Mercurial > repos > bgruening > find_three_genes_located_nearby_workflow
changeset 1:12a1efdaeb5b draft
Uploaded
author | bgruening |
---|---|
date | Tue, 17 Mar 2015 10:00:21 -0400 |
parents | e42f2c5118ac |
children | 3620e8c84e1a |
files | find_three_genes_located_nearby.ga repository_dependencies.xml |
diffstat | 2 files changed, 18 insertions(+), 24 deletions(-) [+] |
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--- a/find_three_genes_located_nearby.ga Tue Mar 17 09:40:46 2015 -0400 +++ b/find_three_genes_located_nearby.ga Tue Mar 17 10:00:21 2015 -0400 @@ -371,7 +371,7 @@ } ], "position": { - "left": 768.38330078125, + "left": 768.3833312988281, "top": 386.3833312988281 }, "post_job_actions": { @@ -406,7 +406,7 @@ } ], "position": { - "left": 747.88330078125, + "left": 747.8833312988281, "top": 673.88330078125 }, "post_job_actions": { @@ -441,7 +441,7 @@ } ], "position": { - "left": 769.11669921875, + "left": 769.1166687011719, "top": 879.61669921875 }, "post_job_actions": { @@ -511,7 +511,7 @@ } ], "position": { - "left": 801.88330078125, + "left": 801.8833312988281, "top": 668.88330078125 }, "post_job_actions": { @@ -546,7 +546,7 @@ } ], "position": { - "left": 813.11669921875, + "left": 813.1166687011719, "top": 871.61669921875 }, "post_job_actions": { @@ -626,7 +626,7 @@ ], "position": { "left": 854.88330078125, - "top": 661.8833312988281 + "top": 661.88330078125 }, "post_job_actions": { "HideDatasetActionout_file1": { @@ -696,7 +696,7 @@ ], "position": { "left": 911.88330078125, - "top": 658.8833312988281 + "top": 658.88330078125 }, "post_job_actions": {}, "tool_errors": null, @@ -760,7 +760,7 @@ ], "position": { "left": 963.88330078125, - "top": 657.8833312988281 + "top": 657.88330078125 }, "post_job_actions": { "ChangeDatatypeActionout_file1": { @@ -842,22 +842,14 @@ } ], "position": { - "left": 1123.38330078125, - "top": 521.3833312988281 + "left": 1099.11669921875, + "top": 501.6166687011719 }, - "post_job_actions": { - "RenameDatasetActionoutput": { - "action_arguments": { - "newname": "Protein 1 positions nearby Protein 2" - }, - "action_type": "RenameDatasetAction", - "output_name": "output" - } - }, + "post_job_actions": {}, "tool_errors": null, - "tool_id": "toolshed.g2.bx.psu.edu/repos/devteam/intersect/gops_intersect_1/0.0.1", - "tool_state": "{\"input2\": \"null\", \"__page__\": 0, \"input1\": \"null\", \"min\": \"\\\"1\\\"\", \"__rerun_remap_job_id__\": null, \"returntype\": \"\\\"\\\"\", \"chromInfo\": \"\\\"/usr/local/galaxy/galaxy-dist/tool-data/shared/ucsc/chrom/?.len\\\"\"}", - "tool_version": "0.0.1", + "tool_id": "toolshed.g2.bx.psu.edu/repos/devteam/intersect/gops_intersect_1/1.0.0", + "tool_state": "{\"input2\": \"null\", \"__page__\": 0, \"input1\": \"null\", \"min\": \"\\\"1\\\"\", \"__rerun_remap_job_id__\": null, \"returntype\": \"\\\"\\\"\"}", + "tool_version": "1.0.0", "type": "tool", "user_outputs": [] }, @@ -961,5 +953,5 @@ "user_outputs": [] } }, - "uuid": "6db7ece4-0473-4fc6-a156-105186ffee7b" + "uuid": "ea8b8757-5fcb-4451-b305-31db0e5349fd" } \ No newline at end of file
--- a/repository_dependencies.xml Tue Mar 17 09:40:46 2015 -0400 +++ b/repository_dependencies.xml Tue Mar 17 10:00:21 2015 -0400 @@ -1,4 +1,6 @@ <?xml version="1.0"?> <repositories description="This workflow requires the NCBI BLAST tools."> - <repository changeset_revision="2fe07f50a41e" name="ncbi_blast_plus" owner="devteam" toolshed="https://toolshed.g2.bx.psu.edu" /> + <repository changeset_revision="2fe07f50a41e" name="ncbi_blast_plus" owner="devteam" toolshed="https://toolshed.g2.bx.psu.edu" /> + <repository changeset_revision="77641d5731c8" name="intersect" owner="devteam" toolshed="https://toolshed.g2.bx.psu.edu" /> + <repository changeset_revision="08a01b2ce4cd" name="column_maker" owner="devteam" toolshed="https://toolshed.g2.bx.psu.edu" /> </repositories>