
167 Current RSS: 9.4 MB, Peak RSS: 9.5 MB
60f307965815 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/diamond commit 62db819c1db857d3fba94dc4e290ee0f50f7928d
iuc
parents:
diff changeset
168 Building query seed array... [0s]
60f307965815 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/diamond commit 62db819c1db857d3fba94dc4e290ee0f50f7928d
iuc
parents:
diff changeset
169 Current RSS: 9.4 MB, Peak RSS: 9.5 MB
60f307965815 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/diamond commit 62db819c1db857d3fba94dc4e290ee0f50f7928d
iuc
parents:
diff changeset
170 Indexed query seeds = 305/1694 (18.00%), reference seeds = 113/568 (19.89%)
60f307965815 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/diamond commit 62db819c1db857d3fba94dc4e290ee0f50f7928d
iuc
parents:
diff changeset
171 Soft masked letters = 0/1694 (0.00%), 0/568 (0.00%)
60f307965815 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/diamond commit 62db819c1db857d3fba94dc4e290ee0f50f7928d
iuc
parents:
diff changeset
172 Computing hash join... [0s]
60f307965815 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/diamond commit 62db819c1db857d3fba94dc4e290ee0f50f7928d
iuc
parents:
diff changeset
173 Current RSS: 9.4 MB, Peak RSS: 9.5 MB
60f307965815 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/diamond commit 62db819c1db857d3fba94dc4e290ee0f50f7928d
iuc
parents:
diff changeset
174 Masking low complexity seeds... [0s]
60f307965815 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/diamond commit 62db819c1db857d3fba94dc4e290ee0f50f7928d
iuc
parents:
diff changeset
175 Masked seeds: 0/68 (0.00%)
60f307965815 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/diamond commit 62db819c1db857d3fba94dc4e290ee0f50f7928d
iuc
parents:
diff changeset
176 Masked positions (query): 0/1694 (0.00%)
60f307965815 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/diamond commit 62db819c1db857d3fba94dc4e290ee0f50f7928d
iuc
parents:
diff changeset
177 Masked positions (target): 0/568 (0.00%)
60f307965815 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/diamond commit 62db819c1db857d3fba94dc4e290ee0f50f7928d
iuc
parents:
diff changeset
178 Current RSS: 9.4 MB, Peak RSS: 9.5 MB
60f307965815 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/diamond commit 62db819c1db857d3fba94dc4e290ee0f50f7928d
iuc
parents:
diff changeset
179 Searching alignments... [0s]
60f307965815 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/diamond commit 62db819c1db857d3fba94dc4e290ee0f50f7928d
iuc
parents:
diff changeset
180 Current RSS: 9.4 MB, Peak RSS: 9.5 MB
60f307965815 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/diamond commit 62db819c1db857d3fba94dc4e290ee0f50f7928d
iuc
parents:
diff changeset
181 Deallocating memory... [0s]
60f307965815 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/diamond commit 62db819c1db857d3fba94dc4e290ee0f50f7928d
iuc
parents:
diff changeset
182 Current RSS: 9.4 MB, Peak RSS: 9.5 MB
60f307965815 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/diamond commit 62db819c1db857d3fba94dc4e290ee0f50f7928d
iuc
parents:
diff changeset
183 Current RSS: 9.4 MB, Peak RSS: 9.5 MB
60f307965815 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/diamond commit 62db819c1db857d3fba94dc4e290ee0f50f7928d
iuc
parents:
diff changeset
184 Deallocating buffers... [0s]
60f307965815 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/diamond commit 62db819c1db857d3fba94dc4e290ee0f50f7928d
iuc
parents:
diff changeset
185 Clearing query masking... [0s]
60f307965815 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/diamond commit 62db819c1db857d3fba94dc4e290ee0f50f7928d
iuc
parents:
diff changeset
186 Current RSS: 9.4 MB, Peak RSS: 9.5 MB
60f307965815 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/diamond commit 62db819c1db857d3fba94dc4e290ee0f50f7928d
iuc
parents:
diff changeset
187 Computing alignments... Async_buffer.load() 21(2.93367e-07 GB, 2.38419e-07 GB on disk)
60f307965815 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/diamond commit 62db819c1db857d3fba94dc4e290ee0f50f7928d
iuc
parents:
diff changeset
188 Loading trace points... [0s]
60f307965815 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/diamond commit 62db819c1db857d3fba94dc4e290ee0f50f7928d
iuc
parents:
diff changeset
189 Sorting trace points... [0s]
60f307965815 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/diamond commit 62db819c1db857d3fba94dc4e290ee0f50f7928d
iuc
parents:
diff changeset
190 Computing partition... [0s]
60f307965815 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/diamond commit 62db819c1db857d3fba94dc4e290ee0f50f7928d
iuc
parents:
diff changeset
191 Computing alignments... [0s]
60f307965815 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/diamond commit 62db819c1db857d3fba94dc4e290ee0f50f7928d
iuc
parents:
diff changeset
192 Deallocating buffers... [0s]
60f307965815 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/diamond commit 62db819c1db857d3fba94dc4e290ee0f50f7928d
iuc
parents:
diff changeset
193 Loading trace points... [0s]
60f307965815 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/diamond commit 62db819c1db857d3fba94dc4e290ee0f50f7928d
iuc
parents:
diff changeset
194 [0.001s]
60f307965815 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/diamond commit 62db819c1db857d3fba94dc4e290ee0f50f7928d
iuc
parents:
diff changeset
195 Deallocating reference... [0s]
60f307965815 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/diamond commit 62db819c1db857d3fba94dc4e290ee0f50f7928d
iuc
parents:
diff changeset
196 Loading reference sequences... Current RSS: 10.1 MB, Peak RSS: 10.1 MB
60f307965815 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/diamond commit 62db819c1db857d3fba94dc4e290ee0f50f7928d
iuc
parents:
diff changeset
197 [0s]
60f307965815 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/diamond commit 62db819c1db857d3fba94dc4e290ee0f50f7928d
iuc
parents:
diff changeset
198 Deallocating buffers... [0s]
60f307965815 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/diamond commit 62db819c1db857d3fba94dc4e290ee0f50f7928d
iuc
parents:
diff changeset
199 Current RSS: 10.1 MB, Peak RSS: 10.1 MB
60f307965815 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/diamond commit 62db819c1db857d3fba94dc4e290ee0f50f7928d
iuc
parents:
diff changeset
200 Deallocating queries... [0s]
60f307965815 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/diamond commit 62db819c1db857d3fba94dc4e290ee0f50f7928d
iuc
parents:
diff changeset
201 Current RSS: 10.1 MB, Peak RSS: 10.1 MB
60f307965815 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/diamond commit 62db819c1db857d3fba94dc4e290ee0f50f7928d
iuc
parents:
diff changeset
202 Loading query sequences... [0s]
60f307965815 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/diamond commit 62db819c1db857d3fba94dc4e290ee0f50f7928d
iuc
parents:
diff changeset
203 Closing the input file... [0s]
60f307965815 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/diamond commit 62db819c1db857d3fba94dc4e290ee0f50f7928d
iuc
parents:
diff changeset
204 Closing the output file... [0s]
60f307965815 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/diamond commit 62db819c1db857d3fba94dc4e290ee0f50f7928d
iuc
parents:
diff changeset
205 Closing the database... [0s]
60f307965815 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/diamond commit 62db819c1db857d3fba94dc4e290ee0f50f7928d
iuc
parents:
diff changeset
206 Cleaning up... [0s]
60f307965815 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/diamond commit 62db819c1db857d3fba94dc4e290ee0f50f7928d
iuc
parents:
diff changeset
207 Current RSS: 10.1 MB, Peak RSS: 10.1 MB
60f307965815 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/diamond commit 62db819c1db857d3fba94dc4e290ee0f50f7928d
iuc
parents:
diff changeset
208 Total time = 0.017s
60f307965815 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/diamond commit 62db819c1db857d3fba94dc4e290ee0f50f7928d
iuc
parents:
diff changeset
209 Hits (filter stage 0) = 774
60f307965815 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/diamond commit 62db819c1db857d3fba94dc4e290ee0f50f7928d
iuc
parents:
diff changeset
210 Hits (filter stage 1) = 774 (100 %)
60f307965815 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/diamond commit 62db819c1db857d3fba94dc4e290ee0f50f7928d
iuc
parents:
diff changeset
211 Hits (filter stage 2) = 774 (100 %)
60f307965815 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/diamond commit 62db819c1db857d3fba94dc4e290ee0f50f7928d
iuc
parents:
diff changeset
212 Hits (filter stage 3) = 21 (2.71318 %)
60f307965815 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/diamond commit 62db819c1db857d3fba94dc4e290ee0f50f7928d
iuc
parents:
diff changeset
213 Target hits (stage 0) = 2
60f307965815 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/diamond commit 62db819c1db857d3fba94dc4e290ee0f50f7928d
iuc
parents:
diff changeset
214 Target hits (stage 1) = 0
60f307965815 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/diamond commit 62db819c1db857d3fba94dc4e290ee0f50f7928d
iuc
parents:
diff changeset
215 Target hits (stage 2) = 2
60f307965815 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/diamond commit 62db819c1db857d3fba94dc4e290ee0f50f7928d
iuc
parents:
diff changeset
216 Target hits (stage 3) = 2 (0 (0%) with CBS)
60f307965815 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/diamond commit 62db819c1db857d3fba94dc4e290ee0f50f7928d
iuc
parents:
diff changeset
217 Target hits (stage 4) = 2
60f307965815 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/diamond commit 62db819c1db857d3fba94dc4e290ee0f50f7928d
iuc
parents:
diff changeset
218 Target hits (stage 5) = 2
60f307965815 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/diamond commit 62db819c1db857d3fba94dc4e290ee0f50f7928d
iuc
parents:
diff changeset
219 Target hits (stage 6) = 2
60f307965815 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/diamond commit 62db819c1db857d3fba94dc4e290ee0f50f7928d
iuc
parents:
diff changeset
220 Swipe realignments = 0
60f307965815 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/diamond commit 62db819c1db857d3fba94dc4e290ee0f50f7928d
iuc
parents:
diff changeset
221 Matrix adjusts = 0
60f307965815 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/diamond commit 62db819c1db857d3fba94dc4e290ee0f50f7928d
iuc
parents:
diff changeset
222 Extensions (8 bit) = 0
60f307965815 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/diamond commit 62db819c1db857d3fba94dc4e290ee0f50f7928d
iuc
parents:
diff changeset
223 Extensions (16 bit) = 4
60f307965815 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/diamond commit 62db819c1db857d3fba94dc4e290ee0f50f7928d
iuc
parents:
diff changeset
224 Extensions (32 bit) = 0
60f307965815 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/diamond commit 62db819c1db857d3fba94dc4e290ee0f50f7928d
iuc
parents:
diff changeset
225 Overflows (8 bit) = 0
60f307965815 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/diamond commit 62db819c1db857d3fba94dc4e290ee0f50f7928d
iuc
parents:
diff changeset
226 Wasted (16 bit) = 0
60f307965815 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/diamond commit 62db819c1db857d3fba94dc4e290ee0f50f7928d
iuc
parents:
diff changeset
227 Effort (Extension) = 8
60f307965815 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/diamond commit 62db819c1db857d3fba94dc4e290ee0f50f7928d
iuc
parents:
diff changeset
228 Effort (Cells) = 0
60f307965815 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/diamond commit 62db819c1db857d3fba94dc4e290ee0f50f7928d
iuc
parents:
diff changeset
229 Cells (8 bit) = 0
60f307965815 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/diamond commit 62db819c1db857d3fba94dc4e290ee0f50f7928d
iuc
parents:
diff changeset
230 Cells (16 bit) = 0
60f307965815 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/diamond commit 62db819c1db857d3fba94dc4e290ee0f50f7928d
iuc
parents:
diff changeset
231 SWIPE tasks = 2
60f307965815 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/diamond commit 62db819c1db857d3fba94dc4e290ee0f50f7928d
iuc
parents:
diff changeset
232 SWIPE tasks (async) = 0
60f307965815 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/diamond commit 62db819c1db857d3fba94dc4e290ee0f50f7928d
iuc
parents:
diff changeset
233 Trivial aln = 0
60f307965815 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/diamond commit 62db819c1db857d3fba94dc4e290ee0f50f7928d
iuc
parents:
diff changeset
234 Hard queries = 0
60f307965815 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/diamond commit 62db819c1db857d3fba94dc4e290ee0f50f7928d
iuc
parents:
diff changeset
235 Gapped filter (targets) = 0
60f307965815 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/diamond commit 62db819c1db857d3fba94dc4e290ee0f50f7928d
iuc
parents:
diff changeset
236 Gapped filter (hits) stage 1 = 0
60f307965815 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/diamond commit 62db819c1db857d3fba94dc4e290ee0f50f7928d
iuc
parents:
diff changeset
237 Gapped filter (hits) stage 2 = 0
60f307965815 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/diamond commit 62db819c1db857d3fba94dc4e290ee0f50f7928d
iuc
parents:
diff changeset
238 Time (Load seed hit targets) = 5e-06s (CPU)
60f307965815 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/diamond commit 62db819c1db857d3fba94dc4e290ee0f50f7928d
iuc
parents:
diff changeset
239 Time (Sort targets by score) = 0s (CPU)
60f307965815 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/diamond commit 62db819c1db857d3fba94dc4e290ee0f50f7928d
iuc
parents:
diff changeset
240 Time (Gapped filter) = 0s (CPU)
60f307965815 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/diamond commit 62db819c1db857d3fba94dc4e290ee0f50f7928d
iuc
parents:
diff changeset
241 Time (Matrix adjust) = 0s (CPU)
60f307965815 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/diamond commit 62db819c1db857d3fba94dc4e290ee0f50f7928d
iuc
parents:
diff changeset
242 Time (Chaining) = 3.4e-05s (CPU)
60f307965815 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/diamond commit 62db819c1db857d3fba94dc4e290ee0f50f7928d
iuc
parents:
diff changeset
243 Time (DP target sorting) = 0s (CPU)
60f307965815 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/diamond commit 62db819c1db857d3fba94dc4e290ee0f50f7928d
iuc
parents:
diff changeset
244 Time (Query profiles) = 0s (CPU)
60f307965815 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/diamond commit 62db819c1db857d3fba94dc4e290ee0f50f7928d
iuc
parents:
diff changeset
245 Time (Smith Waterman) = 0.000352s (CPU)
60f307965815 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/diamond commit 62db819c1db857d3fba94dc4e290ee0f50f7928d
iuc
parents:
diff changeset
246 Time (Anchored SWIPE Alloc) = 0s (CPU)
60f307965815 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/diamond commit 62db819c1db857d3fba94dc4e290ee0f50f7928d
iuc
parents:
diff changeset
247 Time (Anchored SWIPE Sort) = 0s (CPU)
60f307965815 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/diamond commit 62db819c1db857d3fba94dc4e290ee0f50f7928d
iuc
parents:
diff changeset
248 Time (Anchored SWIPE Add) = 0s (CPU)
60f307965815 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/diamond commit 62db819c1db857d3fba94dc4e290ee0f50f7928d
iuc
parents:
diff changeset
249 Time (Anchored SWIPE Output) = 0s (CPU)
60f307965815 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/diamond commit 62db819c1db857d3fba94dc4e290ee0f50f7928d
iuc
parents:
diff changeset
250 Time (Anchored SWIPE) = 0s (CPU)
60f307965815 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/diamond commit 62db819c1db857d3fba94dc4e290ee0f50f7928d
iuc
parents:
diff changeset
251 Time (Smith Waterman TB) = 0s (CPU)
60f307965815 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/diamond commit 62db819c1db857d3fba94dc4e290ee0f50f7928d
iuc
parents:
diff changeset
252 Time (Smith Waterman-32) = 0s (CPU)
60f307965815 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/diamond commit 62db819c1db857d3fba94dc4e290ee0f50f7928d
iuc
parents:
diff changeset
253 Time (Traceback) = 1.6e-05s (CPU)
60f307965815 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/diamond commit 62db819c1db857d3fba94dc4e290ee0f50f7928d
iuc
parents:
diff changeset
254 Time (Target parallel) = 0s (wall)
60f307965815 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/diamond commit 62db819c1db857d3fba94dc4e290ee0f50f7928d
iuc
parents:
diff changeset
255 Time (Load seed hits) = 0.000797s (wall)
60f307965815 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/diamond commit 62db819c1db857d3fba94dc4e290ee0f50f7928d
iuc
parents:
diff changeset
256 Time (Sort seed hits) = 2.8e-05s (wall)
60f307965815 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/diamond commit 62db819c1db857d3fba94dc4e290ee0f50f7928d
iuc
parents:
diff changeset
257 Time (Extension) = 0.000568s (wall)
60f307965815 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/diamond commit 62db819c1db857d3fba94dc4e290ee0f50f7928d
iuc
parents:
diff changeset
258 Temporary disk space used (search): 2.38419e-07 GB
60f307965815 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/diamond commit 62db819c1db857d3fba94dc4e290ee0f50f7928d
iuc
parents:
diff changeset
259 Reported 2 pairwise alignments, 2 HSPs.
60f307965815 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/diamond commit 62db819c1db857d3fba94dc4e290ee0f50f7928d
iuc
parents:
diff changeset
260 1 queries aligned.
60f307965815 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/diamond commit 62db819c1db857d3fba94dc4e290ee0f50f7928d
iuc
parents:
diff changeset
261 Current RSS: 10.1 MB, Peak RSS: 10.1 MB