Mercurial > repos > bgruening > graphicsmagick_image_convert
annotate convert.xml @ 6:eb09d7e6d727 draft
"planemo upload for repository https://github.com/bgruening/galaxytools/new/gm/tools/image_processing/image_processing/ commit 5f5be1307a70cae3149db449d81472079a9487fd"
author | bgruening |
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date | Mon, 25 Nov 2019 09:12:24 -0500 |
parents | 57e2503e6039 |
children | ff05b2c4263c |
rev | line source |
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57e2503e6039
"planemo upload for repository https://github.com/bgruening/galaxytools/new/gm/tools/image_processing/image_processing/ commit dfb826cf50d7a26f033ce3da12f7606de67add9c"
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1 <tool id="graphicsmagick_image_convert" name="Image Converter" version="@VERSION@+galaxy1"> |
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planemo upload for repository https://github.com/bgruening/galaxytools/new/gm/tools/image_processing/image_processing/ commit dd88ad4ff9d10d72ed60263da31b406074173853
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2 <description></description> |
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planemo upload for repository https://github.com/bgruening/galaxytools/new/gm/tools/image_processing/image_processing/ commit dd88ad4ff9d10d72ed60263da31b406074173853
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3 <macros> |
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planemo upload for repository https://github.com/bgruening/galaxytools/new/gm/tools/image_processing/image_processing/ commit dd88ad4ff9d10d72ed60263da31b406074173853
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4 <import>macros.xml</import> |
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planemo upload for repository https://github.com/bgruening/galaxytools/new/gm/tools/image_processing/image_processing/ commit dd88ad4ff9d10d72ed60263da31b406074173853
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5 </macros> |
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planemo upload for repository https://github.com/bgruening/galaxytools/new/gm/tools/image_processing/image_processing/ commit dd88ad4ff9d10d72ed60263da31b406074173853
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6 <expand macro="requirements" /> |
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planemo upload for repository https://github.com/bgruening/galaxytools/new/gm/tools/image_processing/image_processing/ commit dd88ad4ff9d10d72ed60263da31b406074173853
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7 <command detect_errors="aggressive"> |
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planemo upload for repository https://github.com/bgruening/galaxytools/new/gm/tools/image_processing/image_processing/ commit dd88ad4ff9d10d72ed60263da31b406074173853
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8 <![CDATA[ |
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planemo upload for repository https://github.com/bgruening/galaxytools/new/gm/tools/image_processing/image_processing/ commit dd88ad4ff9d10d72ed60263da31b406074173853
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9 ln -s '${input}' input.${input.ext} |
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planemo upload for repository https://github.com/bgruening/galaxytools/new/gm/tools/image_processing/image_processing/ commit dd88ad4ff9d10d72ed60263da31b406074173853
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10 && |
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planemo upload for repository https://github.com/bgruening/galaxytools/new/gm/tools/image_processing/image_processing/ commit 519fe7dd96d4fb063e57b0a40ab58dd4855b98af
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11 #if str($transformations) != 'None': |
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planemo upload for repository https://github.com/bgruening/galaxytools/new/gm/tools/image_processing/image_processing/ commit 4a5c3c370df53a00aded3eaae40f3a8e4a263385-dirty
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12 #set $trans_options = str($transformations).replace(',', ' ') |
c01226f0d828
planemo upload for repository https://github.com/bgruening/galaxytools/new/gm/tools/image_processing/image_processing/ commit 4a5c3c370df53a00aded3eaae40f3a8e4a263385-dirty
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13 #else: |
c01226f0d828
planemo upload for repository https://github.com/bgruening/galaxytools/new/gm/tools/image_processing/image_processing/ commit 4a5c3c370df53a00aded3eaae40f3a8e4a263385-dirty
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14 #set $trans_options = '' |
c01226f0d828
planemo upload for repository https://github.com/bgruening/galaxytools/new/gm/tools/image_processing/image_processing/ commit 4a5c3c370df53a00aded3eaae40f3a8e4a263385-dirty
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15 #end if |
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planemo upload for repository https://github.com/bgruening/galaxytools/new/gm/tools/image_processing/image_processing/ commit dd88ad4ff9d10d72ed60263da31b406074173853
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16 |
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57e2503e6039
"planemo upload for repository https://github.com/bgruening/galaxytools/new/gm/tools/image_processing/image_processing/ commit dfb826cf50d7a26f033ce3da12f7606de67add9c"
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17 gm convert -resize ${resize}%x $trans_options input.${input.ext} temp.${output_format} |
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planemo upload for repository https://github.com/bgruening/galaxytools/new/gm/tools/image_processing/image_processing/ commit dd88ad4ff9d10d72ed60263da31b406074173853
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18 && |
3d3e4a1bd21e
planemo upload for repository https://github.com/bgruening/galaxytools/new/gm/tools/image_processing/image_processing/ commit dd88ad4ff9d10d72ed60263da31b406074173853
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19 mv temp.${output_format} '${output}' |
3d3e4a1bd21e
planemo upload for repository https://github.com/bgruening/galaxytools/new/gm/tools/image_processing/image_processing/ commit dd88ad4ff9d10d72ed60263da31b406074173853
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20 ]]> |
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planemo upload for repository https://github.com/bgruening/galaxytools/new/gm/tools/image_processing/image_processing/ commit dd88ad4ff9d10d72ed60263da31b406074173853
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21 </command> |
3d3e4a1bd21e
planemo upload for repository https://github.com/bgruening/galaxytools/new/gm/tools/image_processing/image_processing/ commit dd88ad4ff9d10d72ed60263da31b406074173853
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22 <inputs> |
3d3e4a1bd21e
planemo upload for repository https://github.com/bgruening/galaxytools/new/gm/tools/image_processing/image_processing/ commit dd88ad4ff9d10d72ed60263da31b406074173853
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23 <param format="jpg,png,bmp,gif,svg,eps,tiff,xcf" name="input" type="data" label="Image to convert" /> |
3d3e4a1bd21e
planemo upload for repository https://github.com/bgruening/galaxytools/new/gm/tools/image_processing/image_processing/ commit dd88ad4ff9d10d72ed60263da31b406074173853
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24 <param name="transformations" multiple="true" type="select" display="checkboxes" label="Transformations"> |
3d3e4a1bd21e
planemo upload for repository https://github.com/bgruening/galaxytools/new/gm/tools/image_processing/image_processing/ commit dd88ad4ff9d10d72ed60263da31b406074173853
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25 <option value="-flip">flip vertically</option> |
3d3e4a1bd21e
planemo upload for repository https://github.com/bgruening/galaxytools/new/gm/tools/image_processing/image_processing/ commit dd88ad4ff9d10d72ed60263da31b406074173853
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26 <option value="-flop">flip horizontally</option> |
3d3e4a1bd21e
planemo upload for repository https://github.com/bgruening/galaxytools/new/gm/tools/image_processing/image_processing/ commit dd88ad4ff9d10d72ed60263da31b406074173853
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27 <option value="-rotate 90">rotate 90 degree to the right</option> |
3d3e4a1bd21e
planemo upload for repository https://github.com/bgruening/galaxytools/new/gm/tools/image_processing/image_processing/ commit dd88ad4ff9d10d72ed60263da31b406074173853
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28 <option value="-rotate 270">rotate 90 degree to the left</option> |
3d3e4a1bd21e
planemo upload for repository https://github.com/bgruening/galaxytools/new/gm/tools/image_processing/image_processing/ commit dd88ad4ff9d10d72ed60263da31b406074173853
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29 <option value="-rotate 180">rotate 180 degree</option> |
3d3e4a1bd21e
planemo upload for repository https://github.com/bgruening/galaxytools/new/gm/tools/image_processing/image_processing/ commit dd88ad4ff9d10d72ed60263da31b406074173853
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30 </param> |
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57e2503e6039
"planemo upload for repository https://github.com/bgruening/galaxytools/new/gm/tools/image_processing/image_processing/ commit dfb826cf50d7a26f033ce3da12f7606de67add9c"
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31 <param name="resize" type="float" value="100" label="Resize (%)" min="0"/> |
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planemo upload for repository https://github.com/bgruening/galaxytools/new/gm/tools/image_processing/image_processing/ commit dd88ad4ff9d10d72ed60263da31b406074173853
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32 <param name="output_format" type="select" label="Output Format"> |
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57e2503e6039
"planemo upload for repository https://github.com/bgruening/galaxytools/new/gm/tools/image_processing/image_processing/ commit dfb826cf50d7a26f033ce3da12f7606de67add9c"
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33 <option value="jpg">jpg</option> |
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planemo upload for repository https://github.com/bgruening/galaxytools/new/gm/tools/image_processing/image_processing/ commit dd88ad4ff9d10d72ed60263da31b406074173853
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34 <option value="png">png</option> |
3d3e4a1bd21e
planemo upload for repository https://github.com/bgruening/galaxytools/new/gm/tools/image_processing/image_processing/ commit dd88ad4ff9d10d72ed60263da31b406074173853
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35 <option value="bmp">bmp</option> |
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planemo upload for repository https://github.com/bgruening/galaxytools/new/gm/tools/image_processing/image_processing/ commit dd88ad4ff9d10d72ed60263da31b406074173853
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36 <option value="gif">gif</option> |
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planemo upload for repository https://github.com/bgruening/galaxytools/new/gm/tools/image_processing/image_processing/ commit dd88ad4ff9d10d72ed60263da31b406074173853
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37 <option value="svg">svg</option> |
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planemo upload for repository https://github.com/bgruening/galaxytools/new/gm/tools/image_processing/image_processing/ commit dd88ad4ff9d10d72ed60263da31b406074173853
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38 <option value="eps">eps</option> |
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eb09d7e6d727
"planemo upload for repository https://github.com/bgruening/galaxytools/new/gm/tools/image_processing/image_processing/ commit 5f5be1307a70cae3149db449d81472079a9487fd"
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39 <option value="pdf">pdf</option> |
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planemo upload for repository https://github.com/bgruening/galaxytools/new/gm/tools/image_processing/image_processing/ commit dd88ad4ff9d10d72ed60263da31b406074173853
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40 <option value="tiff">tiff</option> |
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planemo upload for repository https://github.com/bgruening/galaxytools/new/gm/tools/image_processing/image_processing/ commit dd88ad4ff9d10d72ed60263da31b406074173853
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41 </param> |
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planemo upload for repository https://github.com/bgruening/galaxytools/new/gm/tools/image_processing/image_processing/ commit dd88ad4ff9d10d72ed60263da31b406074173853
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42 </inputs> |
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planemo upload for repository https://github.com/bgruening/galaxytools/new/gm/tools/image_processing/image_processing/ commit dd88ad4ff9d10d72ed60263da31b406074173853
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43 <outputs> |
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planemo upload for repository https://github.com/bgruening/galaxytools/new/gm/tools/image_processing/image_processing/ commit dd88ad4ff9d10d72ed60263da31b406074173853
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44 <data format="png" name="output"> |
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planemo upload for repository https://github.com/bgruening/galaxytools/new/gm/tools/image_processing/image_processing/ commit dd88ad4ff9d10d72ed60263da31b406074173853
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45 <change_format> |
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57e2503e6039
"planemo upload for repository https://github.com/bgruening/galaxytools/new/gm/tools/image_processing/image_processing/ commit dfb826cf50d7a26f033ce3da12f7606de67add9c"
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46 <when input="output_format" value="jpg" format="jpg" /> |
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planemo upload for repository https://github.com/bgruening/galaxytools/new/gm/tools/image_processing/image_processing/ commit dd88ad4ff9d10d72ed60263da31b406074173853
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47 <when input="output_format" value="png" format="png" /> |
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planemo upload for repository https://github.com/bgruening/galaxytools/new/gm/tools/image_processing/image_processing/ commit dd88ad4ff9d10d72ed60263da31b406074173853
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48 <when input="output_format" value="bmp" format="bmp" /> |
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planemo upload for repository https://github.com/bgruening/galaxytools/new/gm/tools/image_processing/image_processing/ commit dd88ad4ff9d10d72ed60263da31b406074173853
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49 <when input="output_format" value="gif" format="gif" /> |
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planemo upload for repository https://github.com/bgruening/galaxytools/new/gm/tools/image_processing/image_processing/ commit dd88ad4ff9d10d72ed60263da31b406074173853
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50 <when input="output_format" value="svg" format="svg" /> |
3d3e4a1bd21e
planemo upload for repository https://github.com/bgruening/galaxytools/new/gm/tools/image_processing/image_processing/ commit dd88ad4ff9d10d72ed60263da31b406074173853
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51 <when input="output_format" value="eps" format="eps" /> |
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eb09d7e6d727
"planemo upload for repository https://github.com/bgruening/galaxytools/new/gm/tools/image_processing/image_processing/ commit 5f5be1307a70cae3149db449d81472079a9487fd"
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52 <when input="output_format" value="pdf" format="pdf" /> |
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planemo upload for repository https://github.com/bgruening/galaxytools/new/gm/tools/image_processing/image_processing/ commit dd88ad4ff9d10d72ed60263da31b406074173853
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53 <when input="output_format" value="tiff" format="tiff" /> |
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planemo upload for repository https://github.com/bgruening/galaxytools/new/gm/tools/image_processing/image_processing/ commit dd88ad4ff9d10d72ed60263da31b406074173853
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54 </change_format> |
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planemo upload for repository https://github.com/bgruening/galaxytools/new/gm/tools/image_processing/image_processing/ commit dd88ad4ff9d10d72ed60263da31b406074173853
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55 </data> |
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planemo upload for repository https://github.com/bgruening/galaxytools/new/gm/tools/image_processing/image_processing/ commit dd88ad4ff9d10d72ed60263da31b406074173853
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56 </outputs> |
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planemo upload for repository https://github.com/bgruening/galaxytools/new/gm/tools/image_processing/image_processing/ commit dd88ad4ff9d10d72ed60263da31b406074173853
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57 <tests> |
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planemo upload for repository https://github.com/bgruening/galaxytools/new/gm/tools/image_processing/image_processing/ commit dd88ad4ff9d10d72ed60263da31b406074173853
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58 <test> |
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planemo upload for repository https://github.com/bgruening/galaxytools/new/gm/tools/image_processing/image_processing/ commit dd88ad4ff9d10d72ed60263da31b406074173853
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59 <param name="input" value="donald.jpg" /> |
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planemo upload for repository https://github.com/bgruening/galaxytools/new/gm/tools/image_processing/image_processing/ commit dd88ad4ff9d10d72ed60263da31b406074173853
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60 <param name="output_format" value="png" /> |
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planemo upload for repository https://github.com/bgruening/galaxytools/new/gm/tools/image_processing/image_processing/ commit dd88ad4ff9d10d72ed60263da31b406074173853
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61 <param name="transformations" value="-flip" /> |
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57e2503e6039
"planemo upload for repository https://github.com/bgruening/galaxytools/new/gm/tools/image_processing/image_processing/ commit dfb826cf50d7a26f033ce3da12f7606de67add9c"
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62 <param name="resize" value="50" /> |
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planemo upload for repository https://github.com/bgruening/galaxytools/new/gm/tools/image_processing/image_processing/ commit dd88ad4ff9d10d72ed60263da31b406074173853
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63 <output name="output" file="result_image_convert_1.png" compare="sim_size" delta="20000" /> |
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planemo upload for repository https://github.com/bgruening/galaxytools/new/gm/tools/image_processing/image_processing/ commit dd88ad4ff9d10d72ed60263da31b406074173853
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64 </test> |
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planemo upload for repository https://github.com/bgruening/galaxytools/new/gm/tools/image_processing/image_processing/ commit dd88ad4ff9d10d72ed60263da31b406074173853
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65 </tests> |
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planemo upload for repository https://github.com/bgruening/galaxytools/new/gm/tools/image_processing/image_processing/ commit dd88ad4ff9d10d72ed60263da31b406074173853
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66 <help> |
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planemo upload for repository https://github.com/bgruening/galaxytools/new/gm/tools/image_processing/image_processing/ commit dd88ad4ff9d10d72ed60263da31b406074173853
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67 <![CDATA[ |
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planemo upload for repository https://github.com/bgruening/galaxytools/new/gm/tools/image_processing/image_processing/ commit dd88ad4ff9d10d72ed60263da31b406074173853
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68 |
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planemo upload for repository https://github.com/bgruening/galaxytools/new/gm/tools/image_processing/image_processing/ commit dd88ad4ff9d10d72ed60263da31b406074173853
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69 **What it does** |
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planemo upload for repository https://github.com/bgruening/galaxytools/new/gm/tools/image_processing/image_processing/ commit dd88ad4ff9d10d72ed60263da31b406074173853
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70 |
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planemo upload for repository https://github.com/bgruening/galaxytools/new/gm/tools/image_processing/image_processing/ commit dd88ad4ff9d10d72ed60263da31b406074173853
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71 This tool converts an image into another format. You can also do some transformations like flipping or rotating. |
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planemo upload for repository https://github.com/bgruening/galaxytools/new/gm/tools/image_processing/image_processing/ commit dd88ad4ff9d10d72ed60263da31b406074173853
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72 Here you can see, how -flip behaves: |
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planemo upload for repository https://github.com/bgruening/galaxytools/new/gm/tools/image_processing/image_processing/ commit dd88ad4ff9d10d72ed60263da31b406074173853
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73 |
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planemo upload for repository https://github.com/bgruening/galaxytools/new/gm/tools/image_processing/image_processing/ commit dd88ad4ff9d10d72ed60263da31b406074173853
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74 Input: |
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planemo upload for repository https://github.com/bgruening/galaxytools/new/gm/tools/image_processing/image_processing/ commit dd88ad4ff9d10d72ed60263da31b406074173853
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75 |
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planemo upload for repository https://github.com/bgruening/galaxytools/new/gm/tools/image_processing/image_processing/ commit dd88ad4ff9d10d72ed60263da31b406074173853
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76 .. image:: $PATH_TO_IMAGES/donald.jpg |
3d3e4a1bd21e
planemo upload for repository https://github.com/bgruening/galaxytools/new/gm/tools/image_processing/image_processing/ commit dd88ad4ff9d10d72ed60263da31b406074173853
bgruening
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77 |
3d3e4a1bd21e
planemo upload for repository https://github.com/bgruening/galaxytools/new/gm/tools/image_processing/image_processing/ commit dd88ad4ff9d10d72ed60263da31b406074173853
bgruening
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78 Output: |
3d3e4a1bd21e
planemo upload for repository https://github.com/bgruening/galaxytools/new/gm/tools/image_processing/image_processing/ commit dd88ad4ff9d10d72ed60263da31b406074173853
bgruening
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79 |
3d3e4a1bd21e
planemo upload for repository https://github.com/bgruening/galaxytools/new/gm/tools/image_processing/image_processing/ commit dd88ad4ff9d10d72ed60263da31b406074173853
bgruening
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80 .. image:: $PATH_TO_IMAGES/donald.png |
3d3e4a1bd21e
planemo upload for repository https://github.com/bgruening/galaxytools/new/gm/tools/image_processing/image_processing/ commit dd88ad4ff9d10d72ed60263da31b406074173853
bgruening
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81 |
3d3e4a1bd21e
planemo upload for repository https://github.com/bgruening/galaxytools/new/gm/tools/image_processing/image_processing/ commit dd88ad4ff9d10d72ed60263da31b406074173853
bgruening
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82 ]]> |
3d3e4a1bd21e
planemo upload for repository https://github.com/bgruening/galaxytools/new/gm/tools/image_processing/image_processing/ commit dd88ad4ff9d10d72ed60263da31b406074173853
bgruening
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83 </help> |
3d3e4a1bd21e
planemo upload for repository https://github.com/bgruening/galaxytools/new/gm/tools/image_processing/image_processing/ commit dd88ad4ff9d10d72ed60263da31b406074173853
bgruening
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84 <expand macro="citations" /> |
3d3e4a1bd21e
planemo upload for repository https://github.com/bgruening/galaxytools/new/gm/tools/image_processing/image_processing/ commit dd88ad4ff9d10d72ed60263da31b406074173853
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85 </tool> |