Mercurial > repos > bgruening > find_three_genes_located_nearby_workflow

changeset 1:12a1efdaeb5b draft

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Uploaded
author bgruening
date Tue, 17 Mar 2015 10:00:21 -0400
parents e42f2c5118ac
children 3620e8c84e1a
files find_three_genes_located_nearby.ga repository_dependencies.xml
diffstat 2 files changed, 18 insertions(+), 24 deletions(-) [+]
line wrap: on
line diff
--- a/find_three_genes_located_nearby.ga	Tue Mar 17 09:40:46 2015 -0400
+++ b/find_three_genes_located_nearby.ga	Tue Mar 17 10:00:21 2015 -0400
@@ -371,7 +371,7 @@
                 }
             ], 
             "position": {
-                "left": 768.38330078125, 
+                "left": 768.3833312988281, 
                 "top": 386.3833312988281
             }, 
             "post_job_actions": {
@@ -406,7 +406,7 @@
                 }
             ], 
             "position": {
-                "left": 747.88330078125, 
+                "left": 747.8833312988281, 
                 "top": 673.88330078125
             }, 
             "post_job_actions": {
@@ -441,7 +441,7 @@
                 }
             ], 
             "position": {
-                "left": 769.11669921875, 
+                "left": 769.1166687011719, 
                 "top": 879.61669921875
             }, 
             "post_job_actions": {
@@ -511,7 +511,7 @@
                 }
             ], 
             "position": {
-                "left": 801.88330078125, 
+                "left": 801.8833312988281, 
                 "top": 668.88330078125
             }, 
             "post_job_actions": {
@@ -546,7 +546,7 @@
                 }
             ], 
             "position": {
-                "left": 813.11669921875, 
+                "left": 813.1166687011719, 
                 "top": 871.61669921875
             }, 
             "post_job_actions": {
@@ -626,7 +626,7 @@
             ], 
             "position": {
                 "left": 854.88330078125, 
-                "top": 661.8833312988281
+                "top": 661.88330078125
             }, 
             "post_job_actions": {
                 "HideDatasetActionout_file1": {
@@ -696,7 +696,7 @@
             ], 
             "position": {
                 "left": 911.88330078125, 
-                "top": 658.8833312988281
+                "top": 658.88330078125
             }, 
             "post_job_actions": {}, 
             "tool_errors": null, 
@@ -760,7 +760,7 @@
             ], 
             "position": {
                 "left": 963.88330078125, 
-                "top": 657.8833312988281
+                "top": 657.88330078125
             }, 
             "post_job_actions": {
                 "ChangeDatatypeActionout_file1": {
@@ -842,22 +842,14 @@
                 }
             ], 
             "position": {
-                "left": 1123.38330078125, 
-                "top": 521.3833312988281
+                "left": 1099.11669921875, 
+                "top": 501.6166687011719
             }, 
-            "post_job_actions": {
-                "RenameDatasetActionoutput": {
-                    "action_arguments": {
-                        "newname": "Protein 1 positions nearby Protein 2"
-                    }, 
-                    "action_type": "RenameDatasetAction", 
-                    "output_name": "output"
-                }
-            }, 
+            "post_job_actions": {}, 
             "tool_errors": null, 
-            "tool_id": "toolshed.g2.bx.psu.edu/repos/devteam/intersect/gops_intersect_1/0.0.1", 
-            "tool_state": "{\"input2\": \"null\", \"__page__\": 0, \"input1\": \"null\", \"min\": \"\\\"1\\\"\", \"__rerun_remap_job_id__\": null, \"returntype\": \"\\\"\\\"\", \"chromInfo\": \"\\\"/usr/local/galaxy/galaxy-dist/tool-data/shared/ucsc/chrom/?.len\\\"\"}", 
-            "tool_version": "0.0.1", 
+            "tool_id": "toolshed.g2.bx.psu.edu/repos/devteam/intersect/gops_intersect_1/1.0.0", 
+            "tool_state": "{\"input2\": \"null\", \"__page__\": 0, \"input1\": \"null\", \"min\": \"\\\"1\\\"\", \"__rerun_remap_job_id__\": null, \"returntype\": \"\\\"\\\"\"}", 
+            "tool_version": "1.0.0", 
             "type": "tool", 
             "user_outputs": []
         }, 
@@ -961,5 +953,5 @@
             "user_outputs": []
         }
     }, 
-    "uuid": "6db7ece4-0473-4fc6-a156-105186ffee7b"
+    "uuid": "ea8b8757-5fcb-4451-b305-31db0e5349fd"
 }
\ No newline at end of file
--- a/repository_dependencies.xml	Tue Mar 17 09:40:46 2015 -0400
+++ b/repository_dependencies.xml	Tue Mar 17 10:00:21 2015 -0400
@@ -1,4 +1,6 @@
 <?xml version="1.0"?>
 <repositories description="This workflow requires the NCBI BLAST tools.">
-  <repository changeset_revision="2fe07f50a41e" name="ncbi_blast_plus" owner="devteam" toolshed="https://toolshed.g2.bx.psu.edu" />
+    <repository changeset_revision="2fe07f50a41e" name="ncbi_blast_plus" owner="devteam" toolshed="https://toolshed.g2.bx.psu.edu" />
+    <repository changeset_revision="77641d5731c8" name="intersect" owner="devteam" toolshed="https://toolshed.g2.bx.psu.edu" />
+    <repository changeset_revision="08a01b2ce4cd" name="column_maker" owner="devteam" toolshed="https://toolshed.g2.bx.psu.edu" />
 </repositories>